Protein–RNA interactions for Protein: Q9C0J9

BHLHE41, Class E basic helix-loop-helix protein 41, humanhuman

Predicted RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BHLHE41Q9C0J9 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.62□□□□□ -1.67
BHLHE41Q9C0J9 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.62□□□□□ -1.67
BHLHE41Q9C0J9 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.61□□□□□ -1.67
BHLHE41Q9C0J9 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
BHLHE41Q9C0J9 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC4.61□□□□□ -1.67
BHLHE41Q9C0J9 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
BHLHE41Q9C0J9 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
BHLHE41Q9C0J9 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
BHLHE41Q9C0J9 snoU2_19.2-201ENST00000363024 80 ntBASIC4.61□□□□□ -1.67
BHLHE41Q9C0J9 RNA5SP428-201ENST00000365129 132 ntBASIC4.61□□□□□ -1.67
BHLHE41Q9C0J9 RNA5SP455-201ENST00000365190 119 ntBASIC4.61□□□□□ -1.67
BHLHE41Q9C0J9 SNORD115-46-201ENST00000390982 71 ntBASIC4.61□□□□□ -1.67
BHLHE41Q9C0J9 AL357515.1-201ENST00000402967 542 ntBASIC4.61□□□□□ -1.67
BHLHE41Q9C0J9 AL592291.1-201ENST00000403830 352 ntBASIC4.61□□□□□ -1.67
BHLHE41Q9C0J9 RNA5SP36-201ENST00000410197 133 ntBASIC4.61□□□□□ -1.67
BHLHE41Q9C0J9 TBCAP2-201ENST00000416175 326 ntBASIC4.61□□□□□ -1.67
BHLHE41Q9C0J9 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
BHLHE41Q9C0J9 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.61□□□□□ -1.67
BHLHE41Q9C0J9 RPL27AP8-201ENST00000424277 446 ntBASIC4.61□□□□□ -1.67
BHLHE41Q9C0J9 RPL23AP22-201ENST00000437556 453 ntBASIC4.61□□□□□ -1.67
BHLHE41Q9C0J9 RPL12P3-201ENST00000440080 396 ntBASIC4.61□□□□□ -1.67
BHLHE41Q9C0J9 H2AFZP5-201ENST00000446960 382 ntBASIC4.61□□□□□ -1.67
BHLHE41Q9C0J9 RN7SL319P-201ENST00000480656 221 ntBASIC4.61□□□□□ -1.67
BHLHE41Q9C0J9 RPSAP50-201ENST00000481955 852 ntBASIC4.61□□□□□ -1.67
BHLHE41Q9C0J9 RNU6-406P-201ENST00000516470 107 ntBASIC4.61□□□□□ -1.67
BHLHE41Q9C0J9 MIR2355-201ENST00000517199 87 ntBASIC4.61□□□□□ -1.67
BHLHE41Q9C0J9 RNU6-709P-201ENST00000517257 104 ntBASIC4.61□□□□□ -1.67
BHLHE41Q9C0J9 MED28P6-201ENST00000558776 231 ntBASIC4.61□□□□□ -1.67
BHLHE41Q9C0J9 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.61□□□□□ -1.67
BHLHE41Q9C0J9 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.61□□□□□ -1.67
BHLHE41Q9C0J9 AC024940.4-201ENST00000605507 246 ntBASIC4.61□□□□□ -1.67
BHLHE41Q9C0J9 BX284668.6-201ENST00000606899 438 ntBASIC4.61□□□□□ -1.67
BHLHE41Q9C0J9 AC068870.2-201ENST00000620635 389 ntBASIC4.61□□□□□ -1.67
BHLHE41Q9C0J9 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC4.61□□□□□ -1.67
BHLHE41Q9C0J9 AL450472.1-202ENST00000637286 180 ntBASIC4.61□□□□□ -1.67
BHLHE41Q9C0J9 LINC02555-201ENST00000563933 1951 ntBASIC4.61□□□□□ -1.67
BHLHE41Q9C0J9 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.61□□□□□ -1.67
BHLHE41Q9C0J9 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.6□□□□□ -1.67
BHLHE41Q9C0J9 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.6□□□□□ -1.67
BHLHE41Q9C0J9 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
BHLHE41Q9C0J9 AL356489.2-201ENST00000566968 3528 ntBASIC4.6□□□□□ -1.67
BHLHE41Q9C0J9 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
BHLHE41Q9C0J9 Y_RNA.143-201ENST00000363520 106 ntBASIC4.6□□□□□ -1.67
BHLHE41Q9C0J9 Y_RNA.150-201ENST00000363562 102 ntBASIC4.6□□□□□ -1.67
BHLHE41Q9C0J9 RNU6-335P-201ENST00000364563 113 ntBASIC4.6□□□□□ -1.67
BHLHE41Q9C0J9 Y_RNA.274-201ENST00000364714 101 ntBASIC4.6□□□□□ -1.67
BHLHE41Q9C0J9 Y_RNA.277-201ENST00000364754 102 ntBASIC4.6□□□□□ -1.67
BHLHE41Q9C0J9 RNY3P4-201ENST00000384428 101 ntBASIC4.6□□□□□ -1.67
BHLHE41Q9C0J9 MIR124-3-201ENST00000384866 87 ntBASIC4.6□□□□□ -1.67
BHLHE41Q9C0J9 MIR585-201ENST00000384887 94 ntBASIC4.6□□□□□ -1.67
BHLHE41Q9C0J9 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
BHLHE41Q9C0J9 SNORA40C-201ENST00000391285 128 ntBASIC4.6□□□□□ -1.67
BHLHE41Q9C0J9 MRPL35P1-201ENST00000404272 572 ntBASIC4.6□□□□□ -1.67
BHLHE41Q9C0J9 RNU2-14P-201ENST00000411053 191 ntBASIC4.6□□□□□ -1.67
BHLHE41Q9C0J9 TMEM167AP1-201ENST00000423409 219 ntBASIC4.6□□□□□ -1.67
BHLHE41Q9C0J9 AL590383.1-201ENST00000428602 75 ntBASIC4.6□□□□□ -1.67
BHLHE41Q9C0J9 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC4.6□□□□□ -1.67
BHLHE41Q9C0J9 AL078601.1-201ENST00000444542 271 ntBASIC4.6□□□□□ -1.67
BHLHE41Q9C0J9 AC013470.1-201ENST00000453438 462 ntBASIC4.6□□□□□ -1.67
BHLHE41Q9C0J9 ANP32BP2-201ENST00000454525 545 ntBASIC4.6□□□□□ -1.67
BHLHE41Q9C0J9 RPS18P6-201ENST00000476880 458 ntBASIC4.6□□□□□ -1.67
BHLHE41Q9C0J9 RN7SL558P-201ENST00000497468 299 ntBASIC4.6□□□□□ -1.67
BHLHE41Q9C0J9 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC4.6□□□□□ -1.67
BHLHE41Q9C0J9 LINC02122-201ENST00000511395 577 ntTSL 4 BASIC4.6□□□□□ -1.67
BHLHE41Q9C0J9 RNU6-572P-201ENST00000516724 80 ntBASIC4.6□□□□□ -1.67
BHLHE41Q9C0J9 IGHVII-53-1-201ENST00000519538 255 ntBASIC4.6□□□□□ -1.67
BHLHE41Q9C0J9 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC4.6□□□□□ -1.67
BHLHE41Q9C0J9 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.6□□□□□ -1.67
BHLHE41Q9C0J9 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC4.6□□□□□ -1.67
BHLHE41Q9C0J9 AC010186.2-204ENST00000537668 439 ntBASIC4.6□□□□□ -1.67
BHLHE41Q9C0J9 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC4.6□□□□□ -1.67
BHLHE41Q9C0J9 AC023575.1-201ENST00000580510 358 ntBASIC4.6□□□□□ -1.67
BHLHE41Q9C0J9 MIR4691-201ENST00000583764 85 ntBASIC4.6□□□□□ -1.67
BHLHE41Q9C0J9 B3GNTL1P2-201ENST00000603673 288 ntBASIC4.6□□□□□ -1.67
BHLHE41Q9C0J9 AC005046.1-201ENST00000608515 625 ntBASIC4.6□□□□□ -1.67
BHLHE41Q9C0J9 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC4.6□□□□□ -1.67
BHLHE41Q9C0J9 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
BHLHE41Q9C0J9 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
BHLHE41Q9C0J9 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.6□□□□□ -1.67
BHLHE41Q9C0J9 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
BHLHE41Q9C0J9 DDX18P3-201ENST00000404856 2007 ntBASIC4.6□□□□□ -1.67
BHLHE41Q9C0J9 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
BHLHE41Q9C0J9 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC4.6□□□□□ -1.67
BHLHE41Q9C0J9 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC4.6□□□□□ -1.67
BHLHE41Q9C0J9 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
BHLHE41Q9C0J9 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
BHLHE41Q9C0J9 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
BHLHE41Q9C0J9 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
BHLHE41Q9C0J9 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC4.59□□□□□ -1.67
BHLHE41Q9C0J9 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
BHLHE41Q9C0J9 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
BHLHE41Q9C0J9 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
BHLHE41Q9C0J9 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.59□□□□□ -1.67
BHLHE41Q9C0J9 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
BHLHE41Q9C0J9 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
BHLHE41Q9C0J9 Y_RNA.180-201ENST00000363867 113 ntBASIC4.59□□□□□ -1.67
BHLHE41Q9C0J9 RNU6-741P-201ENST00000383889 107 ntBASIC4.59□□□□□ -1.67
BHLHE41Q9C0J9 RNU6-166P-201ENST00000384371 107 ntBASIC4.59□□□□□ -1.67
BHLHE41Q9C0J9 AL645733.1-201ENST00000402250 217 ntBASIC4.59□□□□□ -1.67
BHLHE41Q9C0J9 NDUFB4P7-201ENST00000423198 363 ntBASIC4.59□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 132.5 ms