Protein–RNA interactions for Protein: Q9BTX1

NDC1, Nucleoporin NDC1, humanhuman

Predictions only

Length 674 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1Q9BTX1 RNU6-434P-201ENST00000384376 107 ntBASIC3.89□□□□□ -1.79
NDC1Q9BTX1 RN7SKP202-201ENST00000410439 330 ntBASIC3.89□□□□□ -1.79
NDC1Q9BTX1 RPLP0P7-201ENST00000416050 667 ntBASIC3.89□□□□□ -1.79
NDC1Q9BTX1 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC3.89□□□□□ -1.79
NDC1Q9BTX1 AL669831.1-202ENST00000428504 417 ntBASIC3.89□□□□□ -1.79
NDC1Q9BTX1 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC3.89□□□□□ -1.79
NDC1Q9BTX1 RPL7P28-201ENST00000437739 740 ntBASIC3.89□□□□□ -1.79
NDC1Q9BTX1 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC3.89□□□□□ -1.79
NDC1Q9BTX1 RNU7-167P-201ENST00000459160 62 ntBASIC3.89□□□□□ -1.79
NDC1Q9BTX1 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC3.89□□□□□ -1.79
NDC1Q9BTX1 AC104472.2-201ENST00000469035 601 ntBASIC3.89□□□□□ -1.79
NDC1Q9BTX1 RN7SL585P-201ENST00000470538 280 ntBASIC3.89□□□□□ -1.79
NDC1Q9BTX1 RN7SL132P-201ENST00000478131 296 ntBASIC3.89□□□□□ -1.79
NDC1Q9BTX1 AC108860.1-201ENST00000484521 383 ntBASIC3.89□□□□□ -1.79
NDC1Q9BTX1 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.89□□□□□ -1.79
NDC1Q9BTX1 AC021146.2-201ENST00000504736 556 ntBASIC3.89□□□□□ -1.79
NDC1Q9BTX1 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC3.89□□□□□ -1.79
NDC1Q9BTX1 SNORA14.1-201ENST00000516113 141 ntBASIC3.89□□□□□ -1.79
NDC1Q9BTX1 RNU6-1069P-201ENST00000516612 133 ntBASIC3.89□□□□□ -1.79
NDC1Q9BTX1 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.89□□□□□ -1.79
NDC1Q9BTX1 RNU6-988P-201ENST00000519081 107 ntBASIC3.89□□□□□ -1.79
NDC1Q9BTX1 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC3.89□□□□□ -1.79
NDC1Q9BTX1 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.89□□□□□ -1.79
NDC1Q9BTX1 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.89□□□□□ -1.79
NDC1Q9BTX1 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.89□□□□□ -1.79
NDC1Q9BTX1 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC3.89□□□□□ -1.79
NDC1Q9BTX1 RPL23AP87-202ENST00000573039 466 ntBASIC3.89□□□□□ -1.79
NDC1Q9BTX1 AC025627.2-201ENST00000576220 160 ntBASIC3.89□□□□□ -1.79
NDC1Q9BTX1 MIR5684-201ENST00000585074 65 ntBASIC3.89□□□□□ -1.79
NDC1Q9BTX1 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC3.89□□□□□ -1.79
NDC1Q9BTX1 AC098657.3-201ENST00000620434 263 ntBASIC3.89□□□□□ -1.79
NDC1Q9BTX1 AC103858.2-201ENST00000621471 543 ntBASIC3.89□□□□□ -1.79
NDC1Q9BTX1 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
NDC1Q9BTX1 AC016588.2-201ENST00000632484 3021 ntBASIC3.89□□□□□ -1.79
NDC1Q9BTX1 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
NDC1Q9BTX1 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.89□□□□□ -1.79
NDC1Q9BTX1 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC3.88□□□□□ -1.79
NDC1Q9BTX1 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC3.88□□□□□ -1.79
NDC1Q9BTX1 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
NDC1Q9BTX1 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
NDC1Q9BTX1 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC3.88□□□□□ -1.79
NDC1Q9BTX1 HSPA8P4-201ENST00000511877 1920 ntBASIC3.88□□□□□ -1.79
NDC1Q9BTX1 RNU6-562P-201ENST00000362731 107 ntBASIC3.88□□□□□ -1.79
NDC1Q9BTX1 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC3.88□□□□□ -1.79
NDC1Q9BTX1 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.88□□□□□ -1.79
NDC1Q9BTX1 RNU6-1279P-201ENST00000383917 103 ntBASIC3.88□□□□□ -1.79
NDC1Q9BTX1 RNU6-1181P-201ENST00000384191 106 ntBASIC3.88□□□□□ -1.79
NDC1Q9BTX1 RNU6-310P-201ENST00000384655 107 ntBASIC3.88□□□□□ -1.79
NDC1Q9BTX1 MIR554-201ENST00000384874 96 ntBASIC3.88□□□□□ -1.79
NDC1Q9BTX1 HSPE1P8-201ENST00000406997 288 ntBASIC3.88□□□□□ -1.79
NDC1Q9BTX1 Y_RNA.646-201ENST00000410980 101 ntBASIC3.88□□□□□ -1.79
NDC1Q9BTX1 AC080125.1-201ENST00000414888 684 ntBASIC3.88□□□□□ -1.79
NDC1Q9BTX1 AL691449.1-201ENST00000426570 421 ntBASIC3.88□□□□□ -1.79
NDC1Q9BTX1 SNAP23P1-201ENST00000433229 246 ntBASIC3.88□□□□□ -1.79
NDC1Q9BTX1 AL591212.2-201ENST00000433923 257 ntBASIC3.88□□□□□ -1.79
NDC1Q9BTX1 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC3.88□□□□□ -1.79
NDC1Q9BTX1 PRDX3P3-201ENST00000447765 522 ntBASIC3.88□□□□□ -1.79
NDC1Q9BTX1 AL451050.1-201ENST00000450126 415 ntBASIC3.88□□□□□ -1.79
NDC1Q9BTX1 OARD1-209ENST00000471367 401 ntTSL 2 BASIC3.88□□□□□ -1.79
NDC1Q9BTX1 AC117503.1-201ENST00000472241 394 ntBASIC3.88□□□□□ -1.79
NDC1Q9BTX1 RPL7P42-201ENST00000481005 679 ntBASIC3.88□□□□□ -1.79
NDC1Q9BTX1 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.88□□□□□ -1.79
NDC1Q9BTX1 PTP4A1P4-201ENST00000512479 322 ntBASIC3.88□□□□□ -1.79
NDC1Q9BTX1 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
NDC1Q9BTX1 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC3.88□□□□□ -1.79
NDC1Q9BTX1 IL7-206ENST00000520269 456 ntTSL 3 BASIC3.88□□□□□ -1.79
NDC1Q9BTX1 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC3.88□□□□□ -1.79
NDC1Q9BTX1 MTCO3P23-201ENST00000561363 289 ntBASIC3.88□□□□□ -1.79
NDC1Q9BTX1 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC3.88□□□□□ -1.79
NDC1Q9BTX1 AC006130.2-201ENST00000586202 326 ntBASIC3.88□□□□□ -1.79
NDC1Q9BTX1 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.88□□□□□ -1.79
NDC1Q9BTX1 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
NDC1Q9BTX1 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC3.88□□□□□ -1.79
NDC1Q9BTX1 MIR7151-201ENST00000617477 60 ntBASIC3.88□□□□□ -1.79
NDC1Q9BTX1 MIR6875-201ENST00000617506 72 ntBASIC3.88□□□□□ -1.79
NDC1Q9BTX1 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
NDC1Q9BTX1 AC010378.1-201ENST00000619270 362 ntBASIC3.88□□□□□ -1.79
NDC1Q9BTX1 AL360181.4-201ENST00000621752 134 ntBASIC3.88□□□□□ -1.79
NDC1Q9BTX1 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC3.88□□□□□ -1.79
NDC1Q9BTX1 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
NDC1Q9BTX1 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
NDC1Q9BTX1 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
NDC1Q9BTX1 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.88□□□□□ -1.79
NDC1Q9BTX1 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
NDC1Q9BTX1 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
NDC1Q9BTX1 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC3.87□□□□□ -1.79
NDC1Q9BTX1 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
NDC1Q9BTX1 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC3.87□□□□□ -1.79
NDC1Q9BTX1 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.87□□□□□ -1.79
NDC1Q9BTX1 MTND4P1-201ENST00000457501 1466 ntBASIC3.87□□□□□ -1.79
NDC1Q9BTX1 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
NDC1Q9BTX1 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
NDC1Q9BTX1 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
NDC1Q9BTX1 DEFB108F-201ENST00000344638 222 ntBASIC3.87□□□□□ -1.79
NDC1Q9BTX1 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
NDC1Q9BTX1 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.87□□□□□ -1.79
NDC1Q9BTX1 AL356057.3-201ENST00000402607 340 ntBASIC3.87□□□□□ -1.79
NDC1Q9BTX1 AL391417.1-201ENST00000404100 426 ntBASIC3.87□□□□□ -1.79
NDC1Q9BTX1 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.87□□□□□ -1.79
NDC1Q9BTX1 RNU4-6P-201ENST00000410804 122 ntBASIC3.87□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms