Protein–RNA interactions for Protein: Q96HJ5

MS4A3, Membrane-spanning 4-domains subfamily A member 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A3Q96HJ5 RNU6-267P-201ENST00000516714 103 ntBASIC5.71□□□□□ -1.5
MS4A3Q96HJ5 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC5.71□□□□□ -1.5
MS4A3Q96HJ5 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC5.71□□□□□ -1.5
MS4A3Q96HJ5 AC097467.4-201ENST00000605504 141 ntBASIC5.71□□□□□ -1.5
MS4A3Q96HJ5 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
MS4A3Q96HJ5 MIR7854-201ENST00000620068 65 ntBASIC5.71□□□□□ -1.5
MS4A3Q96HJ5 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
MS4A3Q96HJ5 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC5.71□□□□□ -1.5
MS4A3Q96HJ5 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
MS4A3Q96HJ5 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
MS4A3Q96HJ5 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC5.7□□□□□ -1.5
MS4A3Q96HJ5 STK3-216ENST00000523601 3107 ntTSL 2 BASIC5.7□□□□□ -1.5
MS4A3Q96HJ5 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC5.7□□□□□ -1.5
MS4A3Q96HJ5 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
MS4A3Q96HJ5 SMG1P4-204ENST00000523028 4131 ntBASIC5.7□□□□□ -1.5
MS4A3Q96HJ5 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
MS4A3Q96HJ5 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
MS4A3Q96HJ5 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC5.7□□□□□ -1.5
MS4A3Q96HJ5 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
MS4A3Q96HJ5 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
MS4A3Q96HJ5 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
MS4A3Q96HJ5 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
MS4A3Q96HJ5 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
MS4A3Q96HJ5 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
MS4A3Q96HJ5 SNORA27.1-201ENST00000362604 124 ntBASIC5.7□□□□□ -1.5
MS4A3Q96HJ5 RNU1-46P-201ENST00000384425 164 ntBASIC5.7□□□□□ -1.5
MS4A3Q96HJ5 RN7SKP267-201ENST00000410381 285 ntBASIC5.7□□□□□ -1.5
MS4A3Q96HJ5 AL359092.1-201ENST00000417156 265 ntBASIC5.7□□□□□ -1.5
MS4A3Q96HJ5 AL590399.4-201ENST00000436561 601 ntBASIC5.7□□□□□ -1.5
MS4A3Q96HJ5 SNRPGP3-201ENST00000469405 227 ntBASIC5.7□□□□□ -1.5
MS4A3Q96HJ5 RN7SL413P-201ENST00000482700 297 ntBASIC5.7□□□□□ -1.5
MS4A3Q96HJ5 RN7SL612P-201ENST00000497704 295 ntBASIC5.7□□□□□ -1.5
MS4A3Q96HJ5 RNU2-44P-201ENST00000516795 194 ntBASIC5.7□□□□□ -1.5
MS4A3Q96HJ5 RNU4ATAC17P-201ENST00000517272 120 ntBASIC5.7□□□□□ -1.5
MS4A3Q96HJ5 AC109329.2-201ENST00000519658 482 ntBASIC5.7□□□□□ -1.5
MS4A3Q96HJ5 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC5.7□□□□□ -1.5
MS4A3Q96HJ5 RPL12P48-201ENST00000605620 304 ntBASIC5.7□□□□□ -1.5
MS4A3Q96HJ5 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
MS4A3Q96HJ5 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
MS4A3Q96HJ5 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
MS4A3Q96HJ5 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.5
MS4A3Q96HJ5 CARF-208ENST00000428585 2513 ntTSL 2 BASIC5.7□□□□□ -1.5
MS4A3Q96HJ5 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
MS4A3Q96HJ5 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
MS4A3Q96HJ5 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.5
MS4A3Q96HJ5 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC5.7□□□□□ -1.5
MS4A3Q96HJ5 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
MS4A3Q96HJ5 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
MS4A3Q96HJ5 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
MS4A3Q96HJ5 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
MS4A3Q96HJ5 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC5.69□□□□□ -1.5
MS4A3Q96HJ5 AL356292.1-201ENST00000283110 373 ntBASIC5.69□□□□□ -1.5
MS4A3Q96HJ5 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC5.69□□□□□ -1.5
MS4A3Q96HJ5 RNU6-590P-201ENST00000365039 107 ntBASIC5.69□□□□□ -1.5
MS4A3Q96HJ5 RNU6-652P-201ENST00000365488 107 ntBASIC5.69□□□□□ -1.5
MS4A3Q96HJ5 MIR562-201ENST00000384894 95 ntBASIC5.69□□□□□ -1.5
MS4A3Q96HJ5 RNU6-816P-201ENST00000390914 107 ntBASIC5.69□□□□□ -1.5
MS4A3Q96HJ5 RNU6-1268P-201ENST00000391214 107 ntBASIC5.69□□□□□ -1.5
MS4A3Q96HJ5 RNU6-1239P-201ENST00000391310 107 ntBASIC5.69□□□□□ -1.5
MS4A3Q96HJ5 AC106900.1-201ENST00000418620 456 ntTSL 5 BASIC5.69□□□□□ -1.5
MS4A3Q96HJ5 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC5.69□□□□□ -1.5
MS4A3Q96HJ5 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC5.69□□□□□ -1.5
MS4A3Q96HJ5 SCARNA5-201ENST00000516201 276 ntBASIC5.69□□□□□ -1.5
MS4A3Q96HJ5 SCARNA15-202ENST00000516881 127 ntBASIC5.69□□□□□ -1.5
MS4A3Q96HJ5 IGLV3-6-201ENST00000523937 250 ntBASIC5.69□□□□□ -1.5
MS4A3Q96HJ5 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC5.69□□□□□ -1.5
MS4A3Q96HJ5 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC5.69□□□□□ -1.5
MS4A3Q96HJ5 AL096869.1-201ENST00000557622 559 ntTSL 4 BASIC5.69□□□□□ -1.5
MS4A3Q96HJ5 RN7SL208P-201ENST00000577964 296 ntBASIC5.69□□□□□ -1.5
MS4A3Q96HJ5 FTX_3.1-201ENST00000610451 147 ntBASIC5.69□□□□□ -1.5
MS4A3Q96HJ5 IGKV2OR2-10-201ENST00000613976 311 ntBASIC5.69□□□□□ -1.5
MS4A3Q96HJ5 AP001264.1-201ENST00000620602 703 ntBASIC5.69□□□□□ -1.5
MS4A3Q96HJ5 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
MS4A3Q96HJ5 AC020656.2-201ENST00000613291 5309 ntBASIC5.69□□□□□ -1.5
MS4A3Q96HJ5 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC5.69□□□□□ -1.5
MS4A3Q96HJ5 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
MS4A3Q96HJ5 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC5.69□□□□□ -1.5
MS4A3Q96HJ5 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
MS4A3Q96HJ5 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC5.69□□□□□ -1.5
MS4A3Q96HJ5 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
MS4A3Q96HJ5 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
MS4A3Q96HJ5 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
MS4A3Q96HJ5 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
MS4A3Q96HJ5 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
MS4A3Q96HJ5 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
MS4A3Q96HJ5 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC5.68□□□□□ -1.5
MS4A3Q96HJ5 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
MS4A3Q96HJ5 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
MS4A3Q96HJ5 RN7SKP184-201ENST00000362348 333 ntBASIC5.68□□□□□ -1.5
MS4A3Q96HJ5 RNU1-72P-201ENST00000362976 153 ntBASIC5.68□□□□□ -1.5
MS4A3Q96HJ5 Y_RNA.203-201ENST00000364106 102 ntBASIC5.68□□□□□ -1.5
MS4A3Q96HJ5 SNORD115-35-201ENST00000365122 82 ntBASIC5.68□□□□□ -1.5
MS4A3Q96HJ5 SNORA64.3-201ENST00000365647 134 ntBASIC5.68□□□□□ -1.5
MS4A3Q96HJ5 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
MS4A3Q96HJ5 RNY1P6-201ENST00000384193 109 ntBASIC5.68□□□□□ -1.5
MS4A3Q96HJ5 Y_RNA.565-201ENST00000384719 101 ntBASIC5.68□□□□□ -1.5
MS4A3Q96HJ5 FAM183DP-201ENST00000421987 399 ntBASIC5.68□□□□□ -1.5
MS4A3Q96HJ5 AL591419.1-201ENST00000427423 339 ntBASIC5.68□□□□□ -1.5
MS4A3Q96HJ5 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
MS4A3Q96HJ5 AL353705.1-201ENST00000433468 480 ntBASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms