Protein–RNA interactions for Protein: Q9HA90

EFCC1, EF-hand and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCC1Q9HA90 CEACAMP1-201ENST00000434624 1035 ntBASIC5.34□□□□□ -1.55
EFCC1Q9HA90 AL162389.1-201ENST00000449233 177 ntBASIC5.34□□□□□ -1.55
EFCC1Q9HA90 AC069499.1-201ENST00000489433 509 ntBASIC5.34□□□□□ -1.55
EFCC1Q9HA90 AC073073.1-201ENST00000493920 463 ntBASIC5.34□□□□□ -1.55
EFCC1Q9HA90 SNORA40.14-201ENST00000516543 86 ntBASIC5.34□□□□□ -1.55
EFCC1Q9HA90 AC100870.1-201ENST00000522035 505 ntBASIC5.34□□□□□ -1.55
EFCC1Q9HA90 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC5.34□□□□□ -1.55
EFCC1Q9HA90 MIR4273-201ENST00000582824 84 ntBASIC5.34□□□□□ -1.55
EFCC1Q9HA90 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC5.34□□□□□ -1.55
EFCC1Q9HA90 RNU6-85P-201ENST00000605989 107 ntBASIC5.34□□□□□ -1.55
EFCC1Q9HA90 DDX10P1-201ENST00000448545 1933 ntBASIC5.34□□□□□ -1.55
EFCC1Q9HA90 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC5.34□□□□□ -1.56
EFCC1Q9HA90 AC093535.2-201ENST00000624769 2326 ntBASIC5.34□□□□□ -1.56
EFCC1Q9HA90 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC5.33□□□□□ -1.56
EFCC1Q9HA90 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
EFCC1Q9HA90 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC5.33□□□□□ -1.56
EFCC1Q9HA90 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
EFCC1Q9HA90 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
EFCC1Q9HA90 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
EFCC1Q9HA90 Y_RNA.150-201ENST00000363562 102 ntBASIC5.33□□□□□ -1.56
EFCC1Q9HA90 RNU6-770P-201ENST00000363929 105 ntBASIC5.33□□□□□ -1.56
EFCC1Q9HA90 RNU6-200P-201ENST00000364743 107 ntBASIC5.33□□□□□ -1.56
EFCC1Q9HA90 RNA5SP366-201ENST00000365454 123 ntBASIC5.33□□□□□ -1.56
EFCC1Q9HA90 MTCO2P33-201ENST00000402100 465 ntBASIC5.33□□□□□ -1.56
EFCC1Q9HA90 AC092447.6-201ENST00000414578 210 ntBASIC5.33□□□□□ -1.56
EFCC1Q9HA90 AL137014.1-201ENST00000420490 1226 ntBASIC5.33□□□□□ -1.56
EFCC1Q9HA90 AC099677.1-201ENST00000420575 175 ntBASIC5.33□□□□□ -1.56
EFCC1Q9HA90 AL590135.1-201ENST00000422215 156 ntBASIC5.33□□□□□ -1.56
EFCC1Q9HA90 RPL30P3-201ENST00000424262 333 ntBASIC5.33□□□□□ -1.56
EFCC1Q9HA90 UBE2V1P4-201ENST00000425374 344 ntBASIC5.33□□□□□ -1.56
EFCC1Q9HA90 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC5.33□□□□□ -1.56
EFCC1Q9HA90 AL645568.3-201ENST00000433683 316 ntBASIC5.33□□□□□ -1.56
EFCC1Q9HA90 RPL12P46-201ENST00000436610 195 ntBASIC5.33□□□□□ -1.56
EFCC1Q9HA90 RPS3AP46-201ENST00000448352 682 ntBASIC5.33□□□□□ -1.56
EFCC1Q9HA90 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC5.33□□□□□ -1.56
EFCC1Q9HA90 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC5.33□□□□□ -1.56
EFCC1Q9HA90 RN7SL98P-201ENST00000462271 300 ntBASIC5.33□□□□□ -1.56
EFCC1Q9HA90 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC5.33□□□□□ -1.56
EFCC1Q9HA90 AC007991.1-201ENST00000522680 631 ntBASIC5.33□□□□□ -1.56
EFCC1Q9HA90 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC5.33□□□□□ -1.56
EFCC1Q9HA90 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC5.33□□□□□ -1.56
EFCC1Q9HA90 AC012433.1-201ENST00000588916 398 ntBASIC5.33□□□□□ -1.56
EFCC1Q9HA90 AC073410.2-201ENST00000603240 332 ntBASIC5.33□□□□□ -1.56
EFCC1Q9HA90 AC010201.1-201ENST00000605051 540 ntBASIC5.33□□□□□ -1.56
EFCC1Q9HA90 AL034351.1-201ENST00000605288 668 ntBASIC5.33□□□□□ -1.56
EFCC1Q9HA90 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC5.33□□□□□ -1.56
EFCC1Q9HA90 MIR1244-1-201ENST00000612829 85 ntBASIC5.33□□□□□ -1.56
EFCC1Q9HA90 AL138825.1-201ENST00000618587 192 ntBASIC5.33□□□□□ -1.56
EFCC1Q9HA90 MIR1244-3-201ENST00000635744 85 ntBASIC5.33□□□□□ -1.56
EFCC1Q9HA90 MIR1244-2-201ENST00000636449 85 ntBASIC5.33□□□□□ -1.56
EFCC1Q9HA90 MIR1244-4-202ENST00000636813 85 ntBASIC5.33□□□□□ -1.56
EFCC1Q9HA90 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
EFCC1Q9HA90 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC5.33□□□□□ -1.56
EFCC1Q9HA90 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
EFCC1Q9HA90 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC5.33□□□□□ -1.56
EFCC1Q9HA90 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
EFCC1Q9HA90 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
EFCC1Q9HA90 SUPT16HP1-201ENST00000537175 3133 ntBASIC5.32□□□□□ -1.56
EFCC1Q9HA90 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC5.32□□□□□ -1.56
EFCC1Q9HA90 AC092435.4-201ENST00000623012 4159 ntBASIC5.32□□□□□ -1.56
EFCC1Q9HA90 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
EFCC1Q9HA90 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
EFCC1Q9HA90 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC5.32□□□□□ -1.56
EFCC1Q9HA90 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
EFCC1Q9HA90 Y_RNA.333-201ENST00000365274 102 ntBASIC5.32□□□□□ -1.56
EFCC1Q9HA90 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
EFCC1Q9HA90 MT-TC-201ENST00000387405 66 ntBASIC5.32□□□□□ -1.56
EFCC1Q9HA90 RNA5SP372-201ENST00000390836 115 ntBASIC5.32□□□□□ -1.56
EFCC1Q9HA90 TMSB10P2-201ENST00000416049 131 ntBASIC5.32□□□□□ -1.56
EFCC1Q9HA90 RPL23AP93-201ENST00000440847 484 ntBASIC5.32□□□□□ -1.56
EFCC1Q9HA90 RPL23AP2-201ENST00000471227 466 ntBASIC5.32□□□□□ -1.56
EFCC1Q9HA90 AC087385.1-201ENST00000475062 312 ntBASIC5.32□□□□□ -1.56
EFCC1Q9HA90 AC012158.1-204ENST00000483430 465 ntBASIC5.32□□□□□ -1.56
EFCC1Q9HA90 LEF1-218ENST00000512172 598 ntTSL 2 BASIC5.32□□□□□ -1.56
EFCC1Q9HA90 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
EFCC1Q9HA90 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC5.32□□□□□ -1.56
EFCC1Q9HA90 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC5.32□□□□□ -1.56
EFCC1Q9HA90 CBX3P8-201ENST00000532412 525 ntBASIC5.32□□□□□ -1.56
EFCC1Q9HA90 FKBP1BP1-201ENST00000553366 325 ntBASIC5.32□□□□□ -1.56
EFCC1Q9HA90 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC5.32□□□□□ -1.56
EFCC1Q9HA90 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC5.32□□□□□ -1.56
EFCC1Q9HA90 AC064801.1-201ENST00000612025 407 ntBASIC5.32□□□□□ -1.56
EFCC1Q9HA90 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC5.32□□□□□ -1.56
EFCC1Q9HA90 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC5.32□□□□□ -1.56
EFCC1Q9HA90 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
EFCC1Q9HA90 AP000542.2-201ENST00000623199 6179 ntBASIC5.32□□□□□ -1.56
EFCC1Q9HA90 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
EFCC1Q9HA90 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
EFCC1Q9HA90 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
EFCC1Q9HA90 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC5.31□□□□□ -1.56
EFCC1Q9HA90 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
EFCC1Q9HA90 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC5.31□□□□□ -1.56
EFCC1Q9HA90 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
EFCC1Q9HA90 RNU1-108P-201ENST00000362556 161 ntBASIC5.31□□□□□ -1.56
EFCC1Q9HA90 RNU6-525P-201ENST00000363685 104 ntBASIC5.31□□□□□ -1.56
EFCC1Q9HA90 RNA5SP513-201ENST00000364648 118 ntBASIC5.31□□□□□ -1.56
EFCC1Q9HA90 Y_RNA.551-201ENST00000384661 102 ntBASIC5.31□□□□□ -1.56
EFCC1Q9HA90 Y_RNA.577-201ENST00000384794 101 ntBASIC5.31□□□□□ -1.56
EFCC1Q9HA90 HSPE1P8-201ENST00000406997 288 ntBASIC5.31□□□□□ -1.56
EFCC1Q9HA90 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms