Protein–RNA interactions for Protein: Q9H8Y1

VRTN, Vertnin, humanhuman

Predictions only

Length 702 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRTNQ9H8Y1 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC5.13□□□□□ -1.59
VRTNQ9H8Y1 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
VRTNQ9H8Y1 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
VRTNQ9H8Y1 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
VRTNQ9H8Y1 RNU6-336P-201ENST00000364891 107 ntBASIC5.13□□□□□ -1.59
VRTNQ9H8Y1 RNA5SP239-201ENST00000410218 129 ntBASIC5.13□□□□□ -1.59
VRTNQ9H8Y1 TEX41-205ENST00000431734 529 ntTSL 4 BASIC5.13□□□□□ -1.59
VRTNQ9H8Y1 RNA5SP249-201ENST00000516127 99 ntBASIC5.13□□□□□ -1.59
VRTNQ9H8Y1 RN7SKP289-201ENST00000517244 295 ntBASIC5.13□□□□□ -1.59
VRTNQ9H8Y1 AC034114.1-201ENST00000520293 285 ntBASIC5.13□□□□□ -1.59
VRTNQ9H8Y1 AP001880.2-201ENST00000538233 448 ntBASIC5.13□□□□□ -1.59
VRTNQ9H8Y1 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC5.13□□□□□ -1.59
VRTNQ9H8Y1 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC5.13□□□□□ -1.59
VRTNQ9H8Y1 AC133555.2-201ENST00000550213 292 ntBASIC5.13□□□□□ -1.59
VRTNQ9H8Y1 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
VRTNQ9H8Y1 AC093249.4-201ENST00000564755 259 ntBASIC5.13□□□□□ -1.59
VRTNQ9H8Y1 SCARNA4-202ENST00000625402 129 ntBASIC5.13□□□□□ -1.59
VRTNQ9H8Y1 AC243829.7-201ENST00000633081 225 ntBASIC5.13□□□□□ -1.59
VRTNQ9H8Y1 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
VRTNQ9H8Y1 OR51H2P-202ENST00000641424 3046 ntBASIC5.13□□□□□ -1.59
VRTNQ9H8Y1 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.13□□□□□ -1.59
VRTNQ9H8Y1 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
VRTNQ9H8Y1 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
VRTNQ9H8Y1 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC5.13□□□□□ -1.59
VRTNQ9H8Y1 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
VRTNQ9H8Y1 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC5.13□□□□□ -1.59
VRTNQ9H8Y1 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
VRTNQ9H8Y1 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.13□□□□□ -1.59
VRTNQ9H8Y1 Z75746.1-201ENST00000440243 2080 ntBASIC5.12□□□□□ -1.59
VRTNQ9H8Y1 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.12□□□□□ -1.59
VRTNQ9H8Y1 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
VRTNQ9H8Y1 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.12□□□□□ -1.59
VRTNQ9H8Y1 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC5.12□□□□□ -1.59
VRTNQ9H8Y1 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
VRTNQ9H8Y1 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
VRTNQ9H8Y1 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
VRTNQ9H8Y1 Y_RNA.123-201ENST00000363338 102 ntBASIC5.12□□□□□ -1.59
VRTNQ9H8Y1 UBBP2-201ENST00000376781 231 ntBASIC5.12□□□□□ -1.59
VRTNQ9H8Y1 RNU6-72P-201ENST00000384285 79 ntBASIC5.12□□□□□ -1.59
VRTNQ9H8Y1 AL590762.2-201ENST00000395798 571 ntBASIC5.12□□□□□ -1.59
VRTNQ9H8Y1 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC5.12□□□□□ -1.59
VRTNQ9H8Y1 AC005154.2-201ENST00000438110 379 ntBASIC5.12□□□□□ -1.59
VRTNQ9H8Y1 ENSA-210ENST00000503241 574 ntTSL 3 BASIC5.12□□□□□ -1.59
VRTNQ9H8Y1 AC091868.1-201ENST00000508746 304 ntBASIC5.12□□□□□ -1.59
VRTNQ9H8Y1 IGKV2D-19-201ENST00000523346 262 ntBASIC5.12□□□□□ -1.59
VRTNQ9H8Y1 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC5.12□□□□□ -1.59
VRTNQ9H8Y1 AC105129.1-201ENST00000560250 297 ntBASIC5.12□□□□□ -1.59
VRTNQ9H8Y1 UBE2Q2P8-201ENST00000560644 102 ntBASIC5.12□□□□□ -1.59
VRTNQ9H8Y1 MIR4480-201ENST00000582492 71 ntBASIC5.12□□□□□ -1.59
VRTNQ9H8Y1 AL731566.2-201ENST00000618971 317 ntBASIC5.12□□□□□ -1.59
VRTNQ9H8Y1 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
VRTNQ9H8Y1 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC5.12□□□□□ -1.59
VRTNQ9H8Y1 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC5.12□□□□□ -1.59
VRTNQ9H8Y1 FAM35BP-202ENST00000497389 3337 ntBASIC5.12□□□□□ -1.59
VRTNQ9H8Y1 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
VRTNQ9H8Y1 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
VRTNQ9H8Y1 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
VRTNQ9H8Y1 AP000560.1-201ENST00000624150 1937 ntBASIC5.11□□□□□ -1.59
VRTNQ9H8Y1 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
VRTNQ9H8Y1 USP8-204ENST00000425032 3559 ntTSL 2 BASIC5.11□□□□□ -1.59
VRTNQ9H8Y1 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC5.11□□□□□ -1.59
VRTNQ9H8Y1 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
VRTNQ9H8Y1 RNU6-78P-201ENST00000362897 107 ntBASIC5.11□□□□□ -1.59
VRTNQ9H8Y1 RNU1-76P-201ENST00000362903 159 ntBASIC5.11□□□□□ -1.59
VRTNQ9H8Y1 RNVU1-6-201ENST00000364688 164 ntBASIC5.11□□□□□ -1.59
VRTNQ9H8Y1 U3.13-201ENST00000364804 214 ntBASIC5.11□□□□□ -1.59
VRTNQ9H8Y1 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC5.11□□□□□ -1.59
VRTNQ9H8Y1 RNU6-708P-201ENST00000384217 107 ntBASIC5.11□□□□□ -1.59
VRTNQ9H8Y1 RNU6-611P-201ENST00000384276 104 ntBASIC5.11□□□□□ -1.59
VRTNQ9H8Y1 RNU6-1026P-201ENST00000384465 108 ntBASIC5.11□□□□□ -1.59
VRTNQ9H8Y1 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
VRTNQ9H8Y1 SNORA12.2-201ENST00000391040 156 ntBASIC5.11□□□□□ -1.59
VRTNQ9H8Y1 MIR190B-201ENST00000401119 79 ntBASIC5.11□□□□□ -1.59
VRTNQ9H8Y1 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC5.11□□□□□ -1.59
VRTNQ9H8Y1 ARL5AP4-201ENST00000430731 512 ntBASIC5.11□□□□□ -1.59
VRTNQ9H8Y1 AC124916.1-201ENST00000444020 547 ntBASIC5.11□□□□□ -1.59
VRTNQ9H8Y1 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC5.11□□□□□ -1.59
VRTNQ9H8Y1 RNA5SP103-201ENST00000459503 118 ntBASIC5.11□□□□□ -1.59
VRTNQ9H8Y1 IGLV2-34-201ENST00000490007 283 ntBASIC5.11□□□□□ -1.59
VRTNQ9H8Y1 AC020890.1-201ENST00000491837 504 ntBASIC5.11□□□□□ -1.59
VRTNQ9H8Y1 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC5.11□□□□□ -1.59
VRTNQ9H8Y1 AC074250.1-201ENST00000511117 192 ntBASIC5.11□□□□□ -1.59
VRTNQ9H8Y1 Y_RNA.680-201ENST00000516441 93 ntBASIC5.11□□□□□ -1.59
VRTNQ9H8Y1 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC5.11□□□□□ -1.59
VRTNQ9H8Y1 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC5.11□□□□□ -1.59
VRTNQ9H8Y1 AL110118.1-201ENST00000553543 400 ntBASIC5.11□□□□□ -1.59
VRTNQ9H8Y1 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC5.11□□□□□ -1.59
VRTNQ9H8Y1 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC5.11□□□□□ -1.59
VRTNQ9H8Y1 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC5.11□□□□□ -1.59
VRTNQ9H8Y1 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC5.11□□□□□ -1.59
VRTNQ9H8Y1 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
VRTNQ9H8Y1 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
VRTNQ9H8Y1 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
VRTNQ9H8Y1 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.11□□□□□ -1.59
VRTNQ9H8Y1 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
VRTNQ9H8Y1 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
VRTNQ9H8Y1 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
VRTNQ9H8Y1 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
VRTNQ9H8Y1 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
VRTNQ9H8Y1 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms