Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 AC007529.1-201ENST00000418574 2178 ntBASIC4.66□□□□□ -1.66
RSPO4Q2I0M5 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC4.66□□□□□ -1.66
RSPO4Q2I0M5 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
RSPO4Q2I0M5 RNU6-1301P-201ENST00000362724 104 ntBASIC4.66□□□□□ -1.66
RSPO4Q2I0M5 RNU6-653P-201ENST00000363074 106 ntBASIC4.66□□□□□ -1.66
RSPO4Q2I0M5 RNU6-147P-201ENST00000383983 107 ntBASIC4.66□□□□□ -1.66
RSPO4Q2I0M5 Y_RNA.412-201ENST00000384001 104 ntBASIC4.66□□□□□ -1.66
RSPO4Q2I0M5 RNU6-21P-201ENST00000384710 107 ntBASIC4.66□□□□□ -1.66
RSPO4Q2I0M5 MIR200C-201ENST00000384980 68 ntBASIC4.66□□□□□ -1.66
RSPO4Q2I0M5 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
RSPO4Q2I0M5 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
RSPO4Q2I0M5 SNORA46.1-201ENST00000391069 153 ntBASIC4.66□□□□□ -1.66
RSPO4Q2I0M5 RNU4-65P-201ENST00000410473 140 ntBASIC4.66□□□□□ -1.66
RSPO4Q2I0M5 CYCSP33-201ENST00000414485 327 ntBASIC4.66□□□□□ -1.66
RSPO4Q2I0M5 TBCAP2-201ENST00000416175 326 ntBASIC4.66□□□□□ -1.66
RSPO4Q2I0M5 EBAG9P1-201ENST00000418955 543 ntBASIC4.66□□□□□ -1.66
RSPO4Q2I0M5 EEF1B2P7-201ENST00000451177 676 ntBASIC4.66□□□□□ -1.66
RSPO4Q2I0M5 AC083899.1-201ENST00000454465 3819 ntBASIC4.66□□□□□ -1.66
RSPO4Q2I0M5 RPL21P126-201ENST00000470049 478 ntBASIC4.66□□□□□ -1.66
RSPO4Q2I0M5 UQCRHP4-201ENST00000471686 272 ntBASIC4.66□□□□□ -1.66
RSPO4Q2I0M5 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC4.66□□□□□ -1.66
RSPO4Q2I0M5 RNU6-659P-201ENST00000516454 104 ntBASIC4.66□□□□□ -1.66
RSPO4Q2I0M5 RNU6-352P-201ENST00000516908 107 ntBASIC4.66□□□□□ -1.66
RSPO4Q2I0M5 Y_RNA.706-201ENST00000516933 99 ntBASIC4.66□□□□□ -1.66
RSPO4Q2I0M5 RN7SKP60-201ENST00000516985 239 ntBASIC4.66□□□□□ -1.66
RSPO4Q2I0M5 AC090281.1-201ENST00000523019 276 ntBASIC4.66□□□□□ -1.66
RSPO4Q2I0M5 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC4.66□□□□□ -1.66
RSPO4Q2I0M5 AC115990.1-201ENST00000526957 301 ntBASIC4.66□□□□□ -1.66
RSPO4Q2I0M5 AC067852.3-201ENST00000589177 561 ntBASIC4.66□□□□□ -1.66
RSPO4Q2I0M5 TUG1_2.1-201ENST00000614234 87 ntBASIC4.66□□□□□ -1.66
RSPO4Q2I0M5 MIR492-201ENST00000638676 116 ntBASIC4.66□□□□□ -1.66
RSPO4Q2I0M5 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
RSPO4Q2I0M5 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC4.66□□□□□ -1.66
RSPO4Q2I0M5 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC4.66□□□□□ -1.66
RSPO4Q2I0M5 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
RSPO4Q2I0M5 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
RSPO4Q2I0M5 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
RSPO4Q2I0M5 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC4.66□□□□□ -1.66
RSPO4Q2I0M5 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
RSPO4Q2I0M5 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC4.66□□□□□ -1.66
RSPO4Q2I0M5 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
RSPO4Q2I0M5 SALL4P2-201ENST00000423288 2910 ntBASIC4.66□□□□□ -1.66
RSPO4Q2I0M5 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
RSPO4Q2I0M5 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC4.65□□□□□ -1.66
RSPO4Q2I0M5 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
RSPO4Q2I0M5 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC4.65□□□□□ -1.66
RSPO4Q2I0M5 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
RSPO4Q2I0M5 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.65□□□□□ -1.66
RSPO4Q2I0M5 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.66
RSPO4Q2I0M5 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.66
RSPO4Q2I0M5 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
RSPO4Q2I0M5 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
RSPO4Q2I0M5 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC4.65□□□□□ -1.66
RSPO4Q2I0M5 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC4.65□□□□□ -1.66
RSPO4Q2I0M5 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
RSPO4Q2I0M5 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.65□□□□□ -1.66
RSPO4Q2I0M5 MIR410-201ENST00000362222 80 ntBASIC4.65□□□□□ -1.67
RSPO4Q2I0M5 SNORA63.1-201ENST00000362493 131 ntBASIC4.65□□□□□ -1.67
RSPO4Q2I0M5 U8.7-201ENST00000364940 136 ntBASIC4.65□□□□□ -1.67
RSPO4Q2I0M5 SNORA20-201ENST00000384662 132 ntBASIC4.65□□□□□ -1.67
RSPO4Q2I0M5 RNU6-607P-201ENST00000411283 108 ntBASIC4.65□□□□□ -1.67
RSPO4Q2I0M5 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC4.65□□□□□ -1.67
RSPO4Q2I0M5 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC4.65□□□□□ -1.67
RSPO4Q2I0M5 AL360271.2-201ENST00000447710 161 ntBASIC4.65□□□□□ -1.67
RSPO4Q2I0M5 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC4.65□□□□□ -1.67
RSPO4Q2I0M5 AC234775.1-201ENST00000454247 670 ntBASIC4.65□□□□□ -1.67
RSPO4Q2I0M5 RPS27AP9-201ENST00000477681 438 ntBASIC4.65□□□□□ -1.67
RSPO4Q2I0M5 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC4.65□□□□□ -1.67
RSPO4Q2I0M5 AC073073.1-201ENST00000493920 463 ntBASIC4.65□□□□□ -1.67
RSPO4Q2I0M5 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC4.65□□□□□ -1.67
RSPO4Q2I0M5 RNU4ATAC18P-201ENST00000516179 126 ntBASIC4.65□□□□□ -1.67
RSPO4Q2I0M5 RNU6-168P-201ENST00000516189 101 ntBASIC4.65□□□□□ -1.67
RSPO4Q2I0M5 Y_RNA.694-201ENST00000516677 117 ntBASIC4.65□□□□□ -1.67
RSPO4Q2I0M5 AP003730.1-201ENST00000524605 285 ntBASIC4.65□□□□□ -1.67
RSPO4Q2I0M5 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC4.65□□□□□ -1.67
RSPO4Q2I0M5 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC4.65□□□□□ -1.67
RSPO4Q2I0M5 AL358913.1-201ENST00000554342 121 ntBASIC4.65□□□□□ -1.67
RSPO4Q2I0M5 RPL21P9-201ENST00000556149 474 ntBASIC4.65□□□□□ -1.67
RSPO4Q2I0M5 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC4.65□□□□□ -1.67
RSPO4Q2I0M5 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC4.65□□□□□ -1.67
RSPO4Q2I0M5 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
RSPO4Q2I0M5 AC069200.1-201ENST00000609511 323 ntBASIC4.65□□□□□ -1.67
RSPO4Q2I0M5 AC243654.2-201ENST00000612843 443 ntBASIC4.65□□□□□ -1.67
RSPO4Q2I0M5 DLD-214ENST00000639772 421 ntTSL 5 BASIC4.65□□□□□ -1.67
RSPO4Q2I0M5 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC4.65□□□□□ -1.67
RSPO4Q2I0M5 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC4.65□□□□□ -1.67
RSPO4Q2I0M5 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC4.65□□□□□ -1.67
RSPO4Q2I0M5 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC4.65□□□□□ -1.67
RSPO4Q2I0M5 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
RSPO4Q2I0M5 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC4.65□□□□□ -1.67
RSPO4Q2I0M5 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
RSPO4Q2I0M5 AL121839.2-201ENST00000565058 6943 ntBASIC4.65□□□□□ -1.67
RSPO4Q2I0M5 MTND5P32-201ENST00000560711 1802 ntBASIC4.65□□□□□ -1.67
RSPO4Q2I0M5 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
RSPO4Q2I0M5 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC4.64□□□□□ -1.67
RSPO4Q2I0M5 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC4.64□□□□□ -1.67
RSPO4Q2I0M5 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC4.64□□□□□ -1.67
RSPO4Q2I0M5 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
RSPO4Q2I0M5 GVINP1-202ENST00000531871 7271 ntBASIC4.64□□□□□ -1.67
RSPO4Q2I0M5 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms