Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 AL356274.2-201ENST00000624379 3752 ntBASIC3.08□□□□□ -1.92
TM9SF4Q92544 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
TM9SF4Q92544 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
TM9SF4Q92544 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC3.08□□□□□ -1.92
TM9SF4Q92544 AC002546.1-201ENST00000588041 2504 ntBASIC3.08□□□□□ -1.92
TM9SF4Q92544 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
TM9SF4Q92544 RNA5SP374-201ENST00000362939 125 ntBASIC3.07□□□□□ -1.92
TM9SF4Q92544 U3.11-201ENST00000364476 212 ntBASIC3.07□□□□□ -1.92
TM9SF4Q92544 RNU6-534P-201ENST00000364877 106 ntBASIC3.07□□□□□ -1.92
TM9SF4Q92544 Y_RNA.303-201ENST00000364998 94 ntBASIC3.07□□□□□ -1.92
TM9SF4Q92544 RNU1-140P-201ENST00000365040 165 ntBASIC3.07□□□□□ -1.92
TM9SF4Q92544 Y_RNA.367-201ENST00000365544 101 ntBASIC3.07□□□□□ -1.92
TM9SF4Q92544 Y_RNA.453-201ENST00000384223 109 ntBASIC3.07□□□□□ -1.92
TM9SF4Q92544 RNU6-882P-201ENST00000391025 103 ntBASIC3.07□□□□□ -1.92
TM9SF4Q92544 AL109755.1-201ENST00000401791 649 ntBASIC3.07□□□□□ -1.92
TM9SF4Q92544 AL138885.1-201ENST00000405921 675 ntBASIC3.07□□□□□ -1.92
TM9SF4Q92544 RNU2-43P-201ENST00000410306 190 ntBASIC3.07□□□□□ -1.92
TM9SF4Q92544 RNU4-65P-201ENST00000410473 140 ntBASIC3.07□□□□□ -1.92
TM9SF4Q92544 Y_RNA.604-201ENST00000410574 102 ntBASIC3.07□□□□□ -1.92
TM9SF4Q92544 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.07□□□□□ -1.92
TM9SF4Q92544 AL356968.1-201ENST00000416622 474 ntBASIC3.07□□□□□ -1.92
TM9SF4Q92544 SDCBPP3-201ENST00000419629 891 ntBASIC3.07□□□□□ -1.92
TM9SF4Q92544 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC3.07□□□□□ -1.92
TM9SF4Q92544 TRIAP1P1-201ENST00000427062 225 ntBASIC3.07□□□□□ -1.92
TM9SF4Q92544 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC3.07□□□□□ -1.92
TM9SF4Q92544 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.07□□□□□ -1.92
TM9SF4Q92544 AC090774.1-201ENST00000435925 246 ntBASIC3.07□□□□□ -1.92
TM9SF4Q92544 HMGB1P31-201ENST00000437242 427 ntBASIC3.07□□□□□ -1.92
TM9SF4Q92544 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.07□□□□□ -1.92
TM9SF4Q92544 AC016696.1-201ENST00000446949 318 ntBASIC3.07□□□□□ -1.92
TM9SF4Q92544 RPL23AP20-201ENST00000447965 421 ntBASIC3.07□□□□□ -1.92
TM9SF4Q92544 AL162389.1-201ENST00000449233 177 ntBASIC3.07□□□□□ -1.92
TM9SF4Q92544 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC3.07□□□□□ -1.92
TM9SF4Q92544 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC3.07□□□□□ -1.92
TM9SF4Q92544 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC3.07□□□□□ -1.92
TM9SF4Q92544 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC3.07□□□□□ -1.92
TM9SF4Q92544 RNU6-1178P-201ENST00000516674 107 ntBASIC3.07□□□□□ -1.92
TM9SF4Q92544 SNORA31.20-201ENST00000517111 133 ntBASIC3.07□□□□□ -1.92
TM9SF4Q92544 SCARNA20.6-201ENST00000517251 106 ntBASIC3.07□□□□□ -1.92
TM9SF4Q92544 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.07□□□□□ -1.92
TM9SF4Q92544 AC109635.3-201ENST00000529536 185 ntBASIC3.07□□□□□ -1.92
TM9SF4Q92544 AC104383.1-201ENST00000530297 370 ntBASIC3.07□□□□□ -1.92
TM9SF4Q92544 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.07□□□□□ -1.92
TM9SF4Q92544 AP003034.1-201ENST00000534621 422 ntBASIC3.07□□□□□ -1.92
TM9SF4Q92544 AC018630.1-201ENST00000541376 925 ntBASIC3.07□□□□□ -1.92
TM9SF4Q92544 AC123904.3-201ENST00000547218 814 ntBASIC3.07□□□□□ -1.92
TM9SF4Q92544 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC3.07□□□□□ -1.92
TM9SF4Q92544 AL157687.1-201ENST00000554853 619 ntBASIC3.07□□□□□ -1.92
TM9SF4Q92544 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC3.07□□□□□ -1.92
TM9SF4Q92544 AP005205.1-201ENST00000563503 508 ntBASIC3.07□□□□□ -1.92
TM9SF4Q92544 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC3.07□□□□□ -1.92
TM9SF4Q92544 AC025678.1-201ENST00000567861 338 ntBASIC3.07□□□□□ -1.92
TM9SF4Q92544 AC105224.1-201ENST00000587055 421 ntBASIC3.07□□□□□ -1.92
TM9SF4Q92544 AC098848.2-201ENST00000588023 330 ntBASIC3.07□□□□□ -1.92
TM9SF4Q92544 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC3.07□□□□□ -1.92
TM9SF4Q92544 AL162713.1-201ENST00000604480 262 ntBASIC3.07□□□□□ -1.92
TM9SF4Q92544 AC007621.1-201ENST00000604544 437 ntBASIC3.07□□□□□ -1.92
TM9SF4Q92544 AC007363.1-201ENST00000604736 620 ntBASIC3.07□□□□□ -1.92
TM9SF4Q92544 AC093788.1-201ENST00000609356 927 ntBASIC3.07□□□□□ -1.92
TM9SF4Q92544 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC3.07□□□□□ -1.92
TM9SF4Q92544 TUG1_2.1-201ENST00000614234 87 ntBASIC3.07□□□□□ -1.92
TM9SF4Q92544 AL603758.1-201ENST00000618654 241 ntBASIC3.07□□□□□ -1.92
TM9SF4Q92544 MIR6130-201ENST00000619419 109 ntBASIC3.07□□□□□ -1.92
TM9SF4Q92544 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC3.07□□□□□ -1.92
TM9SF4Q92544 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
TM9SF4Q92544 AC004520.1-201ENST00000608362 1413 ntBASIC3.07□□□□□ -1.92
TM9SF4Q92544 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
TM9SF4Q92544 AL136164.4-201ENST00000625013 2135 ntBASIC3.07□□□□□ -1.92
TM9SF4Q92544 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
TM9SF4Q92544 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
TM9SF4Q92544 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.06□□□□□ -1.92
TM9SF4Q92544 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.06□□□□□ -1.92
TM9SF4Q92544 MIR422A-201ENST00000362286 90 ntBASIC3.06□□□□□ -1.92
TM9SF4Q92544 Y_RNA.38-201ENST00000362617 102 ntBASIC3.06□□□□□ -1.92
TM9SF4Q92544 Y_RNA.89-201ENST00000363031 102 ntBASIC3.06□□□□□ -1.92
TM9SF4Q92544 RNY1P12-201ENST00000364251 105 ntBASIC3.06□□□□□ -1.92
TM9SF4Q92544 RNU6-7-201ENST00000364784 107 ntBASIC3.06□□□□□ -1.92
TM9SF4Q92544 RNU6-8-201ENST00000365467 107 ntBASIC3.06□□□□□ -1.92
TM9SF4Q92544 RNU6-1158P-201ENST00000391167 107 ntBASIC3.06□□□□□ -1.92
TM9SF4Q92544 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.06□□□□□ -1.92
TM9SF4Q92544 RNA5SP129-201ENST00000410276 118 ntBASIC3.06□□□□□ -1.92
TM9SF4Q92544 RNU2-62P-201ENST00000410868 191 ntBASIC3.06□□□□□ -1.92
TM9SF4Q92544 USP9YP27-201ENST00000418455 438 ntBASIC3.06□□□□□ -1.92
TM9SF4Q92544 AC099677.1-201ENST00000420575 175 ntBASIC3.06□□□□□ -1.92
TM9SF4Q92544 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.06□□□□□ -1.92
TM9SF4Q92544 AC018630.2-202ENST00000422992 927 ntBASIC3.06□□□□□ -1.92
TM9SF4Q92544 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC3.06□□□□□ -1.92
TM9SF4Q92544 AC093106.2-201ENST00000428212 385 ntBASIC3.06□□□□□ -1.92
TM9SF4Q92544 ZNF680P1-201ENST00000436625 1469 ntBASIC3.06□□□□□ -1.92
TM9SF4Q92544 RPL35AP22-201ENST00000436855 335 ntBASIC3.06□□□□□ -1.92
TM9SF4Q92544 AC004866.2-201ENST00000438285 481 ntBASIC3.06□□□□□ -1.92
TM9SF4Q92544 RPL7P54-201ENST00000438336 674 ntBASIC3.06□□□□□ -1.92
TM9SF4Q92544 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC3.06□□□□□ -1.92
TM9SF4Q92544 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC3.06□□□□□ -1.92
TM9SF4Q92544 AC008264.1-201ENST00000447612 367 ntBASIC3.06□□□□□ -1.92
TM9SF4Q92544 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC3.06□□□□□ -1.92
TM9SF4Q92544 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC3.06□□□□□ -1.92
TM9SF4Q92544 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
TM9SF4Q92544 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC3.06□□□□□ -1.92
TM9SF4Q92544 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 121.9 ms