Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC2.1□□□□□ -2.07
RFC3P40938 AC104763.2-201ENST00000604179 382 ntBASIC2.1□□□□□ -2.07
RFC3P40938 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.1□□□□□ -2.07
RFC3P40938 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC2.1□□□□□ -2.07
RFC3P40938 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.1□□□□□ -2.07
RFC3P40938 OR10AB1P-201ENST00000609613 938 ntBASIC2.1□□□□□ -2.07
RFC3P40938 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC2.1□□□□□ -2.07
RFC3P40938 AL449363.1-201ENST00000617815 186 ntBASIC2.1□□□□□ -2.07
RFC3P40938 AL138960.2-201ENST00000625145 535 ntBASIC2.1□□□□□ -2.07
RFC3P40938 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC2.1□□□□□ -2.07
RFC3P40938 ZNF720P1-201ENST00000562403 1939 ntBASIC2.1□□□□□ -2.07
RFC3P40938 PCF11-AS1-201ENST00000602322 1516 ntBASIC2.1□□□□□ -2.07
RFC3P40938 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC2.09□□□□□ -2.07
RFC3P40938 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
RFC3P40938 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
RFC3P40938 RNU6-853P-201ENST00000364306 107 ntBASIC2.09□□□□□ -2.07
RFC3P40938 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC2.09□□□□□ -2.07
RFC3P40938 MIR524-201ENST00000385242 87 ntBASIC2.09□□□□□ -2.07
RFC3P40938 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.09□□□□□ -2.07
RFC3P40938 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.09□□□□□ -2.07
RFC3P40938 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC2.09□□□□□ -2.07
RFC3P40938 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC2.09□□□□□ -2.07
RFC3P40938 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC2.09□□□□□ -2.07
RFC3P40938 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC2.09□□□□□ -2.07
RFC3P40938 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC2.09□□□□□ -2.07
RFC3P40938 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.09□□□□□ -2.07
RFC3P40938 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
RFC3P40938 PGBD4P3-201ENST00000440731 581 ntBASIC2.09□□□□□ -2.07
RFC3P40938 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.09□□□□□ -2.07
RFC3P40938 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC2.09□□□□□ -2.07
RFC3P40938 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC2.09□□□□□ -2.07
RFC3P40938 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.09□□□□□ -2.07
RFC3P40938 AC034222.1-201ENST00000494052 532 ntBASIC2.09□□□□□ -2.07
RFC3P40938 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC2.09□□□□□ -2.07
RFC3P40938 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.09□□□□□ -2.07
RFC3P40938 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC2.09□□□□□ -2.07
RFC3P40938 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC2.09□□□□□ -2.07
RFC3P40938 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC2.09□□□□□ -2.07
RFC3P40938 AC007151.1-201ENST00000572774 483 ntBASIC2.09□□□□□ -2.07
RFC3P40938 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC2.09□□□□□ -2.07
RFC3P40938 AL391813.1-201ENST00000603098 260 ntBASIC2.09□□□□□ -2.07
RFC3P40938 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
RFC3P40938 AC067747.1-201ENST00000608026 250 ntBASIC2.09□□□□□ -2.07
RFC3P40938 AL121652.1-201ENST00000608851 448 ntBASIC2.09□□□□□ -2.07
RFC3P40938 AC018645.2-201ENST00000609151 472 ntBASIC2.09□□□□□ -2.07
RFC3P40938 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC2.09□□□□□ -2.07
RFC3P40938 AL133445.2-201ENST00000611191 527 ntBASIC2.09□□□□□ -2.07
RFC3P40938 AC025594.3-201ENST00000613068 790 ntBASIC2.09□□□□□ -2.07
RFC3P40938 AC009159.1-201ENST00000618386 642 ntBASIC2.09□□□□□ -2.07
RFC3P40938 AP000676.3-201ENST00000623299 569 ntBASIC2.09□□□□□ -2.07
RFC3P40938 AC004808.1-201ENST00000627671 721 ntBASIC2.09□□□□□ -2.07
RFC3P40938 PCMTD1P7-201ENST00000634506 357 ntBASIC2.09□□□□□ -2.07
RFC3P40938 MTND5P29-201ENST00000458676 1807 ntBASIC2.09□□□□□ -2.08
RFC3P40938 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC2.09□□□□□ -2.08
RFC3P40938 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.08□□□□□ -2.08
RFC3P40938 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
RFC3P40938 Y_RNA.192-201ENST00000363977 102 ntBASIC2.08□□□□□ -2.08
RFC3P40938 RNU1-52P-201ENST00000384190 164 ntBASIC2.08□□□□□ -2.08
RFC3P40938 RNU6-253P-201ENST00000384730 105 ntBASIC2.08□□□□□ -2.08
RFC3P40938 RPL26P27-201ENST00000414397 437 ntBASIC2.08□□□□□ -2.08
RFC3P40938 RPS3AP37-201ENST00000419176 745 ntBASIC2.08□□□□□ -2.08
RFC3P40938 DPH3P2-201ENST00000422618 250 ntBASIC2.08□□□□□ -2.08
RFC3P40938 BX276092.3-201ENST00000424182 230 ntBASIC2.08□□□□□ -2.08
RFC3P40938 AC244035.1-201ENST00000430042 390 ntBASIC2.08□□□□□ -2.08
RFC3P40938 AC010153.1-201ENST00000432862 727 ntBASIC2.08□□□□□ -2.08
RFC3P40938 RPS25P9-201ENST00000435591 252 ntBASIC2.08□□□□□ -2.08
RFC3P40938 EEF1A1P39-201ENST00000440791 250 ntBASIC2.08□□□□□ -2.08
RFC3P40938 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC2.08□□□□□ -2.08
RFC3P40938 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC2.08□□□□□ -2.08
RFC3P40938 AP000542.1-201ENST00000448473 371 ntBASIC2.08□□□□□ -2.08
RFC3P40938 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC2.08□□□□□ -2.08
RFC3P40938 TRBV1-201ENST00000476502 284 ntBASIC2.08□□□□□ -2.08
RFC3P40938 AC023141.11-201ENST00000508864 202 ntBASIC2.08□□□□□ -2.08
RFC3P40938 LTV1P1-201ENST00000510683 1237 ntBASIC2.08□□□□□ -2.08
RFC3P40938 AC116353.3-201ENST00000511215 249 ntBASIC2.08□□□□□ -2.08
RFC3P40938 RNA5SP216-201ENST00000516111 123 ntBASIC2.08□□□□□ -2.08
RFC3P40938 RNU6-390P-201ENST00000516259 103 ntBASIC2.08□□□□□ -2.08
RFC3P40938 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC2.08□□□□□ -2.08
RFC3P40938 BTF3P12-201ENST00000519620 469 ntBASIC2.08□□□□□ -2.08
RFC3P40938 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.08□□□□□ -2.08
RFC3P40938 YWHAZP1-201ENST00000556286 722 ntBASIC2.08□□□□□ -2.08
RFC3P40938 AL133153.1-201ENST00000557756 303 ntBASIC2.08□□□□□ -2.08
RFC3P40938 AP001269.3-201ENST00000588718 329 ntBASIC2.08□□□□□ -2.08
RFC3P40938 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
RFC3P40938 CKAP2P1-201ENST00000555477 2049 ntBASIC2.08□□□□□ -2.08
RFC3P40938 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
RFC3P40938 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
RFC3P40938 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.07□□□□□ -2.08
RFC3P40938 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
RFC3P40938 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.07□□□□□ -2.08
RFC3P40938 RNU6-1167P-201ENST00000363227 94 ntBASIC2.07□□□□□ -2.08
RFC3P40938 Y_RNA.465-201ENST00000384293 102 ntBASIC2.07□□□□□ -2.08
RFC3P40938 MIR221-201ENST00000385135 110 ntBASIC2.07□□□□□ -2.08
RFC3P40938 MIR320C1-201ENST00000408566 88 ntBASIC2.07□□□□□ -2.08
RFC3P40938 RNU6-920P-201ENST00000410926 92 ntBASIC2.07□□□□□ -2.08
RFC3P40938 MTCO1P17-201ENST00000411522 491 ntBASIC2.07□□□□□ -2.08
RFC3P40938 HMGB3P2-201ENST00000411913 584 ntBASIC2.07□□□□□ -2.08
RFC3P40938 RPL21P24-201ENST00000413752 448 ntBASIC2.07□□□□□ -2.08
RFC3P40938 HMGN2P38-201ENST00000423806 265 ntBASIC2.07□□□□□ -2.08
RFC3P40938 HMGB3P12-201ENST00000438745 556 ntBASIC2.07□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 117.4 ms