Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
ACTN4O43707 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
ACTN4O43707 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC5.7□□□□□ -1.5
ACTN4O43707 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
ACTN4O43707 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
ACTN4O43707 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
ACTN4O43707 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
ACTN4O43707 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
ACTN4O43707 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC5.69□□□□□ -1.5
ACTN4O43707 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
ACTN4O43707 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC5.69□□□□□ -1.5
ACTN4O43707 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
ACTN4O43707 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
ACTN4O43707 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
ACTN4O43707 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
ACTN4O43707 AL672167.1-204ENST00000641875 3017 ntBASIC5.69□□□□□ -1.5
ACTN4O43707 RNU5A-1-201ENST00000362698 116 ntBASIC5.69□□□□□ -1.5
ACTN4O43707 RNU6-1167P-201ENST00000363227 94 ntBASIC5.69□□□□□ -1.5
ACTN4O43707 RN7SKP160-201ENST00000363804 340 ntBASIC5.69□□□□□ -1.5
ACTN4O43707 Y_RNA.238-201ENST00000364441 102 ntBASIC5.69□□□□□ -1.5
ACTN4O43707 Y_RNA.412-201ENST00000384001 104 ntBASIC5.69□□□□□ -1.5
ACTN4O43707 RNU1-139P-201ENST00000391307 165 ntBASIC5.69□□□□□ -1.5
ACTN4O43707 SNORA77-201ENST00000408716 125 ntBASIC5.69□□□□□ -1.5
ACTN4O43707 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC5.69□□□□□ -1.5
ACTN4O43707 AC099336.2-201ENST00000422457 254 ntBASIC5.69□□□□□ -1.5
ACTN4O43707 CHEK2P5-201ENST00000423877 246 ntBASIC5.69□□□□□ -1.5
ACTN4O43707 WARS2P1-201ENST00000429678 537 ntBASIC5.69□□□□□ -1.5
ACTN4O43707 AL627311.1-201ENST00000431514 115 ntBASIC5.69□□□□□ -1.5
ACTN4O43707 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC5.69□□□□□ -1.5
ACTN4O43707 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC5.69□□□□□ -1.5
ACTN4O43707 AL450023.3-201ENST00000440592 271 ntBASIC5.69□□□□□ -1.5
ACTN4O43707 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC5.69□□□□□ -1.5
ACTN4O43707 IFNA11P-201ENST00000446352 526 ntBASIC5.69□□□□□ -1.5
ACTN4O43707 AC099560.2-201ENST00000457554 255 ntBASIC5.69□□□□□ -1.5
ACTN4O43707 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC5.69□□□□□ -1.5
ACTN4O43707 RN7SL443P-201ENST00000464331 290 ntBASIC5.69□□□□□ -1.5
ACTN4O43707 AC009127.1-201ENST00000467090 155 ntBASIC5.69□□□□□ -1.5
ACTN4O43707 AC005532.2-201ENST00000467154 373 ntBASIC5.69□□□□□ -1.5
ACTN4O43707 AP000870.1-201ENST00000472927 406 ntBASIC5.69□□□□□ -1.5
ACTN4O43707 AC022795.1-201ENST00000473808 480 ntBASIC5.69□□□□□ -1.5
ACTN4O43707 RPL23AP75-201ENST00000491601 451 ntBASIC5.69□□□□□ -1.5
ACTN4O43707 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC5.69□□□□□ -1.5
ACTN4O43707 SNORA40.9-201ENST00000515895 93 ntBASIC5.69□□□□□ -1.5
ACTN4O43707 RNU6-1114P-201ENST00000516022 107 ntBASIC5.69□□□□□ -1.5
ACTN4O43707 UTP23-205ENST00000520733 369 ntTSL 3 BASIC5.69□□□□□ -1.5
ACTN4O43707 RPL23AP53-201ENST00000521854 457 ntBASIC5.69□□□□□ -1.5
ACTN4O43707 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC5.69□□□□□ -1.5
ACTN4O43707 RMST_6.1-201ENST00000611980 203 ntBASIC5.69□□□□□ -1.5
ACTN4O43707 AL512624.1-201ENST00000613638 469 ntBASIC5.69□□□□□ -1.5
ACTN4O43707 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
ACTN4O43707 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.69□□□□□ -1.5
ACTN4O43707 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC5.69□□□□□ -1.5
ACTN4O43707 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC5.69□□□□□ -1.5
ACTN4O43707 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
ACTN4O43707 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
ACTN4O43707 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC5.69□□□□□ -1.5
ACTN4O43707 AC110774.1-201ENST00000623567 2018 ntBASIC5.69□□□□□ -1.5
ACTN4O43707 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
ACTN4O43707 AC104260.2-201ENST00000623551 3497 ntBASIC5.68□□□□□ -1.5
ACTN4O43707 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC5.68□□□□□ -1.5
ACTN4O43707 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
ACTN4O43707 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC5.68□□□□□ -1.5
ACTN4O43707 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
ACTN4O43707 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
ACTN4O43707 RNU6-1249P-201ENST00000363237 111 ntBASIC5.68□□□□□ -1.5
ACTN4O43707 Y_RNA.230-201ENST00000364348 109 ntBASIC5.68□□□□□ -1.5
ACTN4O43707 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC5.68□□□□□ -1.5
ACTN4O43707 RNU6-211P-201ENST00000384047 107 ntBASIC5.68□□□□□ -1.5
ACTN4O43707 RNU6-968P-201ENST00000384076 107 ntBASIC5.68□□□□□ -1.5
ACTN4O43707 SNORA36C-201ENST00000384289 132 ntBASIC5.68□□□□□ -1.5
ACTN4O43707 MIR32-201ENST00000384965 70 ntBASIC5.68□□□□□ -1.5
ACTN4O43707 RNU2-2P-201ENST00000410396 191 ntBASIC5.68□□□□□ -1.5
ACTN4O43707 RPS29P9-201ENST00000440360 171 ntBASIC5.68□□□□□ -1.5
ACTN4O43707 AL353705.4-201ENST00000449661 238 ntBASIC5.68□□□□□ -1.5
ACTN4O43707 AL691482.1-201ENST00000453255 87 ntBASIC5.68□□□□□ -1.5
ACTN4O43707 RPL23AP3-201ENST00000453844 468 ntBASIC5.68□□□□□ -1.5
ACTN4O43707 RPL10P17-201ENST00000453852 316 ntBASIC5.68□□□□□ -1.5
ACTN4O43707 AC023424.1-201ENST00000496058 459 ntBASIC5.68□□□□□ -1.5
ACTN4O43707 ENSA-210ENST00000503241 574 ntTSL 3 BASIC5.68□□□□□ -1.5
ACTN4O43707 AC093840.1-201ENST00000511599 336 ntBASIC5.68□□□□□ -1.5
ACTN4O43707 Y_RNA.686-201ENST00000516548 134 ntBASIC5.68□□□□□ -1.5
ACTN4O43707 RN7SKP49-201ENST00000516675 260 ntBASIC5.68□□□□□ -1.5
ACTN4O43707 BNIP3P5-201ENST00000562290 498 ntBASIC5.68□□□□□ -1.5
ACTN4O43707 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC5.68□□□□□ -1.5
ACTN4O43707 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC5.68□□□□□ -1.5
ACTN4O43707 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC5.68□□□□□ -1.5
ACTN4O43707 KLKP1-201ENST00000595979 403 ntBASIC5.68□□□□□ -1.5
ACTN4O43707 RNU2-4P-201ENST00000606190 192 ntBASIC5.68□□□□□ -1.5
ACTN4O43707 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC5.68□□□□□ -1.5
ACTN4O43707 U2.15-201ENST00000611544 191 ntBASIC5.68□□□□□ -1.5
ACTN4O43707 U2.16-201ENST00000613119 191 ntBASIC5.68□□□□□ -1.5
ACTN4O43707 U2.12-201ENST00000613778 191 ntBASIC5.68□□□□□ -1.5
ACTN4O43707 U2.9-201ENST00000615427 191 ntBASIC5.68□□□□□ -1.5
ACTN4O43707 U2.11-201ENST00000616345 191 ntBASIC5.68□□□□□ -1.5
ACTN4O43707 U2.2-201ENST00000616535 191 ntBASIC5.68□□□□□ -1.5
ACTN4O43707 U2.3-201ENST00000617785 191 ntBASIC5.68□□□□□ -1.5
ACTN4O43707 U2.19-201ENST00000618602 191 ntBASIC5.68□□□□□ -1.5
ACTN4O43707 RNU2-1-201ENST00000618664 191 ntBASIC5.68□□□□□ -1.5
ACTN4O43707 U2.6-201ENST00000619225 191 ntBASIC5.68□□□□□ -1.5
ACTN4O43707 U2.5-201ENST00000619465 191 ntBASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 120.4 ms