Protein–RNA interactions for Protein: Q9Y625

GPC6, Glypican-6, humanhuman

Predicted RBP Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6Q9Y625 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.62
GPC6Q9Y625 AC233981.2-201ENST00000611524 1614 ntBASIC4.9□□□□□ -1.62
GPC6Q9Y625 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
GPC6Q9Y625 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC4.9□□□□□ -1.62
GPC6Q9Y625 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC4.9□□□□□ -1.62
GPC6Q9Y625 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
GPC6Q9Y625 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
GPC6Q9Y625 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
GPC6Q9Y625 RNU6-1301P-201ENST00000362724 104 ntBASIC4.9□□□□□ -1.63
GPC6Q9Y625 RNU6-336P-201ENST00000364891 107 ntBASIC4.9□□□□□ -1.63
GPC6Q9Y625 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
GPC6Q9Y625 RNU6-843P-201ENST00000384454 104 ntBASIC4.9□□□□□ -1.63
GPC6Q9Y625 BTF3L4P2-201ENST00000392798 346 ntBASIC4.9□□□□□ -1.63
GPC6Q9Y625 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
GPC6Q9Y625 AC009804.1-201ENST00000400949 179 ntBASIC4.9□□□□□ -1.63
GPC6Q9Y625 RNU4-30P-201ENST00000410245 143 ntBASIC4.9□□□□□ -1.63
GPC6Q9Y625 AC007738.1-201ENST00000413892 348 ntBASIC4.9□□□□□ -1.63
GPC6Q9Y625 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC4.9□□□□□ -1.63
GPC6Q9Y625 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.9□□□□□ -1.63
GPC6Q9Y625 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC4.9□□□□□ -1.63
GPC6Q9Y625 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC4.9□□□□□ -1.63
GPC6Q9Y625 AC009963.2-201ENST00000453431 138 ntBASIC4.9□□□□□ -1.63
GPC6Q9Y625 RPL7AP28-201ENST00000464513 571 ntBASIC4.9□□□□□ -1.63
GPC6Q9Y625 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.9□□□□□ -1.63
GPC6Q9Y625 RPL21P13-201ENST00000488305 481 ntBASIC4.9□□□□□ -1.63
GPC6Q9Y625 AC139453.3-201ENST00000493276 369 ntBASIC4.9□□□□□ -1.63
GPC6Q9Y625 BX510359.5-201ENST00000515651 304 ntBASIC4.9□□□□□ -1.63
GPC6Q9Y625 SNORD116-26-201ENST00000516006 96 ntBASIC4.9□□□□□ -1.63
GPC6Q9Y625 RNA5SP362-201ENST00000516048 118 ntBASIC4.9□□□□□ -1.63
GPC6Q9Y625 RAB9BP1-201ENST00000519581 626 ntBASIC4.9□□□□□ -1.63
GPC6Q9Y625 AP006245.1-201ENST00000522549 120 ntBASIC4.9□□□□□ -1.63
GPC6Q9Y625 HMGB1P40-201ENST00000525121 540 ntBASIC4.9□□□□□ -1.63
GPC6Q9Y625 AC234771.5-201ENST00000600161 514 ntBASIC4.9□□□□□ -1.63
GPC6Q9Y625 LINC00901.1-201ENST00000617252 152 ntBASIC4.9□□□□□ -1.63
GPC6Q9Y625 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.9□□□□□ -1.63
GPC6Q9Y625 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
GPC6Q9Y625 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.63
GPC6Q9Y625 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
GPC6Q9Y625 SDAD1P2-201ENST00000441308 2028 ntBASIC4.9□□□□□ -1.63
GPC6Q9Y625 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.9□□□□□ -1.63
GPC6Q9Y625 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
GPC6Q9Y625 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
GPC6Q9Y625 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.9□□□□□ -1.63
GPC6Q9Y625 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC4.89□□□□□ -1.63
GPC6Q9Y625 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
GPC6Q9Y625 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC4.89□□□□□ -1.63
GPC6Q9Y625 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.89□□□□□ -1.63
GPC6Q9Y625 AC009541.1-201ENST00000438279 2662 ntBASIC4.89□□□□□ -1.63
GPC6Q9Y625 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
GPC6Q9Y625 RNA5SP335-201ENST00000363817 110 ntBASIC4.89□□□□□ -1.63
GPC6Q9Y625 RNU6-740P-201ENST00000364734 105 ntBASIC4.89□□□□□ -1.63
GPC6Q9Y625 RNA5SP235-201ENST00000365411 114 ntBASIC4.89□□□□□ -1.63
GPC6Q9Y625 UBA52P6-201ENST00000399822 382 ntBASIC4.89□□□□□ -1.63
GPC6Q9Y625 HSPA8P15-201ENST00000401676 786 ntBASIC4.89□□□□□ -1.63
GPC6Q9Y625 RNU6ATAC18P-201ENST00000408413 101 ntBASIC4.89□□□□□ -1.63
GPC6Q9Y625 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.89□□□□□ -1.63
GPC6Q9Y625 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.89□□□□□ -1.63
GPC6Q9Y625 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4.89□□□□□ -1.63
GPC6Q9Y625 PTMAP3-201ENST00000447474 330 ntBASIC4.89□□□□□ -1.63
GPC6Q9Y625 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC4.89□□□□□ -1.63
GPC6Q9Y625 FABP5P15-201ENST00000453566 214 ntBASIC4.89□□□□□ -1.63
GPC6Q9Y625 snoU13.30-201ENST00000458951 104 ntBASIC4.89□□□□□ -1.63
GPC6Q9Y625 AC006427.1-201ENST00000514359 712 ntBASIC4.89□□□□□ -1.63
GPC6Q9Y625 MRPS36P4-201ENST00000534436 298 ntBASIC4.89□□□□□ -1.63
GPC6Q9Y625 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC4.89□□□□□ -1.63
GPC6Q9Y625 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC4.89□□□□□ -1.63
GPC6Q9Y625 RN7SL708P-201ENST00000580952 299 ntBASIC4.89□□□□□ -1.63
GPC6Q9Y625 AC060766.3-201ENST00000591442 263 ntBASIC4.89□□□□□ -1.63
GPC6Q9Y625 MZT1P2-201ENST00000604387 248 ntBASIC4.89□□□□□ -1.63
GPC6Q9Y625 AC005046.1-201ENST00000608515 625 ntBASIC4.89□□□□□ -1.63
GPC6Q9Y625 MIR6768-201ENST00000610734 72 ntBASIC4.89□□□□□ -1.63
GPC6Q9Y625 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.89□□□□□ -1.63
GPC6Q9Y625 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
GPC6Q9Y625 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
GPC6Q9Y625 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC4.89□□□□□ -1.63
GPC6Q9Y625 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.89□□□□□ -1.63
GPC6Q9Y625 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
GPC6Q9Y625 AC090971.4-201ENST00000560291 1800 ntBASIC4.88□□□□□ -1.63
GPC6Q9Y625 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC4.88□□□□□ -1.63
GPC6Q9Y625 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
GPC6Q9Y625 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
GPC6Q9Y625 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC4.88□□□□□ -1.63
GPC6Q9Y625 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
GPC6Q9Y625 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
GPC6Q9Y625 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
GPC6Q9Y625 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
GPC6Q9Y625 Y_RNA.292-201ENST00000364904 97 ntBASIC4.88□□□□□ -1.63
GPC6Q9Y625 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
GPC6Q9Y625 Y_RNA.590-201ENST00000410140 107 ntBASIC4.88□□□□□ -1.63
GPC6Q9Y625 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC4.88□□□□□ -1.63
GPC6Q9Y625 NUTF2P3-201ENST00000448540 384 ntBASIC4.88□□□□□ -1.63
GPC6Q9Y625 PPIAP20-201ENST00000449839 135 ntBASIC4.88□□□□□ -1.63
GPC6Q9Y625 AC091021.1-201ENST00000468051 388 ntBASIC4.88□□□□□ -1.63
GPC6Q9Y625 AL160314.1-201ENST00000490836 438 ntBASIC4.88□□□□□ -1.63
GPC6Q9Y625 Y_RNA.662-201ENST00000516028 97 ntBASIC4.88□□□□□ -1.63
GPC6Q9Y625 RNU6-572P-201ENST00000516724 80 ntBASIC4.88□□□□□ -1.63
GPC6Q9Y625 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC4.88□□□□□ -1.63
GPC6Q9Y625 AL162424.1-201ENST00000602325 221 ntBASIC4.88□□□□□ -1.63
GPC6Q9Y625 AL645944.1-201ENST00000603857 493 ntBASIC4.88□□□□□ -1.63
GPC6Q9Y625 AC104465.1-201ENST00000611365 139 ntBASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 112 ms