Protein–RNA interactions for Protein: Q96PX6

CCDC85A, Coiled-coil domain-containing protein 85A, humanhuman

Predicted RBP Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85AQ96PX6 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC5.54□□□□□ -1.52
CCDC85AQ96PX6 FTX_2.1-201ENST00000618816 94 ntBASIC5.54□□□□□ -1.52
CCDC85AQ96PX6 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CCDC85AQ96PX6 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.54□□□□□ -1.52
CCDC85AQ96PX6 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CCDC85AQ96PX6 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CCDC85AQ96PX6 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.54□□□□□ -1.52
CCDC85AQ96PX6 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC5.54□□□□□ -1.52
CCDC85AQ96PX6 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC5.53□□□□□ -1.52
CCDC85AQ96PX6 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
CCDC85AQ96PX6 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC5.53□□□□□ -1.52
CCDC85AQ96PX6 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC5.53□□□□□ -1.52
CCDC85AQ96PX6 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC5.53□□□□□ -1.52
CCDC85AQ96PX6 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CCDC85AQ96PX6 SNORD27-201ENST00000363981 72 ntBASIC5.53□□□□□ -1.52
CCDC85AQ96PX6 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC5.53□□□□□ -1.52
CCDC85AQ96PX6 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC5.53□□□□□ -1.52
CCDC85AQ96PX6 RNU2-25P-201ENST00000411041 191 ntBASIC5.53□□□□□ -1.52
CCDC85AQ96PX6 RPS20P14-201ENST00000412545 360 ntBASIC5.53□□□□□ -1.52
CCDC85AQ96PX6 AL096701.2-201ENST00000416920 238 ntBASIC5.53□□□□□ -1.52
CCDC85AQ96PX6 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CCDC85AQ96PX6 RPEP5-201ENST00000441137 268 ntBASIC5.53□□□□□ -1.52
CCDC85AQ96PX6 AC073587.1-201ENST00000447093 876 ntBASIC5.53□□□□□ -1.52
CCDC85AQ96PX6 NDUFB1P2-201ENST00000449477 176 ntBASIC5.53□□□□□ -1.52
CCDC85AQ96PX6 U8.21-201ENST00000459536 136 ntBASIC5.53□□□□□ -1.52
CCDC85AQ96PX6 RPL7AP28-201ENST00000464513 571 ntBASIC5.53□□□□□ -1.52
CCDC85AQ96PX6 CREM-226ENST00000469949 721 ntTSL 3 BASIC5.53□□□□□ -1.52
CCDC85AQ96PX6 AC110792.1-201ENST00000491826 472 ntBASIC5.53□□□□□ -1.52
CCDC85AQ96PX6 AC091167.1-201ENST00000492017 396 ntBASIC5.53□□□□□ -1.52
CCDC85AQ96PX6 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC5.53□□□□□ -1.52
CCDC85AQ96PX6 RNU5B-3P-201ENST00000516601 115 ntBASIC5.53□□□□□ -1.52
CCDC85AQ96PX6 AC008489.1-201ENST00000524271 483 ntBASIC5.53□□□□□ -1.52
CCDC85AQ96PX6 AC025884.1-201ENST00000556034 378 ntBASIC5.53□□□□□ -1.52
CCDC85AQ96PX6 BNIP3P5-201ENST00000562290 498 ntBASIC5.53□□□□□ -1.52
CCDC85AQ96PX6 MIR3160-1-201ENST00000577972 85 ntBASIC5.53□□□□□ -1.52
CCDC85AQ96PX6 AL158827.2-201ENST00000602494 330 ntBASIC5.53□□□□□ -1.52
CCDC85AQ96PX6 AC107294.1-201ENST00000609524 467 ntBASIC5.53□□□□□ -1.52
CCDC85AQ96PX6 ZYXP1-201ENST00000617638 118 ntBASIC5.53□□□□□ -1.52
CCDC85AQ96PX6 MIR6891-201ENST00000618788 93 ntBASIC5.53□□□□□ -1.52
CCDC85AQ96PX6 AC243829.7-201ENST00000633081 225 ntBASIC5.53□□□□□ -1.52
CCDC85AQ96PX6 AL691447.3-201ENST00000635020 330 ntBASIC5.53□□□□□ -1.52
CCDC85AQ96PX6 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC5.53□□□□□ -1.52
CCDC85AQ96PX6 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CCDC85AQ96PX6 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CCDC85AQ96PX6 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
CCDC85AQ96PX6 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC5.53□□□□□ -1.52
CCDC85AQ96PX6 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CCDC85AQ96PX6 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC5.53□□□□□ -1.52
CCDC85AQ96PX6 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CCDC85AQ96PX6 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CCDC85AQ96PX6 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CCDC85AQ96PX6 RPL9P7-201ENST00000330965 580 ntBASIC5.52□□□□□ -1.53
CCDC85AQ96PX6 RNU1-83P-201ENST00000363426 164 ntBASIC5.52□□□□□ -1.53
CCDC85AQ96PX6 RNU6-595P-201ENST00000363944 107 ntBASIC5.52□□□□□ -1.53
CCDC85AQ96PX6 RNU6-395P-201ENST00000365662 106 ntBASIC5.52□□□□□ -1.53
CCDC85AQ96PX6 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC5.52□□□□□ -1.53
CCDC85AQ96PX6 SDHCP2-201ENST00000398565 501 ntBASIC5.52□□□□□ -1.53
CCDC85AQ96PX6 Y_RNA.592-201ENST00000410274 109 ntBASIC5.52□□□□□ -1.53
CCDC85AQ96PX6 AL451062.2-201ENST00000427515 271 ntBASIC5.52□□□□□ -1.53
CCDC85AQ96PX6 AL513043.1-201ENST00000439124 535 ntBASIC5.52□□□□□ -1.53
CCDC85AQ96PX6 RANP8-201ENST00000444720 713 ntBASIC5.52□□□□□ -1.53
CCDC85AQ96PX6 AC087588.1-201ENST00000462203 316 ntBASIC5.52□□□□□ -1.53
CCDC85AQ96PX6 RPL9P9-202ENST00000466501 579 ntBASIC5.52□□□□□ -1.53
CCDC85AQ96PX6 UQCRHP4-201ENST00000471686 272 ntBASIC5.52□□□□□ -1.53
CCDC85AQ96PX6 PARP4P3-201ENST00000510265 317 ntBASIC5.52□□□□□ -1.53
CCDC85AQ96PX6 RNU6-1315P-201ENST00000517187 99 ntBASIC5.52□□□□□ -1.53
CCDC85AQ96PX6 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC5.52□□□□□ -1.53
CCDC85AQ96PX6 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC5.52□□□□□ -1.53
CCDC85AQ96PX6 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC5.52□□□□□ -1.53
CCDC85AQ96PX6 AMZ2P1-203ENST00000565833 850 ntBASIC5.52□□□□□ -1.53
CCDC85AQ96PX6 MIR5696-201ENST00000578474 85 ntBASIC5.52□□□□□ -1.53
CCDC85AQ96PX6 MIR1273C-201ENST00000578669 77 ntBASIC5.52□□□□□ -1.53
CCDC85AQ96PX6 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC5.52□□□□□ -1.53
CCDC85AQ96PX6 AC113403.1-201ENST00000604910 193 ntBASIC5.52□□□□□ -1.53
CCDC85AQ96PX6 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.52□□□□□ -1.53
CCDC85AQ96PX6 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC5.52□□□□□ -1.53
CCDC85AQ96PX6 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CCDC85AQ96PX6 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
CCDC85AQ96PX6 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CCDC85AQ96PX6 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
CCDC85AQ96PX6 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC5.51□□□□□ -1.53
CCDC85AQ96PX6 SNORA70C-201ENST00000384538 135 ntBASIC5.51□□□□□ -1.53
CCDC85AQ96PX6 RNU6-1203P-201ENST00000410703 110 ntBASIC5.51□□□□□ -1.53
CCDC85AQ96PX6 OR4C10P-201ENST00000434991 931 ntBASIC5.51□□□□□ -1.53
CCDC85AQ96PX6 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC5.51□□□□□ -1.53
CCDC85AQ96PX6 AC104332.1-201ENST00000440471 797 ntBASIC5.51□□□□□ -1.53
CCDC85AQ96PX6 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC5.51□□□□□ -1.53
CCDC85AQ96PX6 HMGB3P16-201ENST00000508037 287 ntBASIC5.51□□□□□ -1.53
CCDC85AQ96PX6 HMGN1P11-201ENST00000508668 303 ntBASIC5.51□□□□□ -1.53
CCDC85AQ96PX6 Y_RNA.713-201ENST00000517013 96 ntBASIC5.51□□□□□ -1.53
CCDC85AQ96PX6 AL161713.1-201ENST00000555538 145 ntBASIC5.51□□□□□ -1.53
CCDC85AQ96PX6 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC5.51□□□□□ -1.53
CCDC85AQ96PX6 MIR3653-201ENST00000625572 110 ntBASIC5.51□□□□□ -1.53
CCDC85AQ96PX6 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC5.51□□□□□ -1.53
CCDC85AQ96PX6 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CCDC85AQ96PX6 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CCDC85AQ96PX6 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC5.5□□□□□ -1.53
CCDC85AQ96PX6 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC5.5□□□□□ -1.53
CCDC85AQ96PX6 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CCDC85AQ96PX6 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 97.9 ms