Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC2.59□□□□□ -1.99
CDX4O14627 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC2.59□□□□□ -1.99
CDX4O14627 DEFB122-202ENST00000569013 197 ntBASIC2.59□□□□□ -1.99
CDX4O14627 MIR5697-201ENST00000578045 78 ntBASIC2.59□□□□□ -1.99
CDX4O14627 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC2.59□□□□□ -1.99
CDX4O14627 AC005771.1-201ENST00000585581 349 ntBASIC2.59□□□□□ -1.99
CDX4O14627 SEPT7P9-203ENST00000604116 343 ntBASIC2.59□□□□□ -1.99
CDX4O14627 AC009570.1-201ENST00000609599 745 ntBASIC2.59□□□□□ -1.99
CDX4O14627 OR10AB1P-201ENST00000609613 938 ntBASIC2.59□□□□□ -1.99
CDX4O14627 AC103710.1-201ENST00000610003 901 ntBASIC2.59□□□□□ -1.99
CDX4O14627 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC2.59□□□□□ -1.99
CDX4O14627 AC015540.1-201ENST00000615828 501 ntBASIC2.59□□□□□ -1.99
CDX4O14627 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.59□□□□□ -1.99
CDX4O14627 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC2.59□□□□□ -1.99
CDX4O14627 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC2.59□□□□□ -1.99
CDX4O14627 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
CDX4O14627 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC2.59□□□□□ -2
CDX4O14627 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC2.59□□□□□ -2
CDX4O14627 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.59□□□□□ -2
CDX4O14627 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.59□□□□□ -2
CDX4O14627 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC2.58□□□□□ -2
CDX4O14627 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC2.58□□□□□ -2
CDX4O14627 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.58□□□□□ -2
CDX4O14627 EFTUD1P2-201ENST00000514817 1603 ntBASIC2.58□□□□□ -2
CDX4O14627 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
CDX4O14627 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC2.58□□□□□ -2
CDX4O14627 RNU6-809P-201ENST00000384461 107 ntBASIC2.58□□□□□ -2
CDX4O14627 RNU6-297P-201ENST00000384636 107 ntBASIC2.58□□□□□ -2
CDX4O14627 MIR493-201ENST00000385254 89 ntBASIC2.58□□□□□ -2
CDX4O14627 SAR1AP2-201ENST00000392696 594 ntBASIC2.58□□□□□ -2
CDX4O14627 AL109755.1-201ENST00000401791 649 ntBASIC2.58□□□□□ -2
CDX4O14627 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC2.58□□□□□ -2
CDX4O14627 MIR1289-2-201ENST00000408360 111 ntBASIC2.58□□□□□ -2
CDX4O14627 RNU6-648P-201ENST00000410190 107 ntBASIC2.58□□□□□ -2
CDX4O14627 RNA5SP38-201ENST00000410750 119 ntBASIC2.58□□□□□ -2
CDX4O14627 RN7SKP58-201ENST00000411010 305 ntBASIC2.58□□□□□ -2
CDX4O14627 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC2.58□□□□□ -2
CDX4O14627 RPL7P46-201ENST00000425129 740 ntBASIC2.58□□□□□ -2
CDX4O14627 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC2.58□□□□□ -2
CDX4O14627 AL356583.2-201ENST00000426536 280 ntBASIC2.58□□□□□ -2
CDX4O14627 AC008850.1-201ENST00000427546 362 ntBASIC2.58□□□□□ -2
CDX4O14627 SRIP2-201ENST00000428470 166 ntBASIC2.58□□□□□ -2
CDX4O14627 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC2.58□□□□□ -2
CDX4O14627 AL139415.2-201ENST00000431968 163 ntBASIC2.58□□□□□ -2
CDX4O14627 AL591806.2-201ENST00000433122 173 ntBASIC2.58□□□□□ -2
CDX4O14627 RPL22P17-201ENST00000438729 315 ntBASIC2.58□□□□□ -2
CDX4O14627 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC2.58□□□□□ -2
CDX4O14627 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC2.58□□□□□ -2
CDX4O14627 AL022238.1-201ENST00000442557 355 ntBASIC2.58□□□□□ -2
CDX4O14627 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.58□□□□□ -2
CDX4O14627 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC2.58□□□□□ -2
CDX4O14627 TPT1P14-201ENST00000448018 505 ntBASIC2.58□□□□□ -2
CDX4O14627 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.58□□□□□ -2
CDX4O14627 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC2.58□□□□□ -2
CDX4O14627 MTCO1P42-201ENST00000457379 726 ntBASIC2.58□□□□□ -2
CDX4O14627 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC2.58□□□□□ -2
CDX4O14627 AC112204.1-201ENST00000502591 103 ntBASIC2.58□□□□□ -2
CDX4O14627 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC2.58□□□□□ -2
CDX4O14627 RNU6-991P-201ENST00000516168 107 ntBASIC2.58□□□□□ -2
CDX4O14627 RNU6-720P-201ENST00000516363 108 ntBASIC2.58□□□□□ -2
CDX4O14627 SNORA64.4-201ENST00000516632 81 ntBASIC2.58□□□□□ -2
CDX4O14627 RNU6-1003P-201ENST00000517099 105 ntBASIC2.58□□□□□ -2
CDX4O14627 MTND4LP18-201ENST00000526864 291 ntBASIC2.58□□□□□ -2
CDX4O14627 AP003392.2-201ENST00000527269 208 ntBASIC2.58□□□□□ -2
CDX4O14627 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC2.58□□□□□ -2
CDX4O14627 MAL2-203ENST00000534619 578 ntTSL 4 BASIC2.58□□□□□ -2
CDX4O14627 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC2.58□□□□□ -2
CDX4O14627 TRAV37-201ENST00000553906 342 ntBASIC2.58□□□□□ -2
CDX4O14627 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC2.58□□□□□ -2
CDX4O14627 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC2.58□□□□□ -2
CDX4O14627 MIR4528-201ENST00000577763 90 ntBASIC2.58□□□□□ -2
CDX4O14627 UBE2L4-201ENST00000587688 464 ntBASIC2.58□□□□□ -2
CDX4O14627 AL136363.2-201ENST00000604173 851 ntBASIC2.58□□□□□ -2
CDX4O14627 AL359999.1-201ENST00000604513 294 ntBASIC2.58□□□□□ -2
CDX4O14627 AC007621.1-201ENST00000604544 437 ntBASIC2.58□□□□□ -2
CDX4O14627 AC098614.4-201ENST00000607601 462 ntBASIC2.58□□□□□ -2
CDX4O14627 AC006566.1-201ENST00000608943 513 ntBASIC2.58□□□□□ -2
CDX4O14627 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC2.58□□□□□ -2
CDX4O14627 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC2.58□□□□□ -2
CDX4O14627 AC008498.1-201ENST00000613012 531 ntBASIC2.58□□□□□ -2
CDX4O14627 AC013476.2-201ENST00000614456 459 ntBASIC2.58□□□□□ -2
CDX4O14627 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC2.58□□□□□ -2
CDX4O14627 AC104010.1-201ENST00000616889 150 ntBASIC2.58□□□□□ -2
CDX4O14627 AL158801.5-201ENST00000623123 465 ntBASIC2.58□□□□□ -2
CDX4O14627 AL603839.4-201ENST00000624658 1005 ntBASIC2.58□□□□□ -2
CDX4O14627 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC2.58□□□□□ -2
CDX4O14627 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC2.58□□□□□ -2
CDX4O14627 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC2.58□□□□□ -2
CDX4O14627 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.58□□□□□ -2
CDX4O14627 MTND5P27-201ENST00000428871 1720 ntBASIC2.57□□□□□ -2
CDX4O14627 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.57□□□□□ -2
CDX4O14627 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
CDX4O14627 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC2.57□□□□□ -2
CDX4O14627 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC2.57□□□□□ -2
CDX4O14627 SNORD56.3-201ENST00000363507 71 ntBASIC2.57□□□□□ -2
CDX4O14627 SNORA23-201ENST00000365128 182 ntBASIC2.57□□□□□ -2
CDX4O14627 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC2.57□□□□□ -2
CDX4O14627 RNU6-278P-201ENST00000390945 109 ntBASIC2.57□□□□□ -2
CDX4O14627 SNORA40.3-201ENST00000390964 122 ntBASIC2.57□□□□□ -2
CDX4O14627 RN7SKP223-201ENST00000410582 62 ntBASIC2.57□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 89.1 ms