Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
PHOX2BQ99453 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC5.55□□□□□ -1.52
PHOX2BQ99453 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
PHOX2BQ99453 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
PHOX2BQ99453 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
PHOX2BQ99453 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC5.55□□□□□ -1.52
PHOX2BQ99453 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
PHOX2BQ99453 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
PHOX2BQ99453 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
PHOX2BQ99453 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
PHOX2BQ99453 AL359837.1-201ENST00000381357 287 ntBASIC5.55□□□□□ -1.52
PHOX2BQ99453 SNORA16A-201ENST00000384342 137 ntBASIC5.55□□□□□ -1.52
PHOX2BQ99453 HLFP1-201ENST00000402375 499 ntBASIC5.55□□□□□ -1.52
PHOX2BQ99453 AL357139.1-201ENST00000407792 426 ntBASIC5.55□□□□□ -1.52
PHOX2BQ99453 EIF4A1P3-201ENST00000411521 244 ntBASIC5.55□□□□□ -1.52
PHOX2BQ99453 RPL7AP61-201ENST00000443410 636 ntBASIC5.55□□□□□ -1.52
PHOX2BQ99453 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC5.55□□□□□ -1.52
PHOX2BQ99453 AC016632.1-201ENST00000503994 196 ntBASIC5.55□□□□□ -1.52
PHOX2BQ99453 AC097462.2-201ENST00000504623 481 ntBASIC5.55□□□□□ -1.52
PHOX2BQ99453 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC5.55□□□□□ -1.52
PHOX2BQ99453 RNU4ATAC15P-201ENST00000516415 126 ntBASIC5.55□□□□□ -1.52
PHOX2BQ99453 RNU6-1183P-201ENST00000517054 60 ntBASIC5.55□□□□□ -1.52
PHOX2BQ99453 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC5.55□□□□□ -1.52
PHOX2BQ99453 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC5.55□□□□□ -1.52
PHOX2BQ99453 CYCSP39-201ENST00000565821 309 ntBASIC5.55□□□□□ -1.52
PHOX2BQ99453 MIR5571-201ENST00000577998 113 ntBASIC5.55□□□□□ -1.52
PHOX2BQ99453 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC5.55□□□□□ -1.52
PHOX2BQ99453 KLKP1-201ENST00000595979 403 ntBASIC5.55□□□□□ -1.52
PHOX2BQ99453 AC005828.6-201ENST00000606610 232 ntBASIC5.55□□□□□ -1.52
PHOX2BQ99453 UBE2Q2P6-201ENST00000612666 153 ntBASIC5.55□□□□□ -1.52
PHOX2BQ99453 AC109583.2-201ENST00000617367 129 ntBASIC5.55□□□□□ -1.52
PHOX2BQ99453 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5.55□□□□□ -1.52
PHOX2BQ99453 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
PHOX2BQ99453 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.55□□□□□ -1.52
PHOX2BQ99453 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
PHOX2BQ99453 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
PHOX2BQ99453 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
PHOX2BQ99453 ZNF204P-201ENST00000416749 2397 ntBASIC5.55□□□□□ -1.52
PHOX2BQ99453 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
PHOX2BQ99453 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
PHOX2BQ99453 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
PHOX2BQ99453 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
PHOX2BQ99453 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
PHOX2BQ99453 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
PHOX2BQ99453 RNU6-961P-201ENST00000363893 105 ntBASIC5.54□□□□□ -1.52
PHOX2BQ99453 SNORA72.2-201ENST00000365028 127 ntBASIC5.54□□□□□ -1.52
PHOX2BQ99453 Y_RNA.357-201ENST00000365487 109 ntBASIC5.54□□□□□ -1.52
PHOX2BQ99453 RNA5SP30-201ENST00000365552 115 ntBASIC5.54□□□□□ -1.52
PHOX2BQ99453 U8.10-201ENST00000384260 133 ntBASIC5.54□□□□□ -1.52
PHOX2BQ99453 Y_RNA.568-201ENST00000384742 113 ntBASIC5.54□□□□□ -1.52
PHOX2BQ99453 MIR134-201ENST00000385258 73 ntBASIC5.54□□□□□ -1.52
PHOX2BQ99453 RNU6-1168P-201ENST00000390831 104 ntBASIC5.54□□□□□ -1.52
PHOX2BQ99453 KRT8P51-201ENST00000438938 274 ntBASIC5.54□□□□□ -1.52
PHOX2BQ99453 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC5.54□□□□□ -1.52
PHOX2BQ99453 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC5.54□□□□□ -1.52
PHOX2BQ99453 RN7SL570P-201ENST00000484405 292 ntBASIC5.54□□□□□ -1.52
PHOX2BQ99453 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC5.54□□□□□ -1.52
PHOX2BQ99453 SNRPGP15-201ENST00000600149 222 ntBASIC5.54□□□□□ -1.52
PHOX2BQ99453 MESTIT1_1.1-201ENST00000618871 140 ntBASIC5.54□□□□□ -1.52
PHOX2BQ99453 AC091953.5-201ENST00000622919 233 ntBASIC5.54□□□□□ -1.52
PHOX2BQ99453 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC5.54□□□□□ -1.52
PHOX2BQ99453 AL591135.1-201ENST00000401578 5914 ntBASIC5.54□□□□□ -1.52
PHOX2BQ99453 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
PHOX2BQ99453 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
PHOX2BQ99453 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
PHOX2BQ99453 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
PHOX2BQ99453 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.53□□□□□ -1.52
PHOX2BQ99453 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
PHOX2BQ99453 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.53□□□□□ -1.52
PHOX2BQ99453 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC5.53□□□□□ -1.52
PHOX2BQ99453 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
PHOX2BQ99453 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
PHOX2BQ99453 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
PHOX2BQ99453 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.53□□□□□ -1.52
PHOX2BQ99453 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
PHOX2BQ99453 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.53□□□□□ -1.52
PHOX2BQ99453 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
PHOX2BQ99453 SNORA17.1-201ENST00000362945 126 ntBASIC5.53□□□□□ -1.52
PHOX2BQ99453 RN7SKP224-201ENST00000364140 325 ntBASIC5.53□□□□□ -1.52
PHOX2BQ99453 RNU4-56P-201ENST00000364700 142 ntBASIC5.53□□□□□ -1.52
PHOX2BQ99453 SNORD32A-201ENST00000364805 84 ntBASIC5.53□□□□□ -1.52
PHOX2BQ99453 SNORA5.1-201ENST00000384275 131 ntBASIC5.53□□□□□ -1.52
PHOX2BQ99453 SNORA37-201ENST00000384504 129 ntBASIC5.53□□□□□ -1.52
PHOX2BQ99453 Y_RNA.571-201ENST00000384753 98 ntBASIC5.53□□□□□ -1.52
PHOX2BQ99453 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC5.53□□□□□ -1.52
PHOX2BQ99453 AL162725.1-201ENST00000435405 301 ntBASIC5.53□□□□□ -1.52
PHOX2BQ99453 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC5.53□□□□□ -1.52
PHOX2BQ99453 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC5.53□□□□□ -1.52
PHOX2BQ99453 SNORA70.16-201ENST00000516390 95 ntBASIC5.53□□□□□ -1.52
PHOX2BQ99453 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC5.53□□□□□ -1.52
PHOX2BQ99453 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC5.53□□□□□ -1.52
PHOX2BQ99453 AC024940.3-201ENST00000538551 316 ntBASIC5.53□□□□□ -1.52
PHOX2BQ99453 AC233702.2-202ENST00000562547 291 ntBASIC5.53□□□□□ -1.52
PHOX2BQ99453 AC011487.3-201ENST00000593607 453 ntBASIC5.53□□□□□ -1.52
PHOX2BQ99453 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC5.53□□□□□ -1.52
PHOX2BQ99453 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC5.53□□□□□ -1.52
PHOX2BQ99453 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
PHOX2BQ99453 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
PHOX2BQ99453 USP8-204ENST00000425032 3559 ntTSL 2 BASIC5.53□□□□□ -1.52
PHOX2BQ99453 MARK2P15-201ENST00000432204 2186 ntBASIC5.53□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms