Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 AL354950.2-201ENST00000617939 290 ntBASIC3.02□□□□□ -1.93
PRKNO60260 SNORD39.4-201ENST00000620099 78 ntBASIC3.02□□□□□ -1.93
PRKNO60260 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC3.02□□□□□ -1.93
PRKNO60260 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
PRKNO60260 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.02□□□□□ -1.93
PRKNO60260 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
PRKNO60260 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
PRKNO60260 AC091152.2-201ENST00000591628 2569 ntBASIC3.02□□□□□ -1.93
PRKNO60260 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.01□□□□□ -1.93
PRKNO60260 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
PRKNO60260 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
PRKNO60260 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
PRKNO60260 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
PRKNO60260 RNA5SP295-201ENST00000362655 121 ntBASIC3.01□□□□□ -1.93
PRKNO60260 RNU5A-1-201ENST00000362698 116 ntBASIC3.01□□□□□ -1.93
PRKNO60260 RNU4-48P-201ENST00000365559 182 ntBASIC3.01□□□□□ -1.93
PRKNO60260 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
PRKNO60260 SNORA69-201ENST00000383895 132 ntBASIC3.01□□□□□ -1.93
PRKNO60260 Y_RNA.390-201ENST00000383932 102 ntBASIC3.01□□□□□ -1.93
PRKNO60260 MIR454-201ENST00000390180 115 ntBASIC3.01□□□□□ -1.93
PRKNO60260 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
PRKNO60260 NDUFS5P1-201ENST00000405668 289 ntBASIC3.01□□□□□ -1.93
PRKNO60260 AC022028.1-201ENST00000412054 408 ntBASIC3.01□□□□□ -1.93
PRKNO60260 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
PRKNO60260 OR51A5P-201ENST00000415429 942 ntBASIC3.01□□□□□ -1.93
PRKNO60260 RPL21P66-201ENST00000426566 466 ntBASIC3.01□□□□□ -1.93
PRKNO60260 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC3.01□□□□□ -1.93
PRKNO60260 GTF2IP20-201ENST00000431663 360 ntBASIC3.01□□□□□ -1.93
PRKNO60260 SETP5-201ENST00000437270 562 ntBASIC3.01□□□□□ -1.93
PRKNO60260 HMGB3P11-201ENST00000440127 604 ntBASIC3.01□□□□□ -1.93
PRKNO60260 MTATP6P23-201ENST00000440153 476 ntBASIC3.01□□□□□ -1.93
PRKNO60260 AC016691.1-201ENST00000441321 413 ntBASIC3.01□□□□□ -1.93
PRKNO60260 DDX3P2-201ENST00000446138 111 ntBASIC3.01□□□□□ -1.93
PRKNO60260 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
PRKNO60260 DPPA3P1-201ENST00000448050 469 ntBASIC3.01□□□□□ -1.93
PRKNO60260 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC3.01□□□□□ -1.93
PRKNO60260 RPS29P15-201ENST00000458329 171 ntBASIC3.01□□□□□ -1.93
PRKNO60260 MRPS17P3-201ENST00000465453 385 ntBASIC3.01□□□□□ -1.93
PRKNO60260 HSPE1P6-201ENST00000479457 291 ntBASIC3.01□□□□□ -1.93
PRKNO60260 PRDX4P1-201ENST00000507189 574 ntBASIC3.01□□□□□ -1.93
PRKNO60260 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.01□□□□□ -1.93
PRKNO60260 SNORA40.12-201ENST00000516329 111 ntBASIC3.01□□□□□ -1.93
PRKNO60260 SNORA70.24-201ENST00000517233 118 ntBASIC3.01□□□□□ -1.93
PRKNO60260 RN7SKP57-201ENST00000517248 293 ntBASIC3.01□□□□□ -1.93
PRKNO60260 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.01□□□□□ -1.93
PRKNO60260 OR5AL2P-201ENST00000532185 920 ntBASIC3.01□□□□□ -1.93
PRKNO60260 MED28P6-201ENST00000558776 231 ntBASIC3.01□□□□□ -1.93
PRKNO60260 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.01□□□□□ -1.93
PRKNO60260 MIR2682-201ENST00000580305 110 ntBASIC3.01□□□□□ -1.93
PRKNO60260 MIR4425-201ENST00000580572 84 ntBASIC3.01□□□□□ -1.93
PRKNO60260 AP001029.3-201ENST00000588063 596 ntBASIC3.01□□□□□ -1.93
PRKNO60260 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3.01□□□□□ -1.93
PRKNO60260 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.01□□□□□ -1.93
PRKNO60260 AL670379.6-201ENST00000603753 252 ntBASIC3.01□□□□□ -1.93
PRKNO60260 AL670379.11-201ENST00000604059 253 ntBASIC3.01□□□□□ -1.93
PRKNO60260 AC008162.1-201ENST00000604718 254 ntBASIC3.01□□□□□ -1.93
PRKNO60260 AL670379.1-201ENST00000604752 252 ntBASIC3.01□□□□□ -1.93
PRKNO60260 AL670379.5-201ENST00000605253 252 ntBASIC3.01□□□□□ -1.93
PRKNO60260 AL670379.12-201ENST00000605291 253 ntBASIC3.01□□□□□ -1.93
PRKNO60260 AL670379.8-201ENST00000605353 252 ntBASIC3.01□□□□□ -1.93
PRKNO60260 AC073657.2-201ENST00000605661 303 ntBASIC3.01□□□□□ -1.93
PRKNO60260 AL670379.7-201ENST00000605823 252 ntBASIC3.01□□□□□ -1.93
PRKNO60260 RNVU1-4-201ENST00000612985 164 ntBASIC3.01□□□□□ -1.93
PRKNO60260 AC022306.2-201ENST00000617563 647 ntBASIC3.01□□□□□ -1.93
PRKNO60260 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.01□□□□□ -1.93
PRKNO60260 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.01□□□□□ -1.93
PRKNO60260 XIST_intron.1-201ENST00000619444 68 ntBASIC3.01□□□□□ -1.93
PRKNO60260 YWHAEP7-203ENST00000622054 312 ntBASIC3.01□□□□□ -1.93
PRKNO60260 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.01□□□□□ -1.93
PRKNO60260 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
PRKNO60260 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.01□□□□□ -1.93
PRKNO60260 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
PRKNO60260 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
PRKNO60260 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.01□□□□□ -1.93
PRKNO60260 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
PRKNO60260 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3□□□□□ -1.93
PRKNO60260 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC3□□□□□ -1.93
PRKNO60260 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3□□□□□ -1.93
PRKNO60260 RNU6-960P-201ENST00000364056 120 ntBASIC3□□□□□ -1.93
PRKNO60260 SNORA38.1-201ENST00000364172 131 ntBASIC3□□□□□ -1.93
PRKNO60260 RNA5-8SP4-201ENST00000365096 150 ntBASIC3□□□□□ -1.93
PRKNO60260 SMIM11P1-201ENST00000369586 178 ntBASIC3□□□□□ -1.93
PRKNO60260 SNORA36C-201ENST00000384289 132 ntBASIC3□□□□□ -1.93
PRKNO60260 RNU6-606P-201ENST00000384721 111 ntBASIC3□□□□□ -1.93
PRKNO60260 MIR491-201ENST00000384877 84 ntBASIC3□□□□□ -1.93
PRKNO60260 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3□□□□□ -1.93
PRKNO60260 EI24P2-201ENST00000397776 1076 ntBASIC3□□□□□ -1.93
PRKNO60260 Y_RNA.604-201ENST00000410574 102 ntBASIC3□□□□□ -1.93
PRKNO60260 UBE2Q2P12-201ENST00000414573 204 ntBASIC3□□□□□ -1.93
PRKNO60260 AC018630.2-202ENST00000422992 927 ntBASIC3□□□□□ -1.93
PRKNO60260 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3□□□□□ -1.93
PRKNO60260 NEK4P1-201ENST00000433383 879 ntBASIC3□□□□□ -1.93
PRKNO60260 HMGB1P31-201ENST00000437242 427 ntBASIC3□□□□□ -1.93
PRKNO60260 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC3□□□□□ -1.93
PRKNO60260 RPS3AP12-201ENST00000443616 753 ntBASIC3□□□□□ -1.93
PRKNO60260 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC3□□□□□ -1.93
PRKNO60260 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3□□□□□ -1.93
PRKNO60260 CACYBPP2-201ENST00000453625 678 ntBASIC3□□□□□ -1.93
PRKNO60260 AL356010.1-201ENST00000456364 102 ntBASIC3□□□□□ -1.93
PRKNO60260 RNU6-261P-201ENST00000459506 102 ntBASIC3□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 131.8 ms