Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 HAUS6P2-201ENST00000433254 2404 ntBASIC1.31□□□□□ -2.2
ABCA3Q99758 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC1.31□□□□□ -2.2
ABCA3Q99758 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC1.31□□□□□ -2.2
ABCA3Q99758 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC1.31□□□□□ -2.2
ABCA3Q99758 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC1.31□□□□□ -2.2
ABCA3Q99758 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC1.31□□□□□ -2.2
ABCA3Q99758 MTATP6P7-201ENST00000453315 681 ntBASIC1.31□□□□□ -2.2
ABCA3Q99758 AC087884.1-201ENST00000469738 328 ntBASIC1.31□□□□□ -2.2
ABCA3Q99758 AC104689.1-201ENST00000473356 768 ntBASIC1.31□□□□□ -2.2
ABCA3Q99758 AC111193.1-201ENST00000504097 155 ntBASIC1.31□□□□□ -2.2
ABCA3Q99758 COL6A4P2-205ENST00000509855 506 ntBASIC1.31□□□□□ -2.2
ABCA3Q99758 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC1.31□□□□□ -2.2
ABCA3Q99758 MTCYBP23-201ENST00000558717 1102 ntBASIC1.31□□□□□ -2.2
ABCA3Q99758 MED28P6-201ENST00000558776 231 ntBASIC1.31□□□□□ -2.2
ABCA3Q99758 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.31□□□□□ -2.2
ABCA3Q99758 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
ABCA3Q99758 MIR924-201ENST00000638017 53 ntBASIC1.31□□□□□ -2.2
ABCA3Q99758 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC1.31□□□□□ -2.2
ABCA3Q99758 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC1.3□□□□□ -2.2
ABCA3Q99758 RNU1-62P-201ENST00000362599 164 ntBASIC1.3□□□□□ -2.2
ABCA3Q99758 RNU6-1243P-201ENST00000364028 107 ntBASIC1.3□□□□□ -2.2
ABCA3Q99758 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC1.3□□□□□ -2.2
ABCA3Q99758 MIR493-201ENST00000385254 89 ntBASIC1.3□□□□□ -2.2
ABCA3Q99758 RPS3AP24-201ENST00000407896 734 ntBASIC1.3□□□□□ -2.2
ABCA3Q99758 RN7SKP158-201ENST00000410453 326 ntBASIC1.3□□□□□ -2.2
ABCA3Q99758 RN7SKP200-201ENST00000410564 320 ntBASIC1.3□□□□□ -2.2
ABCA3Q99758 VN1R36P-201ENST00000414936 291 ntBASIC1.3□□□□□ -2.2
ABCA3Q99758 AL359385.1-201ENST00000456509 365 ntBASIC1.3□□□□□ -2.2
ABCA3Q99758 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC1.3□□□□□ -2.2
ABCA3Q99758 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC1.3□□□□□ -2.2
ABCA3Q99758 RNU6-1308P-201ENST00000516817 103 ntBASIC1.3□□□□□ -2.2
ABCA3Q99758 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC1.3□□□□□ -2.2
ABCA3Q99758 DEFB108E-201ENST00000524692 240 ntBASIC1.3□□□□□ -2.2
ABCA3Q99758 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC1.3□□□□□ -2.2
ABCA3Q99758 7SK.7-201ENST00000603504 247 ntBASIC1.3□□□□□ -2.2
ABCA3Q99758 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
ABCA3Q99758 RNU5D-1-201ENST00000363299 116 ntBASIC1.29□□□□□ -2.2
ABCA3Q99758 SNORA16B-201ENST00000364674 135 ntBASIC1.29□□□□□ -2.2
ABCA3Q99758 HMGB1P49-201ENST00000418882 569 ntBASIC1.29□□□□□ -2.2
ABCA3Q99758 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC1.29□□□□□ -2.2
ABCA3Q99758 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.29□□□□□ -2.2
ABCA3Q99758 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.29□□□□□ -2.2
ABCA3Q99758 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC1.29□□□□□ -2.2
ABCA3Q99758 RPL31P53-201ENST00000457065 348 ntBASIC1.29□□□□□ -2.2
ABCA3Q99758 RPS23P4-201ENST00000487908 423 ntBASIC1.29□□□□□ -2.2
ABCA3Q99758 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
ABCA3Q99758 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC1.29□□□□□ -2.2
ABCA3Q99758 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC1.29□□□□□ -2.2
ABCA3Q99758 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC1.29□□□□□ -2.2
ABCA3Q99758 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC1.29□□□□□ -2.2
ABCA3Q99758 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.29□□□□□ -2.2
ABCA3Q99758 MIR676-201ENST00000390702 67 ntBASIC1.29□□□□□ -2.2
ABCA3Q99758 AL591704.2-201ENST00000421658 181 ntBASIC1.29□□□□□ -2.2
ABCA3Q99758 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC1.29□□□□□ -2.2
ABCA3Q99758 RPS29P23-201ENST00000458635 123 ntBASIC1.29□□□□□ -2.2
ABCA3Q99758 AL121769.1-201ENST00000469473 401 ntBASIC1.29□□□□□ -2.2
ABCA3Q99758 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC1.29□□□□□ -2.2
ABCA3Q99758 AC016065.2-201ENST00000514530 444 ntBASIC1.29□□□□□ -2.2
ABCA3Q99758 MIR4698-201ENST00000577795 80 ntBASIC1.29□□□□□ -2.2
ABCA3Q99758 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC1.29□□□□□ -2.2
ABCA3Q99758 AL512605.2-201ENST00000592972 256 ntBASIC1.29□□□□□ -2.2
ABCA3Q99758 FAM71BP1-201ENST00000604431 523 ntBASIC1.29□□□□□ -2.2
ABCA3Q99758 AC135507.1-201ENST00000607214 561 ntBASIC1.29□□□□□ -2.2
ABCA3Q99758 AC103710.4-201ENST00000609301 899 ntBASIC1.29□□□□□ -2.2
ABCA3Q99758 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
ABCA3Q99758 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC1.29□□□□□ -2.2
ABCA3Q99758 ZNF702P-202ENST00000434269 1966 ntBASIC1.28□□□□□ -2.2
ABCA3Q99758 AC123912.3-201ENST00000600907 1367 ntBASIC1.28□□□□□ -2.2
ABCA3Q99758 AC080100.1-201ENST00000624239 5356 ntBASIC1.28□□□□□ -2.2
ABCA3Q99758 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC1.28□□□□□ -2.2
ABCA3Q99758 PTGES3P2-201ENST00000407942 482 ntBASIC1.28□□□□□ -2.2
ABCA3Q99758 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.28□□□□□ -2.2
ABCA3Q99758 OR51A5P-201ENST00000415429 942 ntBASIC1.28□□□□□ -2.2
ABCA3Q99758 CBX3P6-201ENST00000430257 527 ntBASIC1.28□□□□□ -2.2
ABCA3Q99758 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC1.28□□□□□ -2.2
ABCA3Q99758 AC004022.1-201ENST00000447766 1066 ntBASIC1.28□□□□□ -2.2
ABCA3Q99758 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC1.28□□□□□ -2.2
ABCA3Q99758 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC1.28□□□□□ -2.2
ABCA3Q99758 RNU6-420P-201ENST00000458780 107 ntBASIC1.28□□□□□ -2.2
ABCA3Q99758 PABPC1P3-201ENST00000469174 459 ntBASIC1.28□□□□□ -2.2
ABCA3Q99758 AC026801.1-201ENST00000497178 464 ntBASIC1.28□□□□□ -2.2
ABCA3Q99758 AC103833.1-201ENST00000517442 172 ntBASIC1.28□□□□□ -2.2
ABCA3Q99758 AC008562.1-201ENST00000521763 330 ntBASIC1.28□□□□□ -2.2
ABCA3Q99758 AP004247.1-201ENST00000531556 1289 ntBASIC1.28□□□□□ -2.2
ABCA3Q99758 CYCSP2-201ENST00000558168 301 ntBASIC1.28□□□□□ -2.2
ABCA3Q99758 LINC00933-203ENST00000559812 219 ntBASIC1.28□□□□□ -2.2
ABCA3Q99758 FAM60BP-201ENST00000578364 658 ntBASIC1.28□□□□□ -2.2
ABCA3Q99758 AC090970.3-201ENST00000612566 866 ntBASIC1.28□□□□□ -2.2
ABCA3Q99758 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC1.28□□□□□ -2.2
ABCA3Q99758 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC1.27□□□□□ -2.21
ABCA3Q99758 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.27□□□□□ -2.21
ABCA3Q99758 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.27□□□□□ -2.21
ABCA3Q99758 RNA5SP258-201ENST00000362750 119 ntBASIC1.27□□□□□ -2.21
ABCA3Q99758 MIR934-201ENST00000401241 83 ntBASIC1.27□□□□□ -2.21
ABCA3Q99758 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC1.27□□□□□ -2.21
ABCA3Q99758 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC1.27□□□□□ -2.21
ABCA3Q99758 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC1.27□□□□□ -2.21
ABCA3Q99758 AP000949.1-201ENST00000438328 629 ntBASIC1.27□□□□□ -2.21
ABCA3Q99758 AC016691.1-201ENST00000441321 413 ntBASIC1.27□□□□□ -2.21
ABCA3Q99758 RPL23AP6-201ENST00000446637 472 ntBASIC1.27□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms