Protein–RNA interactions for Protein: Q8NI28

LINC01006, Putative uncharacterized protein encoded by LINC01006, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006Q8NI28 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
LINC01006Q8NI28 AC068050.1-201ENST00000394891 380 ntBASIC2.31□□□□□ -2.04
LINC01006Q8NI28 RNU4-55P-201ENST00000410731 137 ntBASIC2.31□□□□□ -2.04
LINC01006Q8NI28 AC018630.2-202ENST00000422992 927 ntBASIC2.31□□□□□ -2.04
LINC01006Q8NI28 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC2.31□□□□□ -2.04
LINC01006Q8NI28 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC2.31□□□□□ -2.04
LINC01006Q8NI28 SNRPEP4-201ENST00000435815 279 ntBASIC2.31□□□□□ -2.04
LINC01006Q8NI28 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC2.31□□□□□ -2.04
LINC01006Q8NI28 RPS12P18-201ENST00000442381 270 ntBASIC2.31□□□□□ -2.04
LINC01006Q8NI28 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC2.31□□□□□ -2.04
LINC01006Q8NI28 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC2.31□□□□□ -2.04
LINC01006Q8NI28 AC132479.1-201ENST00000449160 144 ntBASIC2.31□□□□□ -2.04
LINC01006Q8NI28 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.31□□□□□ -2.04
LINC01006Q8NI28 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC2.31□□□□□ -2.04
LINC01006Q8NI28 AC010401.1-201ENST00000463867 348 ntBASIC2.31□□□□□ -2.04
LINC01006Q8NI28 RPL31P60-201ENST00000478450 367 ntBASIC2.31□□□□□ -2.04
LINC01006Q8NI28 AC012181.1-201ENST00000479895 423 ntBASIC2.31□□□□□ -2.04
LINC01006Q8NI28 RN7SL20P-201ENST00000488827 297 ntBASIC2.31□□□□□ -2.04
LINC01006Q8NI28 SCARNA20.6-201ENST00000517251 106 ntBASIC2.31□□□□□ -2.04
LINC01006Q8NI28 AC100870.1-201ENST00000522035 505 ntBASIC2.31□□□□□ -2.04
LINC01006Q8NI28 MTCYBP20-201ENST00000524239 1129 ntBASIC2.31□□□□□ -2.04
LINC01006Q8NI28 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
LINC01006Q8NI28 SUB1P2-201ENST00000556401 297 ntBASIC2.31□□□□□ -2.04
LINC01006Q8NI28 AC055876.1-202ENST00000567053 138 ntBASIC2.31□□□□□ -2.04
LINC01006Q8NI28 HMGB1P6-201ENST00000569046 646 ntBASIC2.31□□□□□ -2.04
LINC01006Q8NI28 AC010546.1-201ENST00000569391 485 ntBASIC2.31□□□□□ -2.04
LINC01006Q8NI28 MIR3921-201ENST00000577308 85 ntBASIC2.31□□□□□ -2.04
LINC01006Q8NI28 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC2.31□□□□□ -2.04
LINC01006Q8NI28 Z84480.1-201ENST00000605131 311 ntBASIC2.31□□□□□ -2.04
LINC01006Q8NI28 AC007619.2-201ENST00000605743 379 ntBASIC2.31□□□□□ -2.04
LINC01006Q8NI28 AC090132.2-201ENST00000615881 347 ntBASIC2.31□□□□□ -2.04
LINC01006Q8NI28 AL158209.2-201ENST00000619266 216 ntBASIC2.31□□□□□ -2.04
LINC01006Q8NI28 AC007318.2-201ENST00000620999 243 ntBASIC2.31□□□□□ -2.04
LINC01006Q8NI28 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC2.31□□□□□ -2.04
LINC01006Q8NI28 AL157786.1-207ENST00000627771 695 ntBASIC2.31□□□□□ -2.04
LINC01006Q8NI28 MIR6863-201ENST00000636112 90 ntBASIC2.31□□□□□ -2.04
LINC01006Q8NI28 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC2.31□□□□□ -2.04
LINC01006Q8NI28 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC2.31□□□□□ -2.04
LINC01006Q8NI28 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC2.3□□□□□ -2.04
LINC01006Q8NI28 FAM35BP-202ENST00000497389 3337 ntBASIC2.3□□□□□ -2.04
LINC01006Q8NI28 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC2.3□□□□□ -2.04
LINC01006Q8NI28 AC007256.1-201ENST00000392253 2765 ntBASIC2.3□□□□□ -2.04
LINC01006Q8NI28 AC096644.4-201ENST00000563417 2912 ntBASIC2.3□□□□□ -2.04
LINC01006Q8NI28 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
LINC01006Q8NI28 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.3□□□□□ -2.04
LINC01006Q8NI28 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
LINC01006Q8NI28 HSPE1P11-201ENST00000339579 310 ntBASIC2.3□□□□□ -2.04
LINC01006Q8NI28 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.3□□□□□ -2.04
LINC01006Q8NI28 AC062016.1-201ENST00000355719 319 ntBASIC2.3□□□□□ -2.04
LINC01006Q8NI28 SNORA9.2-201ENST00000365361 133 ntBASIC2.3□□□□□ -2.04
LINC01006Q8NI28 Y_RNA.381-201ENST00000365666 102 ntBASIC2.3□□□□□ -2.04
LINC01006Q8NI28 SMIM11P1-201ENST00000369586 178 ntBASIC2.3□□□□□ -2.04
LINC01006Q8NI28 AP002088.1-201ENST00000382740 395 ntBASIC2.3□□□□□ -2.04
LINC01006Q8NI28 RNU6-456P-201ENST00000384493 107 ntBASIC2.3□□□□□ -2.04
LINC01006Q8NI28 MIR1-2-201ENST00000384961 85 ntBASIC2.3□□□□□ -2.04
LINC01006Q8NI28 MIR591-201ENST00000385290 95 ntBASIC2.3□□□□□ -2.04
LINC01006Q8NI28 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
LINC01006Q8NI28 RNU6-780P-201ENST00000391030 104 ntBASIC2.3□□□□□ -2.04
LINC01006Q8NI28 NDUFS5P1-201ENST00000405668 289 ntBASIC2.3□□□□□ -2.04
LINC01006Q8NI28 MIR1290-201ENST00000408735 78 ntBASIC2.3□□□□□ -2.04
LINC01006Q8NI28 RN7SKP140-201ENST00000411196 284 ntBASIC2.3□□□□□ -2.04
LINC01006Q8NI28 RPL32P35-201ENST00000415214 394 ntBASIC2.3□□□□□ -2.04
LINC01006Q8NI28 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.3□□□□□ -2.04
LINC01006Q8NI28 SDCBPP3-201ENST00000419629 891 ntBASIC2.3□□□□□ -2.04
LINC01006Q8NI28 NUP35P1-201ENST00000422734 947 ntBASIC2.3□□□□□ -2.04
LINC01006Q8NI28 MTCO2P19-201ENST00000427513 598 ntBASIC2.3□□□□□ -2.04
LINC01006Q8NI28 AC137499.1-201ENST00000427602 88 ntBASIC2.3□□□□□ -2.04
LINC01006Q8NI28 OR2AS1P-201ENST00000427827 319 ntBASIC2.3□□□□□ -2.04
LINC01006Q8NI28 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC2.3□□□□□ -2.04
LINC01006Q8NI28 USP12PX-201ENST00000432383 1057 ntBASIC2.3□□□□□ -2.04
LINC01006Q8NI28 AC087499.2-201ENST00000432861 149 ntBASIC2.3□□□□□ -2.04
LINC01006Q8NI28 BX679664.1-201ENST00000434429 253 ntBASIC2.3□□□□□ -2.04
LINC01006Q8NI28 MTND1P4-201ENST00000435196 415 ntBASIC2.3□□□□□ -2.04
LINC01006Q8NI28 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC2.3□□□□□ -2.04
LINC01006Q8NI28 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC2.3□□□□□ -2.04
LINC01006Q8NI28 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC2.3□□□□□ -2.04
LINC01006Q8NI28 MTND1P1-201ENST00000445453 368 ntBASIC2.3□□□□□ -2.04
LINC01006Q8NI28 AC020550.1-201ENST00000447385 163 ntBASIC2.3□□□□□ -2.04
LINC01006Q8NI28 AC006539.3-201ENST00000454258 129 ntBASIC2.3□□□□□ -2.04
LINC01006Q8NI28 SRRM1P2-201ENST00000464531 1192 ntBASIC2.3□□□□□ -2.04
LINC01006Q8NI28 RN7SL330P-201ENST00000469709 307 ntBASIC2.3□□□□□ -2.04
LINC01006Q8NI28 RN7SL432P-201ENST00000484057 298 ntBASIC2.3□□□□□ -2.04
LINC01006Q8NI28 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC2.3□□□□□ -2.04
LINC01006Q8NI28 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
LINC01006Q8NI28 AL359273.1-201ENST00000510918 627 ntBASIC2.3□□□□□ -2.04
LINC01006Q8NI28 TTC39CP1-201ENST00000512513 755 ntBASIC2.3□□□□□ -2.04
LINC01006Q8NI28 AC108727.1-201ENST00000513802 393 ntTSL 2 BASIC2.3□□□□□ -2.04
LINC01006Q8NI28 RNA5SP217-201ENST00000515959 91 ntBASIC2.3□□□□□ -2.04
LINC01006Q8NI28 RNU6-1256P-201ENST00000516539 103 ntBASIC2.3□□□□□ -2.04
LINC01006Q8NI28 RNU7-51P-201ENST00000516560 62 ntBASIC2.3□□□□□ -2.04
LINC01006Q8NI28 NRON-201ENST00000517270 370 ntBASIC2.3□□□□□ -2.04
LINC01006Q8NI28 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
LINC01006Q8NI28 AC022690.1-201ENST00000526681 550 ntBASIC2.3□□□□□ -2.04
LINC01006Q8NI28 AC011979.2-201ENST00000527568 352 ntBASIC2.3□□□□□ -2.04
LINC01006Q8NI28 AC093012.1-202ENST00000549403 582 ntBASIC2.3□□□□□ -2.04
LINC01006Q8NI28 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.3□□□□□ -2.04
LINC01006Q8NI28 AL355836.1-201ENST00000555951 870 ntBASIC2.3□□□□□ -2.04
LINC01006Q8NI28 CYCSP39-201ENST00000565821 309 ntBASIC2.3□□□□□ -2.04
LINC01006Q8NI28 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC2.3□□□□□ -2.04
LINC01006Q8NI28 AL035413.2-201ENST00000604801 525 ntBASIC2.3□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 120.6 ms