Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 MTATP6P30-201ENST00000443540 664 ntBASIC3.85□□□□□ -1.79
SNX27Q96L92 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC3.85□□□□□ -1.79
SNX27Q96L92 RPS20P20-201ENST00000460498 340 ntBASIC3.85□□□□□ -1.79
SNX27Q96L92 ARL2BPP6-201ENST00000512757 439 ntBASIC3.85□□□□□ -1.79
SNX27Q96L92 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC3.85□□□□□ -1.79
SNX27Q96L92 RNU6-718P-201ENST00000516166 105 ntBASIC3.85□□□□□ -1.79
SNX27Q96L92 RNU6-991P-201ENST00000516168 107 ntBASIC3.85□□□□□ -1.79
SNX27Q96L92 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.85□□□□□ -1.79
SNX27Q96L92 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC3.85□□□□□ -1.79
SNX27Q96L92 MIR3921-201ENST00000577308 85 ntBASIC3.85□□□□□ -1.79
SNX27Q96L92 AP001094.1-201ENST00000579805 193 ntBASIC3.85□□□□□ -1.79
SNX27Q96L92 AL360085.1-201ENST00000604713 532 ntBASIC3.85□□□□□ -1.79
SNX27Q96L92 AC106900.2-201ENST00000604994 317 ntBASIC3.85□□□□□ -1.79
SNX27Q96L92 AC008536.2-201ENST00000607284 349 ntBASIC3.85□□□□□ -1.79
SNX27Q96L92 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC3.85□□□□□ -1.79
SNX27Q96L92 AP003355.3-201ENST00000623465 114 ntBASIC3.85□□□□□ -1.79
SNX27Q96L92 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC3.85□□□□□ -1.79
SNX27Q96L92 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.85□□□□□ -1.79
SNX27Q96L92 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.85□□□□□ -1.79
SNX27Q96L92 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
SNX27Q96L92 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.85□□□□□ -1.79
SNX27Q96L92 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.85□□□□□ -1.79
SNX27Q96L92 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
SNX27Q96L92 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.84□□□□□ -1.79
SNX27Q96L92 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.79
SNX27Q96L92 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
SNX27Q96L92 SDAD1P2-201ENST00000441308 2028 ntBASIC3.84□□□□□ -1.79
SNX27Q96L92 Y_RNA.9-201ENST00000362354 101 ntBASIC3.84□□□□□ -1.79
SNX27Q96L92 Y_RNA.367-201ENST00000365544 101 ntBASIC3.84□□□□□ -1.79
SNX27Q96L92 MIR514A1-201ENST00000385133 98 ntBASIC3.84□□□□□ -1.79
SNX27Q96L92 AC068050.1-201ENST00000394891 380 ntBASIC3.84□□□□□ -1.79
SNX27Q96L92 RN7SKP140-201ENST00000411196 284 ntBASIC3.84□□□□□ -1.79
SNX27Q96L92 RN7SKP53-201ENST00000411337 315 ntBASIC3.84□□□□□ -1.79
SNX27Q96L92 SDCBPP3-201ENST00000419629 891 ntBASIC3.84□□□□□ -1.79
SNX27Q96L92 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
SNX27Q96L92 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.84□□□□□ -1.79
SNX27Q96L92 MTATP6P16-201ENST00000434543 526 ntBASIC3.84□□□□□ -1.79
SNX27Q96L92 BNIP3P2-201ENST00000441221 577 ntBASIC3.84□□□□□ -1.79
SNX27Q96L92 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.84□□□□□ -1.79
SNX27Q96L92 RPL27AP5-201ENST00000469428 449 ntBASIC3.84□□□□□ -1.79
SNX27Q96L92 AC126389.1-201ENST00000477436 290 ntBASIC3.84□□□□□ -1.79
SNX27Q96L92 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.84□□□□□ -1.79
SNX27Q96L92 AC117522.1-201ENST00000509821 380 ntBASIC3.84□□□□□ -1.79
SNX27Q96L92 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC3.84□□□□□ -1.79
SNX27Q96L92 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.84□□□□□ -1.79
SNX27Q96L92 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.84□□□□□ -1.79
SNX27Q96L92 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
SNX27Q96L92 AC091544.4-201ENST00000555268 342 ntBASIC3.84□□□□□ -1.79
SNX27Q96L92 AL512360.1-201ENST00000555346 234 ntBASIC3.84□□□□□ -1.79
SNX27Q96L92 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.84□□□□□ -1.79
SNX27Q96L92 HMGB1P33-201ENST00000563485 527 ntBASIC3.84□□□□□ -1.79
SNX27Q96L92 AC055876.1-202ENST00000567053 138 ntBASIC3.84□□□□□ -1.79
SNX27Q96L92 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.84□□□□□ -1.79
SNX27Q96L92 AP001596.2-201ENST00000608410 312 ntBASIC3.84□□□□□ -1.79
SNX27Q96L92 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC3.84□□□□□ -1.79
SNX27Q96L92 MIR7851-201ENST00000610611 160 ntBASIC3.84□□□□□ -1.79
SNX27Q96L92 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
SNX27Q96L92 U4.6-201ENST00000621618 127 ntBASIC3.84□□□□□ -1.79
SNX27Q96L92 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
SNX27Q96L92 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
SNX27Q96L92 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.83□□□□□ -1.8
SNX27Q96L92 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.83□□□□□ -1.8
SNX27Q96L92 RNA5SP42-201ENST00000364278 115 ntBASIC3.83□□□□□ -1.8
SNX27Q96L92 SNORD115-47-201ENST00000391226 86 ntBASIC3.83□□□□□ -1.8
SNX27Q96L92 RPS4XP8-201ENST00000402039 771 ntBASIC3.83□□□□□ -1.8
SNX27Q96L92 BTF3P7-201ENST00000407097 488 ntBASIC3.83□□□□□ -1.8
SNX27Q96L92 U3.39-201ENST00000408569 239 ntBASIC3.83□□□□□ -1.8
SNX27Q96L92 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.83□□□□□ -1.8
SNX27Q96L92 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC3.83□□□□□ -1.8
SNX27Q96L92 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.83□□□□□ -1.8
SNX27Q96L92 HMGB3P12-201ENST00000438745 556 ntBASIC3.83□□□□□ -1.8
SNX27Q96L92 AC020550.1-201ENST00000447385 163 ntBASIC3.83□□□□□ -1.8
SNX27Q96L92 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC3.83□□□□□ -1.8
SNX27Q96L92 AC027673.1-201ENST00000456245 405 ntBASIC3.83□□□□□ -1.8
SNX27Q96L92 AC004801.2-202ENST00000463559 283 ntBASIC3.83□□□□□ -1.8
SNX27Q96L92 AL121769.1-201ENST00000469473 401 ntBASIC3.83□□□□□ -1.8
SNX27Q96L92 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC3.83□□□□□ -1.8
SNX27Q96L92 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC3.83□□□□□ -1.8
SNX27Q96L92 AC116562.3-201ENST00000506136 177 ntBASIC3.83□□□□□ -1.8
SNX27Q96L92 SNORA70.16-201ENST00000516390 95 ntBASIC3.83□□□□□ -1.8
SNX27Q96L92 RNA5SP468-201ENST00000516782 93 ntBASIC3.83□□□□□ -1.8
SNX27Q96L92 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC3.83□□□□□ -1.8
SNX27Q96L92 AP001646.1-201ENST00000527936 915 ntBASIC3.83□□□□□ -1.8
SNX27Q96L92 AC068587.5-201ENST00000528506 175 ntBASIC3.83□□□□□ -1.8
SNX27Q96L92 HMGB1P6-201ENST00000569046 646 ntBASIC3.83□□□□□ -1.8
SNX27Q96L92 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.83□□□□□ -1.8
SNX27Q96L92 AC007687.1-201ENST00000602704 304 ntBASIC3.83□□□□□ -1.8
SNX27Q96L92 DPPA3P3-201ENST00000603842 430 ntBASIC3.83□□□□□ -1.8
SNX27Q96L92 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC3.83□□□□□ -1.8
SNX27Q96L92 ZNF680P1-201ENST00000436625 1469 ntBASIC3.83□□□□□ -1.8
SNX27Q96L92 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
SNX27Q96L92 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
SNX27Q96L92 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
SNX27Q96L92 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
SNX27Q96L92 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
SNX27Q96L92 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
SNX27Q96L92 Y_RNA.381-201ENST00000365666 102 ntBASIC3.82□□□□□ -1.8
SNX27Q96L92 SMIM11P1-201ENST00000369586 178 ntBASIC3.82□□□□□ -1.8
SNX27Q96L92 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.82□□□□□ -1.8
SNX27Q96L92 DEFB109C-201ENST00000382575 264 ntBASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 105.7 ms