Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
CSNK1A1P48729 LARP1BP3-201ENST00000437229 869 ntBASIC2.12□□□□□ -2.07
CSNK1A1P48729 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC2.12□□□□□ -2.07
CSNK1A1P48729 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
CSNK1A1P48729 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC2.12□□□□□ -2.07
CSNK1A1P48729 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.12□□□□□ -2.07
CSNK1A1P48729 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
CSNK1A1P48729 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC2.12□□□□□ -2.07
CSNK1A1P48729 AC105252.1-201ENST00000503089 286 ntBASIC2.12□□□□□ -2.07
CSNK1A1P48729 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC2.12□□□□□ -2.07
CSNK1A1P48729 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC2.12□□□□□ -2.07
CSNK1A1P48729 AC234781.5-201ENST00000508429 271 ntBASIC2.12□□□□□ -2.07
CSNK1A1P48729 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC2.12□□□□□ -2.07
CSNK1A1P48729 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC2.12□□□□□ -2.07
CSNK1A1P48729 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.12□□□□□ -2.07
CSNK1A1P48729 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC2.12□□□□□ -2.07
CSNK1A1P48729 IGLV3-17-201ENST00000519099 244 ntBASIC2.12□□□□□ -2.07
CSNK1A1P48729 AC007115.1-201ENST00000546853 234 ntBASIC2.12□□□□□ -2.07
CSNK1A1P48729 AC121758.2-201ENST00000553271 193 ntBASIC2.12□□□□□ -2.07
CSNK1A1P48729 AC009097.3-201ENST00000563557 1018 ntBASIC2.12□□□□□ -2.07
CSNK1A1P48729 AC002545.1-201ENST00000592511 181 ntBASIC2.12□□□□□ -2.07
CSNK1A1P48729 AC006023.1-201ENST00000603944 259 ntBASIC2.12□□□□□ -2.07
CSNK1A1P48729 MTND4LP5-201ENST00000605152 292 ntBASIC2.12□□□□□ -2.07
CSNK1A1P48729 AC067747.1-201ENST00000608026 250 ntBASIC2.12□□□□□ -2.07
CSNK1A1P48729 AC007038.2-201ENST00000608095 740 ntBASIC2.12□□□□□ -2.07
CSNK1A1P48729 AL355472.4-201ENST00000610233 626 ntBASIC2.12□□□□□ -2.07
CSNK1A1P48729 AC068787.1-201ENST00000623908 691 ntBASIC2.12□□□□□ -2.07
CSNK1A1P48729 SCARNA15.3-201ENST00000626315 122 ntBASIC2.12□□□□□ -2.07
CSNK1A1P48729 SCARNA4.1-201ENST00000628597 123 ntBASIC2.12□□□□□ -2.07
CSNK1A1P48729 AC097655.1-201ENST00000635075 318 ntBASIC2.12□□□□□ -2.07
CSNK1A1P48729 CU459211.1-201ENST00000635667 749 ntBASIC2.12□□□□□ -2.07
CSNK1A1P48729 MIR7157-201ENST00000635801 60 ntBASIC2.12□□□□□ -2.07
CSNK1A1P48729 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.12□□□□□ -2.07
CSNK1A1P48729 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC2.12□□□□□ -2.07
CSNK1A1P48729 AC069528.2-201ENST00000624849 1991 ntBASIC2.12□□□□□ -2.07
CSNK1A1P48729 NF1-214ENST00000490416 1329 ntTSL 3 BASIC2.12□□□□□ -2.07
CSNK1A1P48729 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.12□□□□□ -2.07
CSNK1A1P48729 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.11□□□□□ -2.07
CSNK1A1P48729 AC080128.1-201ENST00000474389 1917 ntBASIC2.11□□□□□ -2.07
CSNK1A1P48729 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
CSNK1A1P48729 Y_RNA.302-201ENST00000364997 102 ntBASIC2.11□□□□□ -2.07
CSNK1A1P48729 AC078974.1-201ENST00000411597 223 ntBASIC2.11□□□□□ -2.07
CSNK1A1P48729 NDUFS5P4-201ENST00000412983 318 ntBASIC2.11□□□□□ -2.07
CSNK1A1P48729 RPL21P24-201ENST00000413752 448 ntBASIC2.11□□□□□ -2.07
CSNK1A1P48729 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC2.11□□□□□ -2.07
CSNK1A1P48729 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.11□□□□□ -2.07
CSNK1A1P48729 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC2.11□□□□□ -2.07
CSNK1A1P48729 USP12PX-201ENST00000432383 1057 ntBASIC2.11□□□□□ -2.07
CSNK1A1P48729 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC2.11□□□□□ -2.07
CSNK1A1P48729 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC2.11□□□□□ -2.07
CSNK1A1P48729 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC2.11□□□□□ -2.07
CSNK1A1P48729 UBE2FP3-201ENST00000436366 524 ntBASIC2.11□□□□□ -2.07
CSNK1A1P48729 RPL7P36-201ENST00000444633 681 ntBASIC2.11□□□□□ -2.07
CSNK1A1P48729 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC2.11□□□□□ -2.07
CSNK1A1P48729 AL513328.1-201ENST00000446460 224 ntBASIC2.11□□□□□ -2.07
CSNK1A1P48729 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC2.11□□□□□ -2.07
CSNK1A1P48729 AL139109.1-201ENST00000455491 297 ntBASIC2.11□□□□□ -2.07
CSNK1A1P48729 RPL12P25-201ENST00000455592 494 ntBASIC2.11□□□□□ -2.07
CSNK1A1P48729 LINC00888-204ENST00000487386 421 ntBASIC2.11□□□□□ -2.07
CSNK1A1P48729 AC026436.1-201ENST00000510537 270 ntBASIC2.11□□□□□ -2.07
CSNK1A1P48729 AC114781.4-201ENST00000513707 639 ntBASIC2.11□□□□□ -2.07
CSNK1A1P48729 RNU6-390P-201ENST00000516259 103 ntBASIC2.11□□□□□ -2.07
CSNK1A1P48729 AC068587.4-201ENST00000533893 186 ntBASIC2.11□□□□□ -2.07
CSNK1A1P48729 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
CSNK1A1P48729 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC2.11□□□□□ -2.07
CSNK1A1P48729 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC2.11□□□□□ -2.07
CSNK1A1P48729 AC105137.2-201ENST00000569073 466 ntBASIC2.11□□□□□ -2.07
CSNK1A1P48729 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC2.11□□□□□ -2.07
CSNK1A1P48729 ABBA01006766.1-201ENST00000584728 294 ntBASIC2.11□□□□□ -2.07
CSNK1A1P48729 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC2.11□□□□□ -2.07
CSNK1A1P48729 AC105148.1-201ENST00000604961 409 ntBASIC2.11□□□□□ -2.07
CSNK1A1P48729 AC004908.2-201ENST00000609090 574 ntBASIC2.11□□□□□ -2.07
CSNK1A1P48729 TUSC7.1-201ENST00000610969 165 ntBASIC2.11□□□□□ -2.07
CSNK1A1P48729 AC013562.2-201ENST00000611632 603 ntBASIC2.11□□□□□ -2.07
CSNK1A1P48729 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC2.11□□□□□ -2.07
CSNK1A1P48729 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC2.11□□□□□ -2.07
CSNK1A1P48729 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
CSNK1A1P48729 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
CSNK1A1P48729 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.11□□□□□ -2.07
CSNK1A1P48729 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC2.11□□□□□ -2.07
CSNK1A1P48729 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
CSNK1A1P48729 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
CSNK1A1P48729 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
CSNK1A1P48729 MIR21-201ENST00000362134 72 ntBASIC2.1□□□□□ -2.07
CSNK1A1P48729 RNU6-1214P-201ENST00000363650 109 ntBASIC2.1□□□□□ -2.07
CSNK1A1P48729 RNU1-51P-201ENST00000365345 176 ntBASIC2.1□□□□□ -2.07
CSNK1A1P48729 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC2.1□□□□□ -2.07
CSNK1A1P48729 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.1□□□□□ -2.07
CSNK1A1P48729 AF274854.1-201ENST00000413236 615 ntBASIC2.1□□□□□ -2.07
CSNK1A1P48729 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC2.1□□□□□ -2.07
CSNK1A1P48729 HMGB1P11-201ENST00000413899 637 ntBASIC2.1□□□□□ -2.07
CSNK1A1P48729 USP9YP13-201ENST00000417797 480 ntBASIC2.1□□□□□ -2.07
CSNK1A1P48729 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.1□□□□□ -2.07
CSNK1A1P48729 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC2.1□□□□□ -2.07
CSNK1A1P48729 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC2.1□□□□□ -2.07
CSNK1A1P48729 AC005094.1-201ENST00000440420 368 ntBASIC2.1□□□□□ -2.07
CSNK1A1P48729 AC098831.1-201ENST00000440661 216 ntBASIC2.1□□□□□ -2.07
CSNK1A1P48729 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC2.1□□□□□ -2.07
CSNK1A1P48729 ELOCP30-201ENST00000447108 299 ntBASIC2.1□□□□□ -2.07
CSNK1A1P48729 AC020550.1-201ENST00000447385 163 ntBASIC2.1□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms