Protein–RNA interactions for Protein: Q6ZMZ3

SYNE3, Nesprin-3, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3Q6ZMZ3 RPS20P20-201ENST00000460498 340 ntBASIC3.64□□□□□ -1.83
SYNE3Q6ZMZ3 AC019235.1-201ENST00000503847 207 ntBASIC3.64□□□□□ -1.83
SYNE3Q6ZMZ3 RNU6-840P-201ENST00000517275 65 ntBASIC3.64□□□□□ -1.83
SYNE3Q6ZMZ3 AP006587.4-201ENST00000526053 529 ntBASIC3.64□□□□□ -1.83
SYNE3Q6ZMZ3 OR5BN1P-201ENST00000532955 829 ntBASIC3.64□□□□□ -1.83
SYNE3Q6ZMZ3 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC3.64□□□□□ -1.83
SYNE3Q6ZMZ3 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC3.64□□□□□ -1.83
SYNE3Q6ZMZ3 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC3.64□□□□□ -1.83
SYNE3Q6ZMZ3 AL355836.1-201ENST00000555951 870 ntBASIC3.64□□□□□ -1.83
SYNE3Q6ZMZ3 MIR5004-201ENST00000579078 107 ntBASIC3.64□□□□□ -1.83
SYNE3Q6ZMZ3 UBL5P2-201ENST00000583788 219 ntBASIC3.64□□□□□ -1.83
SYNE3Q6ZMZ3 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.64□□□□□ -1.83
SYNE3Q6ZMZ3 BNIP3P22-201ENST00000593399 556 ntBASIC3.64□□□□□ -1.83
SYNE3Q6ZMZ3 AC007179.3-201ENST00000604976 235 ntBASIC3.64□□□□□ -1.83
SYNE3Q6ZMZ3 AP002826.1-201ENST00000608835 315 ntBASIC3.64□□□□□ -1.83
SYNE3Q6ZMZ3 AC107294.3-201ENST00000609211 526 ntBASIC3.64□□□□□ -1.83
SYNE3Q6ZMZ3 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC3.64□□□□□ -1.83
SYNE3Q6ZMZ3 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.64□□□□□ -1.83
SYNE3Q6ZMZ3 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.64□□□□□ -1.83
SYNE3Q6ZMZ3 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.63□□□□□ -1.83
SYNE3Q6ZMZ3 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
SYNE3Q6ZMZ3 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
SYNE3Q6ZMZ3 AC090740.1-201ENST00000623193 2262 ntBASIC3.63□□□□□ -1.83
SYNE3Q6ZMZ3 AC073343.1-201ENST00000328239 651 ntBASIC3.63□□□□□ -1.83
SYNE3Q6ZMZ3 SNORA70.4-201ENST00000365509 134 ntBASIC3.63□□□□□ -1.83
SYNE3Q6ZMZ3 SMIM11P1-201ENST00000369586 178 ntBASIC3.63□□□□□ -1.83
SYNE3Q6ZMZ3 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
SYNE3Q6ZMZ3 MTCO3P40-201ENST00000392516 676 ntBASIC3.63□□□□□ -1.83
SYNE3Q6ZMZ3 RPS4XP8-201ENST00000402039 771 ntBASIC3.63□□□□□ -1.83
SYNE3Q6ZMZ3 U3.42-201ENST00000408746 214 ntBASIC3.63□□□□□ -1.83
SYNE3Q6ZMZ3 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC3.63□□□□□ -1.83
SYNE3Q6ZMZ3 UBE2V1P10-201ENST00000414685 269 ntBASIC3.63□□□□□ -1.83
SYNE3Q6ZMZ3 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.63□□□□□ -1.83
SYNE3Q6ZMZ3 Z85995.1-201ENST00000415547 335 ntBASIC3.63□□□□□ -1.83
SYNE3Q6ZMZ3 MTATP6P18-201ENST00000417994 673 ntBASIC3.63□□□□□ -1.83
SYNE3Q6ZMZ3 RAC1P6-201ENST00000423911 575 ntBASIC3.63□□□□□ -1.83
SYNE3Q6ZMZ3 AC012498.1-201ENST00000424037 437 ntBASIC3.63□□□□□ -1.83
SYNE3Q6ZMZ3 RPL7P46-201ENST00000425129 740 ntBASIC3.63□□□□□ -1.83
SYNE3Q6ZMZ3 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.63□□□□□ -1.83
SYNE3Q6ZMZ3 MTCO3P30-201ENST00000426425 670 ntBASIC3.63□□□□□ -1.83
SYNE3Q6ZMZ3 FCF1P1-201ENST00000432690 571 ntBASIC3.63□□□□□ -1.83
SYNE3Q6ZMZ3 RPS20P5-201ENST00000434808 360 ntBASIC3.63□□□□□ -1.83
SYNE3Q6ZMZ3 AC093899.1-201ENST00000457984 376 ntBASIC3.63□□□□□ -1.83
SYNE3Q6ZMZ3 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC3.63□□□□□ -1.83
SYNE3Q6ZMZ3 RPS20P22-201ENST00000473700 357 ntBASIC3.63□□□□□ -1.83
SYNE3Q6ZMZ3 RN7SL504P-201ENST00000494496 287 ntBASIC3.63□□□□□ -1.83
SYNE3Q6ZMZ3 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC3.63□□□□□ -1.83
SYNE3Q6ZMZ3 GMPSP1-201ENST00000514075 579 ntBASIC3.63□□□□□ -1.83
SYNE3Q6ZMZ3 RNU6-927P-201ENST00000516199 100 ntBASIC3.63□□□□□ -1.83
SYNE3Q6ZMZ3 SUB1P2-201ENST00000556401 297 ntBASIC3.63□□□□□ -1.83
SYNE3Q6ZMZ3 AL133393.1-201ENST00000603277 287 ntBASIC3.63□□□□□ -1.83
SYNE3Q6ZMZ3 AC012468.1-201ENST00000604888 430 ntBASIC3.63□□□□□ -1.83
SYNE3Q6ZMZ3 AP001330.5-201ENST00000607176 411 ntBASIC3.63□□□□□ -1.83
SYNE3Q6ZMZ3 AC092954.2-201ENST00000609103 430 ntBASIC3.63□□□□□ -1.83
SYNE3Q6ZMZ3 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.63□□□□□ -1.83
SYNE3Q6ZMZ3 AL158209.2-201ENST00000619266 216 ntBASIC3.63□□□□□ -1.83
SYNE3Q6ZMZ3 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC3.63□□□□□ -1.83
SYNE3Q6ZMZ3 LRRC77P-213ENST00000637727 880 ntBASIC3.63□□□□□ -1.83
SYNE3Q6ZMZ3 OR5H6-203ENST00000642105 978 ntBASIC3.63□□□□□ -1.83
SYNE3Q6ZMZ3 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
SYNE3Q6ZMZ3 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
SYNE3Q6ZMZ3 RNU6-50P-201ENST00000362356 103 ntBASIC3.62□□□□□ -1.83
SYNE3Q6ZMZ3 Y_RNA.367-201ENST00000365544 101 ntBASIC3.62□□□□□ -1.83
SYNE3Q6ZMZ3 RNU6-14P-201ENST00000384630 106 ntBASIC3.62□□□□□ -1.83
SYNE3Q6ZMZ3 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
SYNE3Q6ZMZ3 NDUFS5P1-201ENST00000405668 289 ntBASIC3.62□□□□□ -1.83
SYNE3Q6ZMZ3 RNA5SP129-201ENST00000410276 118 ntBASIC3.62□□□□□ -1.83
SYNE3Q6ZMZ3 RN7SKP140-201ENST00000411196 284 ntBASIC3.62□□□□□ -1.83
SYNE3Q6ZMZ3 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC3.62□□□□□ -1.83
SYNE3Q6ZMZ3 ISCA1P1-201ENST00000426679 387 ntBASIC3.62□□□□□ -1.83
SYNE3Q6ZMZ3 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC3.62□□□□□ -1.83
SYNE3Q6ZMZ3 AC002486.1-201ENST00000435098 391 ntBASIC3.62□□□□□ -1.83
SYNE3Q6ZMZ3 SSXP4-201ENST00000451349 245 ntBASIC3.62□□□□□ -1.83
SYNE3Q6ZMZ3 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC3.62□□□□□ -1.83
SYNE3Q6ZMZ3 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC3.62□□□□□ -1.83
SYNE3Q6ZMZ3 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.62□□□□□ -1.83
SYNE3Q6ZMZ3 snoU13.22-201ENST00000459428 104 ntBASIC3.62□□□□□ -1.83
SYNE3Q6ZMZ3 ARL4AP2-201ENST00000507378 601 ntBASIC3.62□□□□□ -1.83
SYNE3Q6ZMZ3 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC3.62□□□□□ -1.83
SYNE3Q6ZMZ3 RNA5SP380-201ENST00000517190 98 ntBASIC3.62□□□□□ -1.83
SYNE3Q6ZMZ3 HMGB1P41-201ENST00000520234 440 ntBASIC3.62□□□□□ -1.83
SYNE3Q6ZMZ3 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.62□□□□□ -1.83
SYNE3Q6ZMZ3 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC3.62□□□□□ -1.83
SYNE3Q6ZMZ3 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC3.62□□□□□ -1.83
SYNE3Q6ZMZ3 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.62□□□□□ -1.83
SYNE3Q6ZMZ3 AC055876.1-202ENST00000567053 138 ntBASIC3.62□□□□□ -1.83
SYNE3Q6ZMZ3 AC007684.1-201ENST00000609671 477 ntBASIC3.62□□□□□ -1.83
SYNE3Q6ZMZ3 CR381653.2-201ENST00000624041 768 ntBASIC3.62□□□□□ -1.83
SYNE3Q6ZMZ3 MIR6863-201ENST00000636112 90 ntBASIC3.62□□□□□ -1.83
SYNE3Q6ZMZ3 AC068137.3-201ENST00000639191 341 ntBASIC3.62□□□□□ -1.83
SYNE3Q6ZMZ3 AC073869.6-201ENST00000640656 341 ntBASIC3.62□□□□□ -1.83
SYNE3Q6ZMZ3 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.62□□□□□ -1.83
SYNE3Q6ZMZ3 AC008568.2-201ENST00000623862 2313 ntBASIC3.62□□□□□ -1.83
SYNE3Q6ZMZ3 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.62□□□□□ -1.83
SYNE3Q6ZMZ3 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC3.62□□□□□ -1.83
SYNE3Q6ZMZ3 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.62□□□□□ -1.83
SYNE3Q6ZMZ3 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
SYNE3Q6ZMZ3 OR4G2P-202ENST00000641004 1759 ntBASIC3.61□□□□□ -1.83
SYNE3Q6ZMZ3 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
SYNE3Q6ZMZ3 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 126.1 ms