Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 AC107027.2-201ENST00000512197 115 ntBASIC5.2□□□□□ -1.58
USB1Q9BQ65 SNORA70.20-201ENST00000516848 126 ntBASIC5.2□□□□□ -1.58
USB1Q9BQ65 SNORA31.20-201ENST00000517111 133 ntBASIC5.2□□□□□ -1.58
USB1Q9BQ65 AC100767.1-201ENST00000528178 123 ntBASIC5.2□□□□□ -1.58
USB1Q9BQ65 HMGN2P36-201ENST00000529541 409 ntBASIC5.2□□□□□ -1.58
USB1Q9BQ65 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC5.2□□□□□ -1.58
USB1Q9BQ65 AC136624.4-201ENST00000573044 370 ntBASIC5.2□□□□□ -1.58
USB1Q9BQ65 RNU4ATAC-201ENST00000580972 127 ntBASIC5.2□□□□□ -1.58
USB1Q9BQ65 AC053481.4-201ENST00000583164 216 ntBASIC5.2□□□□□ -1.58
USB1Q9BQ65 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC5.2□□□□□ -1.58
USB1Q9BQ65 AC008521.2-201ENST00000591021 259 ntBASIC5.2□□□□□ -1.58
USB1Q9BQ65 AP001005.3-201ENST00000622049 129 ntBASIC5.2□□□□□ -1.58
USB1Q9BQ65 SNORA17.5-201ENST00000630429 132 ntBASIC5.2□□□□□ -1.58
USB1Q9BQ65 PSMD5-AS1-215ENST00000640622 205 ntBASIC5.2□□□□□ -1.58
USB1Q9BQ65 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
USB1Q9BQ65 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
USB1Q9BQ65 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
USB1Q9BQ65 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
USB1Q9BQ65 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
USB1Q9BQ65 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
USB1Q9BQ65 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
USB1Q9BQ65 OR13C1P-202ENST00000641378 2919 ntBASIC5.19□□□□□ -1.58
USB1Q9BQ65 SRP72P2-201ENST00000344851 1979 ntBASIC5.19□□□□□ -1.58
USB1Q9BQ65 RNU1-150P-201ENST00000362491 162 ntBASIC5.19□□□□□ -1.58
USB1Q9BQ65 RNU6-942P-201ENST00000363002 107 ntBASIC5.19□□□□□ -1.58
USB1Q9BQ65 RNU5F-3P-201ENST00000363767 117 ntBASIC5.19□□□□□ -1.58
USB1Q9BQ65 Y_RNA.498-201ENST00000384460 102 ntBASIC5.19□□□□□ -1.58
USB1Q9BQ65 Y_RNA.542-201ENST00000384641 111 ntBASIC5.19□□□□□ -1.58
USB1Q9BQ65 RNU6-381P-201ENST00000391259 108 ntBASIC5.19□□□□□ -1.58
USB1Q9BQ65 RNU6-1199P-201ENST00000411249 104 ntBASIC5.19□□□□□ -1.58
USB1Q9BQ65 RN7SKP293-201ENST00000411389 296 ntBASIC5.19□□□□□ -1.58
USB1Q9BQ65 OR2AH1P-201ENST00000425717 928 ntBASIC5.19□□□□□ -1.58
USB1Q9BQ65 MTND6P12-201ENST00000428247 522 ntBASIC5.19□□□□□ -1.58
USB1Q9BQ65 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC5.19□□□□□ -1.58
USB1Q9BQ65 AL591623.2-201ENST00000449978 222 ntBASIC5.19□□□□□ -1.58
USB1Q9BQ65 HLA-DPA3-207ENST00000454398 229 ntBASIC5.19□□□□□ -1.58
USB1Q9BQ65 RPS17P15-201ENST00000475609 349 ntBASIC5.19□□□□□ -1.58
USB1Q9BQ65 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC5.19□□□□□ -1.58
USB1Q9BQ65 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC5.19□□□□□ -1.58
USB1Q9BQ65 SNORD46.2-201ENST00000516021 102 ntBASIC5.19□□□□□ -1.58
USB1Q9BQ65 LINC00933-203ENST00000559812 219 ntBASIC5.19□□□□□ -1.58
USB1Q9BQ65 AC009127.3-201ENST00000570531 403 ntBASIC5.19□□□□□ -1.58
USB1Q9BQ65 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC5.19□□□□□ -1.58
USB1Q9BQ65 AP002826.1-201ENST00000608835 315 ntBASIC5.19□□□□□ -1.58
USB1Q9BQ65 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC5.19□□□□□ -1.58
USB1Q9BQ65 AC091932.3-201ENST00000624223 323 ntBASIC5.19□□□□□ -1.58
USB1Q9BQ65 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC5.19□□□□□ -1.58
USB1Q9BQ65 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
USB1Q9BQ65 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC5.19□□□□□ -1.58
USB1Q9BQ65 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.19□□□□□ -1.58
USB1Q9BQ65 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
USB1Q9BQ65 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
USB1Q9BQ65 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
USB1Q9BQ65 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
USB1Q9BQ65 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC5.18□□□□□ -1.58
USB1Q9BQ65 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
USB1Q9BQ65 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
USB1Q9BQ65 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
USB1Q9BQ65 MTND5P35-201ENST00000557537 1720 ntBASIC5.18□□□□□ -1.58
USB1Q9BQ65 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
USB1Q9BQ65 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
USB1Q9BQ65 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.18□□□□□ -1.58
USB1Q9BQ65 MIR323A-201ENST00000362199 86 ntBASIC5.18□□□□□ -1.58
USB1Q9BQ65 RNU6-199P-201ENST00000362954 107 ntBASIC5.18□□□□□ -1.58
USB1Q9BQ65 SNORD1C-201ENST00000363315 78 ntBASIC5.18□□□□□ -1.58
USB1Q9BQ65 RNU1-140P-201ENST00000365040 165 ntBASIC5.18□□□□□ -1.58
USB1Q9BQ65 RNA5-8SP5-201ENST00000365304 152 ntBASIC5.18□□□□□ -1.58
USB1Q9BQ65 RNA5SP122-201ENST00000384457 108 ntBASIC5.18□□□□□ -1.58
USB1Q9BQ65 RNU6-376P-201ENST00000384731 106 ntBASIC5.18□□□□□ -1.58
USB1Q9BQ65 PTGES3P4-201ENST00000426243 356 ntBASIC5.18□□□□□ -1.58
USB1Q9BQ65 AL590383.1-201ENST00000428602 75 ntBASIC5.18□□□□□ -1.58
USB1Q9BQ65 AC112220.1-201ENST00000434628 355 ntBASIC5.18□□□□□ -1.58
USB1Q9BQ65 AL162739.1-201ENST00000450606 307 ntBASIC5.18□□□□□ -1.58
USB1Q9BQ65 RNU1-88P-201ENST00000459274 128 ntBASIC5.18□□□□□ -1.58
USB1Q9BQ65 COPS8P2-201ENST00000473228 627 ntBASIC5.18□□□□□ -1.58
USB1Q9BQ65 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC5.18□□□□□ -1.58
USB1Q9BQ65 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC5.18□□□□□ -1.58
USB1Q9BQ65 RNU4-57P-201ENST00000515980 135 ntBASIC5.18□□□□□ -1.58
USB1Q9BQ65 RNA5SP54-201ENST00000516951 92 ntBASIC5.18□□□□□ -1.58
USB1Q9BQ65 RNU6-1183P-201ENST00000517054 60 ntBASIC5.18□□□□□ -1.58
USB1Q9BQ65 HSPE1P4-201ENST00000550617 308 ntBASIC5.18□□□□□ -1.58
USB1Q9BQ65 MIR4744-201ENST00000581563 82 ntBASIC5.18□□□□□ -1.58
USB1Q9BQ65 AC136601.2-201ENST00000604356 474 ntBASIC5.18□□□□□ -1.58
USB1Q9BQ65 TUG1_4.1-201ENST00000619464 181 ntBASIC5.18□□□□□ -1.58
USB1Q9BQ65 MIR3658-201ENST00000636291 56 ntBASIC5.18□□□□□ -1.58
USB1Q9BQ65 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
USB1Q9BQ65 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
USB1Q9BQ65 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
USB1Q9BQ65 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
USB1Q9BQ65 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.18□□□□□ -1.58
USB1Q9BQ65 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
USB1Q9BQ65 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
USB1Q9BQ65 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
USB1Q9BQ65 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
USB1Q9BQ65 AC005005.4-201ENST00000623789 16698 ntBASIC5.18□□□□□ -1.58
USB1Q9BQ65 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
USB1Q9BQ65 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
USB1Q9BQ65 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
USB1Q9BQ65 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
USB1Q9BQ65 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms