Protein–RNA interactions for Protein: Q9H2S5

RNF39, RING finger protein 39, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39Q9H2S5 AL591848.4-201ENST00000567832 3472 ntBASIC6.86□□□□□ -1.31
RNF39Q9H2S5 ZBTB25-204ENST00000608382 10372 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
RNF39Q9H2S5 KAT7-203ENST00000435742 3638 ntTSL 2 BASIC6.86□□□□□ -1.31
RNF39Q9H2S5 ZNF148-201ENST00000360647 9651 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
RNF39Q9H2S5 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
RNF39Q9H2S5 AC011455.2-201ENST00000599320 3336 ntBASIC6.85□□□□□ -1.31
RNF39Q9H2S5 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC6.85□□□□□ -1.31
RNF39Q9H2S5 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC6.85□□□□□ -1.31
RNF39Q9H2S5 BDNF-212ENST00000525528 4766 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
RNF39Q9H2S5 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
RNF39Q9H2S5 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
RNF39Q9H2S5 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC6.85□□□□□ -1.31
RNF39Q9H2S5 AC010401.2-201ENST00000575137 4934 ntBASIC6.85□□□□□ -1.31
RNF39Q9H2S5 RNU6-622P-201ENST00000384272 103 ntBASIC6.85□□□□□ -1.31
RNF39Q9H2S5 RNU6-1190P-201ENST00000410811 104 ntBASIC6.85□□□□□ -1.31
RNF39Q9H2S5 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC6.85□□□□□ -1.31
RNF39Q9H2S5 KRTAP8-2P-201ENST00000440620 186 ntBASIC6.85□□□□□ -1.31
RNF39Q9H2S5 RPS4XP11-201ENST00000446897 772 ntBASIC6.85□□□□□ -1.31
RNF39Q9H2S5 CBX1-205ENST00000495350 550 ntTSL 2 BASIC6.85□□□□□ -1.31
RNF39Q9H2S5 RNU4ATAC18P-201ENST00000516179 126 ntBASIC6.85□□□□□ -1.31
RNF39Q9H2S5 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC6.85□□□□□ -1.31
RNF39Q9H2S5 SNORA74.4-201ENST00000607595 199 ntBASIC6.85□□□□□ -1.31
RNF39Q9H2S5 U73479.1-201ENST00000618062 168 ntBASIC6.85□□□□□ -1.31
RNF39Q9H2S5 NAV2-202ENST00000360655 10667 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
RNF39Q9H2S5 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC6.85□□□□□ -1.31
RNF39Q9H2S5 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC6.85□□□□□ -1.31
RNF39Q9H2S5 CDK12-202ENST00000447079 8336 ntAPPRIS P3 TSL 1 (best) BASIC6.85□□□□□ -1.31
RNF39Q9H2S5 PLCH1-206ENST00000494598 3525 ntTSL 5 BASIC6.85□□□□□ -1.31
RNF39Q9H2S5 ZNF410-202ENST00000334521 2193 ntTSL 5 BASIC6.85□□□□□ -1.31
RNF39Q9H2S5 RSF1-201ENST00000308488 11550 ntAPPRIS P2 TSL 1 (best) BASIC6.85□□□□□ -1.31
RNF39Q9H2S5 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC6.85□□□□□ -1.31
RNF39Q9H2S5 NKRF-204ENST00000542113 3351 ntTSL 3 BASIC6.85□□□□□ -1.31
RNF39Q9H2S5 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
RNF39Q9H2S5 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC6.85□□□□□ -1.31
RNF39Q9H2S5 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC6.84□□□□□ -1.31
RNF39Q9H2S5 ATF7IP2-203ENST00000396559 3641 ntTSL 2 BASIC6.84□□□□□ -1.31
RNF39Q9H2S5 GARNL3-205ENST00000435213 3599 ntTSL 2 BASIC6.84□□□□□ -1.31
RNF39Q9H2S5 ARHGAP32-203ENST00000524655 8194 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
RNF39Q9H2S5 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
RNF39Q9H2S5 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.31
RNF39Q9H2S5 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC6.84□□□□□ -1.31
RNF39Q9H2S5 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
RNF39Q9H2S5 GDA-209ENST00000545168 5362 ntTSL 2 BASIC6.84□□□□□ -1.31
RNF39Q9H2S5 EYA3-204ENST00000436342 5943 ntTSL 2 BASIC6.84□□□□□ -1.31
RNF39Q9H2S5 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC6.84□□□□□ -1.31
RNF39Q9H2S5 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
RNF39Q9H2S5 AP4E1-203ENST00000560508 6653 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
RNF39Q9H2S5 RNU6-1313P-201ENST00000362622 102 ntBASIC6.84□□□□□ -1.31
RNF39Q9H2S5 SNORA14A-201ENST00000364773 135 ntBASIC6.84□□□□□ -1.31
RNF39Q9H2S5 RNU6-117P-201ENST00000365415 107 ntBASIC6.84□□□□□ -1.31
RNF39Q9H2S5 SNORA51.9-201ENST00000384295 124 ntBASIC6.84□□□□□ -1.31
RNF39Q9H2S5 NME1P1-201ENST00000420914 382 ntBASIC6.84□□□□□ -1.31
RNF39Q9H2S5 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC6.84□□□□□ -1.31
RNF39Q9H2S5 AC023141.3-201ENST00000436698 278 ntBASIC6.84□□□□□ -1.31
RNF39Q9H2S5 RBMY2UP-201ENST00000453474 324 ntBASIC6.84□□□□□ -1.31
RNF39Q9H2S5 RN7SL326P-201ENST00000477493 296 ntBASIC6.84□□□□□ -1.31
RNF39Q9H2S5 IGKV1D-22-201ENST00000518953 324 ntBASIC6.84□□□□□ -1.31
RNF39Q9H2S5 AC011604.1-201ENST00000545978 196 ntBASIC6.84□□□□□ -1.31
RNF39Q9H2S5 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC6.84□□□□□ -1.31
RNF39Q9H2S5 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.31
RNF39Q9H2S5 AL627230.6-201ENST00000611129 280 ntBASIC6.84□□□□□ -1.31
RNF39Q9H2S5 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.31
RNF39Q9H2S5 MIR664A-201ENST00000626086 82 ntBASIC6.84□□□□□ -1.31
RNF39Q9H2S5 ZNF507-203ENST00000544431 5764 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
RNF39Q9H2S5 MAPK10-323ENST00000641493 3207 ntBASIC6.84□□□□□ -1.31
RNF39Q9H2S5 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC6.84□□□□□ -1.31
RNF39Q9H2S5 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
RNF39Q9H2S5 MAPK10-344ENST00000641718 3746 ntBASIC6.84□□□□□ -1.31
RNF39Q9H2S5 IL31RA-203ENST00000359040 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
RNF39Q9H2S5 NBPF9-206ENST00000613969 4624 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
RNF39Q9H2S5 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
RNF39Q9H2S5 AL359551.1-201ENST00000442726 2900 ntTSL 2 BASIC6.83□□□□□ -1.32
RNF39Q9H2S5 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
RNF39Q9H2S5 GPNMB-201ENST00000258733 2862 ntAPPRIS P3 TSL 1 (best) BASIC6.83□□□□□ -1.32
RNF39Q9H2S5 DDX58-202ENST00000379883 4353 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
RNF39Q9H2S5 HNRNPR-210ENST00000478691 7646 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
RNF39Q9H2S5 ADGRL3-207ENST00000507625 4843 ntAPPRIS ALT2 TSL 5 BASIC6.83□□□□□ -1.32
RNF39Q9H2S5 AC118273.1-201ENST00000525324 3006 ntBASIC6.83□□□□□ -1.32
RNF39Q9H2S5 NPHP1-203ENST00000393272 2752 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
RNF39Q9H2S5 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
RNF39Q9H2S5 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC6.83□□□□□ -1.32
RNF39Q9H2S5 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC6.83□□□□□ -1.32
RNF39Q9H2S5 ARPP21-201ENST00000187397 3433 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
RNF39Q9H2S5 MEF2C-201ENST00000340208 6192 ntAPPRIS ALT1 TSL 1 (best) BASIC6.83□□□□□ -1.32
RNF39Q9H2S5 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
RNF39Q9H2S5 RNU6-624P-201ENST00000363411 107 ntBASIC6.83□□□□□ -1.32
RNF39Q9H2S5 RNU6ATAC10P-201ENST00000408635 111 ntBASIC6.83□□□□□ -1.32
RNF39Q9H2S5 U3.43-201ENST00000410734 213 ntBASIC6.83□□□□□ -1.32
RNF39Q9H2S5 AL445584.1-201ENST00000431451 330 ntBASIC6.83□□□□□ -1.32
RNF39Q9H2S5 EIF5AP4-201ENST00000441206 465 ntBASIC6.83□□□□□ -1.32
RNF39Q9H2S5 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC6.83□□□□□ -1.32
RNF39Q9H2S5 CYCSP38-201ENST00000559840 322 ntBASIC6.83□□□□□ -1.32
RNF39Q9H2S5 AL132640.3-201ENST00000630473 177 ntBASIC6.83□□□□□ -1.32
RNF39Q9H2S5 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
RNF39Q9H2S5 GAPVD1-202ENST00000297933 6003 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
RNF39Q9H2S5 PLCB1-202ENST00000378637 3864 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
RNF39Q9H2S5 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC6.83□□□□□ -1.32
RNF39Q9H2S5 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC6.83□□□□□ -1.32
RNF39Q9H2S5 IPCEF1-201ENST00000265198 6689 ntAPPRIS P3 TSL 1 (best) BASIC6.83□□□□□ -1.32
RNF39Q9H2S5 SH3D19-210ENST00000514152 5107 ntAPPRIS ALT1 TSL 2 BASIC6.83□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 94.6 ms