Protein–RNA interactions for Protein: Q9Y3E1

HDGFL3, Hepatoma-derived growth factor-related protein 3, humanhuman

Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3Q9Y3E1 SKA2P1-201ENST00000425592 390 ntBASIC1.69□□□□□ -2.14
HDGFL3Q9Y3E1 UBE2D3P3-201ENST00000426992 425 ntBASIC1.69□□□□□ -2.14
HDGFL3Q9Y3E1 AC093106.2-201ENST00000428212 385 ntBASIC1.69□□□□□ -2.14
HDGFL3Q9Y3E1 RPL30P4-201ENST00000429309 333 ntBASIC1.69□□□□□ -2.14
HDGFL3Q9Y3E1 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC1.69□□□□□ -2.14
HDGFL3Q9Y3E1 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC1.69□□□□□ -2.14
HDGFL3Q9Y3E1 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC1.69□□□□□ -2.14
HDGFL3Q9Y3E1 AC068587.2-201ENST00000478386 781 ntBASIC1.69□□□□□ -2.14
HDGFL3Q9Y3E1 AC092902.1-201ENST00000486999 259 ntBASIC1.69□□□□□ -2.14
HDGFL3Q9Y3E1 AL160314.1-201ENST00000490836 438 ntBASIC1.69□□□□□ -2.14
HDGFL3Q9Y3E1 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC1.69□□□□□ -2.14
HDGFL3Q9Y3E1 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC1.69□□□□□ -2.14
HDGFL3Q9Y3E1 MIR892C-201ENST00000516410 77 ntBASIC1.69□□□□□ -2.14
HDGFL3Q9Y3E1 RNU2-44P-201ENST00000516795 194 ntBASIC1.69□□□□□ -2.14
HDGFL3Q9Y3E1 SNORA31.25-201ENST00000517242 134 ntBASIC1.69□□□□□ -2.14
HDGFL3Q9Y3E1 AC002545.1-201ENST00000592511 181 ntBASIC1.69□□□□□ -2.14
HDGFL3Q9Y3E1 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.69□□□□□ -2.14
HDGFL3Q9Y3E1 AC025165.5-201ENST00000602802 578 ntBASIC1.69□□□□□ -2.14
HDGFL3Q9Y3E1 AL357094.1-201ENST00000603845 844 ntBASIC1.69□□□□□ -2.14
HDGFL3Q9Y3E1 AC069294.1-201ENST00000608397 350 ntBASIC1.69□□□□□ -2.14
HDGFL3Q9Y3E1 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC1.69□□□□□ -2.14
HDGFL3Q9Y3E1 SDR42E1P2-201ENST00000614861 481 ntBASIC1.69□□□□□ -2.14
HDGFL3Q9Y3E1 SDR42E1P4-201ENST00000620894 481 ntBASIC1.69□□□□□ -2.14
HDGFL3Q9Y3E1 AC109454.4-201ENST00000623411 649 ntBASIC1.69□□□□□ -2.14
HDGFL3Q9Y3E1 IL33-202ENST00000417746 2327 ntTSL 2 BASIC1.69□□□□□ -2.14
HDGFL3Q9Y3E1 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.69□□□□□ -2.14
HDGFL3Q9Y3E1 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC1.69□□□□□ -2.14
HDGFL3Q9Y3E1 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.69□□□□□ -2.14
HDGFL3Q9Y3E1 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC1.68□□□□□ -2.14
HDGFL3Q9Y3E1 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC1.68□□□□□ -2.14
HDGFL3Q9Y3E1 RNU6-778P-201ENST00000363269 103 ntBASIC1.68□□□□□ -2.14
HDGFL3Q9Y3E1 U6atac.2-201ENST00000408644 118 ntBASIC1.68□□□□□ -2.14
HDGFL3Q9Y3E1 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
HDGFL3Q9Y3E1 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC1.68□□□□□ -2.14
HDGFL3Q9Y3E1 AL445685.2-201ENST00000422551 342 ntBASIC1.68□□□□□ -2.14
HDGFL3Q9Y3E1 RPS3AP44-201ENST00000425466 790 ntBASIC1.68□□□□□ -2.14
HDGFL3Q9Y3E1 RPL17P35-201ENST00000432217 549 ntBASIC1.68□□□□□ -2.14
HDGFL3Q9Y3E1 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC1.68□□□□□ -2.14
HDGFL3Q9Y3E1 SNRPEP9-201ENST00000436794 238 ntBASIC1.68□□□□□ -2.14
HDGFL3Q9Y3E1 USP9YP22-201ENST00000438971 294 ntBASIC1.68□□□□□ -2.14
HDGFL3Q9Y3E1 ARPC3P5-201ENST00000448802 534 ntBASIC1.68□□□□□ -2.14
HDGFL3Q9Y3E1 AL513124.1-201ENST00000450410 614 ntBASIC1.68□□□□□ -2.14
HDGFL3Q9Y3E1 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC1.68□□□□□ -2.14
HDGFL3Q9Y3E1 MTND1P9-201ENST00000453775 944 ntBASIC1.68□□□□□ -2.14
HDGFL3Q9Y3E1 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC1.68□□□□□ -2.14
HDGFL3Q9Y3E1 AC055731.1-201ENST00000474387 401 ntBASIC1.68□□□□□ -2.14
HDGFL3Q9Y3E1 UBL5P3-201ENST00000475112 231 ntBASIC1.68□□□□□ -2.14
HDGFL3Q9Y3E1 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
HDGFL3Q9Y3E1 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC1.68□□□□□ -2.14
HDGFL3Q9Y3E1 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC1.68□□□□□ -2.14
HDGFL3Q9Y3E1 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC1.68□□□□□ -2.14
HDGFL3Q9Y3E1 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC1.68□□□□□ -2.14
HDGFL3Q9Y3E1 AL096840.1-201ENST00000603287 93 ntBASIC1.68□□□□□ -2.14
HDGFL3Q9Y3E1 SNRPGP19-201ENST00000603826 189 ntBASIC1.68□□□□□ -2.14
HDGFL3Q9Y3E1 AC103710.2-201ENST00000609912 942 ntBASIC1.68□□□□□ -2.14
HDGFL3Q9Y3E1 AL354696.1-201ENST00000614652 497 ntBASIC1.68□□□□□ -2.14
HDGFL3Q9Y3E1 AC010133.1-201ENST00000615809 842 ntBASIC1.68□□□□□ -2.14
HDGFL3Q9Y3E1 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC1.68□□□□□ -2.14
HDGFL3Q9Y3E1 AP002791.1-201ENST00000623291 381 ntBASIC1.68□□□□□ -2.14
HDGFL3Q9Y3E1 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC1.68□□□□□ -2.14
HDGFL3Q9Y3E1 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.68□□□□□ -2.14
HDGFL3Q9Y3E1 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
HDGFL3Q9Y3E1 CDR1-202ENST00000625883 1485 ntBASIC1.68□□□□□ -2.14
HDGFL3Q9Y3E1 MTND5P30-201ENST00000452896 1731 ntBASIC1.67□□□□□ -2.14
HDGFL3Q9Y3E1 RNU6-236P-201ENST00000363886 106 ntBASIC1.67□□□□□ -2.14
HDGFL3Q9Y3E1 RNU6-754P-201ENST00000391166 107 ntBASIC1.67□□□□□ -2.14
HDGFL3Q9Y3E1 RNU2-20P-201ENST00000410425 191 ntBASIC1.67□□□□□ -2.14
HDGFL3Q9Y3E1 AC007435.1-201ENST00000421086 415 ntBASIC1.67□□□□□ -2.14
HDGFL3Q9Y3E1 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC1.67□□□□□ -2.14
HDGFL3Q9Y3E1 HMGB3P12-201ENST00000438745 556 ntBASIC1.67□□□□□ -2.14
HDGFL3Q9Y3E1 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC1.67□□□□□ -2.14
HDGFL3Q9Y3E1 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC1.67□□□□□ -2.14
HDGFL3Q9Y3E1 AC007182.2-201ENST00000489251 402 ntBASIC1.67□□□□□ -2.14
HDGFL3Q9Y3E1 MTCO2P9-201ENST00000503214 694 ntBASIC1.67□□□□□ -2.14
HDGFL3Q9Y3E1 AC096571.1-202ENST00000506634 735 ntBASIC1.67□□□□□ -2.14
HDGFL3Q9Y3E1 HMGB1P28-201ENST00000507778 552 ntBASIC1.67□□□□□ -2.14
HDGFL3Q9Y3E1 RN7SKP31-201ENST00000516354 278 ntBASIC1.67□□□□□ -2.14
HDGFL3Q9Y3E1 RNU6-334P-201ENST00000517072 102 ntBASIC1.67□□□□□ -2.14
HDGFL3Q9Y3E1 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC1.67□□□□□ -2.14
HDGFL3Q9Y3E1 AP003497.1-201ENST00000528472 562 ntBASIC1.67□□□□□ -2.14
HDGFL3Q9Y3E1 SLC2A13P1-201ENST00000531560 322 ntBASIC1.67□□□□□ -2.14
HDGFL3Q9Y3E1 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC1.67□□□□□ -2.14
HDGFL3Q9Y3E1 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC1.67□□□□□ -2.14
HDGFL3Q9Y3E1 NACAP3-201ENST00000552100 481 ntBASIC1.67□□□□□ -2.14
HDGFL3Q9Y3E1 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC1.67□□□□□ -2.14
HDGFL3Q9Y3E1 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.67□□□□□ -2.14
HDGFL3Q9Y3E1 AC024619.4-201ENST00000580924 316 ntBASIC1.67□□□□□ -2.14
HDGFL3Q9Y3E1 AC105245.1-201ENST00000581934 244 ntBASIC1.67□□□□□ -2.14
HDGFL3Q9Y3E1 VN1R87P-201ENST00000596706 487 ntBASIC1.67□□□□□ -2.14
HDGFL3Q9Y3E1 RPP40P2-201ENST00000603596 712 ntBASIC1.67□□□□□ -2.14
HDGFL3Q9Y3E1 AL445435.1-201ENST00000604232 665 ntBASIC1.67□□□□□ -2.14
HDGFL3Q9Y3E1 AC024581.2-201ENST00000619986 252 ntBASIC1.67□□□□□ -2.14
HDGFL3Q9Y3E1 PISRT1-201ENST00000626175 531 ntBASIC1.67□□□□□ -2.14
HDGFL3Q9Y3E1 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC1.66□□□□□ -2.14
HDGFL3Q9Y3E1 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC1.66□□□□□ -2.14
HDGFL3Q9Y3E1 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC1.66□□□□□ -2.14
HDGFL3Q9Y3E1 UBE2Q2P1-202ENST00000354771 883 ntBASIC1.66□□□□□ -2.14
HDGFL3Q9Y3E1 MIR583-201ENST00000384846 75 ntBASIC1.66□□□□□ -2.14
HDGFL3Q9Y3E1 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
HDGFL3Q9Y3E1 RNU2-42P-201ENST00000410697 113 ntBASIC1.66□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms