Protein–RNA interactions for Protein: Q15768

EFNB3, Ephrin-B3, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB3Q15768 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.11□□□□□ -1.91
EFNB3Q15768 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.11□□□□□ -1.91
EFNB3Q15768 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
EFNB3Q15768 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
EFNB3Q15768 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
EFNB3Q15768 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.1□□□□□ -1.91
EFNB3Q15768 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC3.1□□□□□ -1.91
EFNB3Q15768 UBE2L2-201ENST00000254302 429 ntBASIC3.1□□□□□ -1.91
EFNB3Q15768 SNORA63.1-201ENST00000362493 131 ntBASIC3.1□□□□□ -1.91
EFNB3Q15768 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.1□□□□□ -1.91
EFNB3Q15768 RNU6-876P-201ENST00000391295 104 ntBASIC3.1□□□□□ -1.91
EFNB3Q15768 AC092809.3-201ENST00000415453 231 ntBASIC3.1□□□□□ -1.91
EFNB3Q15768 BX842559.1-201ENST00000419615 532 ntBASIC3.1□□□□□ -1.91
EFNB3Q15768 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC3.1□□□□□ -1.91
EFNB3Q15768 SRIP2-201ENST00000428470 166 ntBASIC3.1□□□□□ -1.91
EFNB3Q15768 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.1□□□□□ -1.91
EFNB3Q15768 TRAPPC2P3-201ENST00000443200 321 ntBASIC3.1□□□□□ -1.91
EFNB3Q15768 AC104058.1-201ENST00000448028 297 ntBASIC3.1□□□□□ -1.91
EFNB3Q15768 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC3.1□□□□□ -1.91
EFNB3Q15768 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
EFNB3Q15768 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.1□□□□□ -1.91
EFNB3Q15768 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC3.1□□□□□ -1.91
EFNB3Q15768 RN7SKP13-201ENST00000515933 244 ntBASIC3.1□□□□□ -1.91
EFNB3Q15768 AL137161.1-201ENST00000532231 390 ntBASIC3.1□□□□□ -1.91
EFNB3Q15768 AC008011.1-201ENST00000545989 227 ntBASIC3.1□□□□□ -1.91
EFNB3Q15768 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC3.1□□□□□ -1.91
EFNB3Q15768 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.1□□□□□ -1.91
EFNB3Q15768 MIR4424-201ENST00000585257 86 ntBASIC3.1□□□□□ -1.91
EFNB3Q15768 AC010525.2-201ENST00000590920 195 ntBASIC3.1□□□□□ -1.91
EFNB3Q15768 AC098826.3-201ENST00000603823 466 ntBASIC3.1□□□□□ -1.91
EFNB3Q15768 AL035413.2-201ENST00000604801 525 ntBASIC3.1□□□□□ -1.91
EFNB3Q15768 AL110115.1-201ENST00000614396 364 ntBASIC3.1□□□□□ -1.91
EFNB3Q15768 AC006504.8-201ENST00000621046 635 ntBASIC3.1□□□□□ -1.91
EFNB3Q15768 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC3.1□□□□□ -1.91
EFNB3Q15768 AC009033.1-201ENST00000624279 431 ntBASIC3.1□□□□□ -1.91
EFNB3Q15768 MTND1P37-201ENST00000636562 264 ntBASIC3.1□□□□□ -1.91
EFNB3Q15768 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.1□□□□□ -1.91
EFNB3Q15768 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
EFNB3Q15768 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
EFNB3Q15768 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
EFNB3Q15768 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.1□□□□□ -1.91
EFNB3Q15768 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.09□□□□□ -1.91
EFNB3Q15768 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.09□□□□□ -1.91
EFNB3Q15768 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC3.09□□□□□ -1.91
EFNB3Q15768 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.09□□□□□ -1.91
EFNB3Q15768 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
EFNB3Q15768 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.09□□□□□ -1.91
EFNB3Q15768 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.09□□□□□ -1.91
EFNB3Q15768 MIR514A2-201ENST00000385131 88 ntBASIC3.09□□□□□ -1.91
EFNB3Q15768 MIR514A3-201ENST00000385132 88 ntBASIC3.09□□□□□ -1.91
EFNB3Q15768 MT-TL1-201ENST00000386347 75 ntBASIC3.09□□□□□ -1.91
EFNB3Q15768 RNU6-1197P-201ENST00000391183 107 ntBASIC3.09□□□□□ -1.91
EFNB3Q15768 CD3D-202ENST00000392884 476 ntTSL 2 BASIC3.09□□□□□ -1.91
EFNB3Q15768 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
EFNB3Q15768 CISD1P1-201ENST00000393907 327 ntBASIC3.09□□□□□ -1.91
EFNB3Q15768 UBE2V1P2-201ENST00000397758 440 ntBASIC3.09□□□□□ -1.91
EFNB3Q15768 AL139397.2-201ENST00000404529 772 ntBASIC3.09□□□□□ -1.91
EFNB3Q15768 U3.42-201ENST00000408746 214 ntBASIC3.09□□□□□ -1.91
EFNB3Q15768 RNA5SP111-201ENST00000411386 101 ntBASIC3.09□□□□□ -1.91
EFNB3Q15768 AC138393.2-201ENST00000414742 246 ntBASIC3.09□□□□□ -1.91
EFNB3Q15768 BTF3L4P3-201ENST00000418879 476 ntBASIC3.09□□□□□ -1.91
EFNB3Q15768 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC3.09□□□□□ -1.91
EFNB3Q15768 NDUFB4P6-201ENST00000436819 366 ntBASIC3.09□□□□□ -1.91
EFNB3Q15768 RPL30P5-201ENST00000494923 336 ntBASIC3.09□□□□□ -1.91
EFNB3Q15768 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.09□□□□□ -1.91
EFNB3Q15768 AC018710.1-201ENST00000506509 158 ntBASIC3.09□□□□□ -1.91
EFNB3Q15768 RNU6-143P-201ENST00000516942 93 ntBASIC3.09□□□□□ -1.91
EFNB3Q15768 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC3.09□□□□□ -1.91
EFNB3Q15768 MTND4P7-201ENST00000523876 130 ntBASIC3.09□□□□□ -1.91
EFNB3Q15768 MDM2-233ENST00000545204 398 ntTSL 5 BASIC3.09□□□□□ -1.91
EFNB3Q15768 BNIP3P6-201ENST00000549284 499 ntBASIC3.09□□□□□ -1.91
EFNB3Q15768 BNIP3P9-201ENST00000603714 553 ntBASIC3.09□□□□□ -1.91
EFNB3Q15768 AL161798.1-201ENST00000604630 131 ntBASIC3.09□□□□□ -1.91
EFNB3Q15768 BNIP3P10-201ENST00000605360 577 ntBASIC3.09□□□□□ -1.91
EFNB3Q15768 BRDTP1-201ENST00000605735 677 ntBASIC3.09□□□□□ -1.91
EFNB3Q15768 AL390240.1-201ENST00000612950 384 ntBASIC3.09□□□□□ -1.91
EFNB3Q15768 uc_338.34-201ENST00000617467 174 ntBASIC3.09□□□□□ -1.91
EFNB3Q15768 AC012314.7-201ENST00000619693 93 ntBASIC3.09□□□□□ -1.91
EFNB3Q15768 AP003355.3-201ENST00000623465 114 ntBASIC3.09□□□□□ -1.91
EFNB3Q15768 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC3.09□□□□□ -1.91
EFNB3Q15768 RPS4XP5-202ENST00000449995 1334 ntBASIC3.09□□□□□ -1.91
EFNB3Q15768 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.09□□□□□ -1.92
EFNB3Q15768 AC007785.2-201ENST00000598627 1916 ntBASIC3.09□□□□□ -1.92
EFNB3Q15768 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.09□□□□□ -1.92
EFNB3Q15768 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.09□□□□□ -1.92
EFNB3Q15768 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
EFNB3Q15768 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
EFNB3Q15768 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
EFNB3Q15768 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.08□□□□□ -1.92
EFNB3Q15768 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
EFNB3Q15768 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.08□□□□□ -1.92
EFNB3Q15768 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
EFNB3Q15768 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.08□□□□□ -1.92
EFNB3Q15768 Y_RNA.231-201ENST00000364358 102 ntBASIC3.08□□□□□ -1.92
EFNB3Q15768 Y_RNA.303-201ENST00000364998 94 ntBASIC3.08□□□□□ -1.92
EFNB3Q15768 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
EFNB3Q15768 RNU6-116P-201ENST00000384042 109 ntBASIC3.08□□□□□ -1.92
EFNB3Q15768 Y_RNA.534-201ENST00000384599 112 ntBASIC3.08□□□□□ -1.92
EFNB3Q15768 MIR183-201ENST00000384958 110 ntBASIC3.08□□□□□ -1.92
EFNB3Q15768 AL592114.1-201ENST00000403842 483 ntBASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 12.1 ms