Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 AC100793.4-201ENST00000613683 429 ntBASIC2.89□□□□□ -1.95
VMP1Q96GC9 AL162274.2-201ENST00000614406 332 ntBASIC2.89□□□□□ -1.95
VMP1Q96GC9 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC2.89□□□□□ -1.95
VMP1Q96GC9 AC007490.1-201ENST00000624321 703 ntBASIC2.89□□□□□ -1.95
VMP1Q96GC9 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.89□□□□□ -1.95
VMP1Q96GC9 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC2.89□□□□□ -1.95
VMP1Q96GC9 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.89□□□□□ -1.95
VMP1Q96GC9 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC2.88□□□□□ -1.95
VMP1Q96GC9 MTND4P35-201ENST00000604257 1375 ntBASIC2.88□□□□□ -1.95
VMP1Q96GC9 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.88□□□□□ -1.95
VMP1Q96GC9 RNU6-660P-201ENST00000364566 109 ntBASIC2.88□□□□□ -1.95
VMP1Q96GC9 RNU6-817P-201ENST00000391083 104 ntBASIC2.88□□□□□ -1.95
VMP1Q96GC9 AL138885.1-201ENST00000405921 675 ntBASIC2.88□□□□□ -1.95
VMP1Q96GC9 RPL23AP39-201ENST00000415533 405 ntBASIC2.88□□□□□ -1.95
VMP1Q96GC9 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC2.88□□□□□ -1.95
VMP1Q96GC9 AC006366.1-201ENST00000422002 759 ntBASIC2.88□□□□□ -1.95
VMP1Q96GC9 RPS27AP14-201ENST00000422868 454 ntBASIC2.88□□□□□ -1.95
VMP1Q96GC9 MICF-203ENST00000432679 129 ntBASIC2.88□□□□□ -1.95
VMP1Q96GC9 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC2.88□□□□□ -1.95
VMP1Q96GC9 AL606662.1-201ENST00000445763 553 ntBASIC2.88□□□□□ -1.95
VMP1Q96GC9 ZNF736P5Y-201ENST00000451173 805 ntBASIC2.88□□□□□ -1.95
VMP1Q96GC9 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC2.88□□□□□ -1.95
VMP1Q96GC9 RN7SL432P-201ENST00000484057 298 ntBASIC2.88□□□□□ -1.95
VMP1Q96GC9 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC2.88□□□□□ -1.95
VMP1Q96GC9 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.88□□□□□ -1.95
VMP1Q96GC9 RNA5SP341-201ENST00000516261 117 ntBASIC2.88□□□□□ -1.95
VMP1Q96GC9 RNA5SP367-201ENST00000516557 118 ntBASIC2.88□□□□□ -1.95
VMP1Q96GC9 RN7SKP272-201ENST00000516988 232 ntBASIC2.88□□□□□ -1.95
VMP1Q96GC9 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC2.88□□□□□ -1.95
VMP1Q96GC9 PSMA2P1-201ENST00000526365 646 ntBASIC2.88□□□□□ -1.95
VMP1Q96GC9 AL121821.2-201ENST00000556081 394 ntBASIC2.88□□□□□ -1.95
VMP1Q96GC9 ISCA1P3-201ENST00000577104 373 ntBASIC2.88□□□□□ -1.95
VMP1Q96GC9 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC2.88□□□□□ -1.95
VMP1Q96GC9 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC2.88□□□□□ -1.95
VMP1Q96GC9 AC104763.2-201ENST00000604179 382 ntBASIC2.88□□□□□ -1.95
VMP1Q96GC9 AP000787.2-201ENST00000604432 568 ntBASIC2.88□□□□□ -1.95
VMP1Q96GC9 AC007363.1-201ENST00000604736 620 ntBASIC2.88□□□□□ -1.95
VMP1Q96GC9 MIR7157-201ENST00000635801 60 ntBASIC2.88□□□□□ -1.95
VMP1Q96GC9 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC2.88□□□□□ -1.95
VMP1Q96GC9 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
VMP1Q96GC9 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
VMP1Q96GC9 RNU6-288P-201ENST00000363690 104 ntBASIC2.87□□□□□ -1.95
VMP1Q96GC9 RNU6-220P-201ENST00000390919 107 ntBASIC2.87□□□□□ -1.95
VMP1Q96GC9 SNORA48.5-201ENST00000391143 135 ntBASIC2.87□□□□□ -1.95
VMP1Q96GC9 AL590004.2-201ENST00000404787 371 ntBASIC2.87□□□□□ -1.95
VMP1Q96GC9 USP9YP6-201ENST00000413550 854 ntBASIC2.87□□□□□ -1.95
VMP1Q96GC9 AC098592.1-201ENST00000419352 333 ntBASIC2.87□□□□□ -1.95
VMP1Q96GC9 AL353777.1-201ENST00000425552 326 ntBASIC2.87□□□□□ -1.95
VMP1Q96GC9 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.87□□□□□ -1.95
VMP1Q96GC9 RPL22P17-201ENST00000438729 315 ntBASIC2.87□□□□□ -1.95
VMP1Q96GC9 ZNF736P12Y-201ENST00000443152 1243 ntBASIC2.87□□□□□ -1.95
VMP1Q96GC9 AL606517.1-201ENST00000446914 387 ntBASIC2.87□□□□□ -1.95
VMP1Q96GC9 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC2.87□□□□□ -1.95
VMP1Q96GC9 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC2.87□□□□□ -1.95
VMP1Q96GC9 NIPA2P5-201ENST00000452282 464 ntBASIC2.87□□□□□ -1.95
VMP1Q96GC9 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC2.87□□□□□ -1.95
VMP1Q96GC9 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC2.87□□□□□ -1.95
VMP1Q96GC9 AC008571.1-201ENST00000467232 300 ntBASIC2.87□□□□□ -1.95
VMP1Q96GC9 AC008885.1-201ENST00000514930 301 ntBASIC2.87□□□□□ -1.95
VMP1Q96GC9 RNU6-678P-201ENST00000516832 109 ntBASIC2.87□□□□□ -1.95
VMP1Q96GC9 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC2.87□□□□□ -1.95
VMP1Q96GC9 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC2.87□□□□□ -1.95
VMP1Q96GC9 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC2.87□□□□□ -1.95
VMP1Q96GC9 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC2.87□□□□□ -1.95
VMP1Q96GC9 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC2.87□□□□□ -1.95
VMP1Q96GC9 MIR3199-1-201ENST00000582434 88 ntBASIC2.87□□□□□ -1.95
VMP1Q96GC9 MIR4658-201ENST00000584344 65 ntBASIC2.87□□□□□ -1.95
VMP1Q96GC9 AP001981.2-201ENST00000603241 418 ntBASIC2.87□□□□□ -1.95
VMP1Q96GC9 AL358072.1-201ENST00000604156 575 ntBASIC2.87□□□□□ -1.95
VMP1Q96GC9 AL049779.4-201ENST00000604500 156 ntBASIC2.87□□□□□ -1.95
VMP1Q96GC9 AC121334.2-201ENST00000605387 271 ntBASIC2.87□□□□□ -1.95
VMP1Q96GC9 AL391813.2-201ENST00000609113 322 ntBASIC2.87□□□□□ -1.95
VMP1Q96GC9 HMGB1P24-202ENST00000615653 685 ntBASIC2.87□□□□□ -1.95
VMP1Q96GC9 uc_338.12-201ENST00000616344 181 ntBASIC2.87□□□□□ -1.95
VMP1Q96GC9 U6.99-201ENST00000637524 83 ntBASIC2.87□□□□□ -1.95
VMP1Q96GC9 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.87□□□□□ -1.95
VMP1Q96GC9 AC004944.1-201ENST00000517807 3059 ntBASIC2.87□□□□□ -1.95
VMP1Q96GC9 AC108206.1-201ENST00000570186 4159 ntBASIC2.87□□□□□ -1.95
VMP1Q96GC9 MTND5P30-201ENST00000452896 1731 ntBASIC2.86□□□□□ -1.95
VMP1Q96GC9 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
VMP1Q96GC9 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
VMP1Q96GC9 Y_RNA.97-201ENST00000363094 102 ntBASIC2.86□□□□□ -1.95
VMP1Q96GC9 SNORA38-201ENST00000363946 132 ntBASIC2.86□□□□□ -1.95
VMP1Q96GC9 SNORA71.1-201ENST00000364523 117 ntBASIC2.86□□□□□ -1.95
VMP1Q96GC9 RNU6-19P-201ENST00000384718 107 ntBASIC2.86□□□□□ -1.95
VMP1Q96GC9 MIR218-1-201ENST00000384999 110 ntBASIC2.86□□□□□ -1.95
VMP1Q96GC9 RPS12P24-201ENST00000412619 387 ntBASIC2.86□□□□□ -1.95
VMP1Q96GC9 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC2.86□□□□□ -1.95
VMP1Q96GC9 AL592045.1-201ENST00000429867 352 ntBASIC2.86□□□□□ -1.95
VMP1Q96GC9 EEF1B2P7-201ENST00000451177 676 ntBASIC2.86□□□□□ -1.95
VMP1Q96GC9 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC2.86□□□□□ -1.95
VMP1Q96GC9 RPL23AP11-201ENST00000475260 469 ntBASIC2.86□□□□□ -1.95
VMP1Q96GC9 MTND2P14-201ENST00000482139 351 ntBASIC2.86□□□□□ -1.95
VMP1Q96GC9 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC2.86□□□□□ -1.95
VMP1Q96GC9 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC2.86□□□□□ -1.95
VMP1Q96GC9 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.86□□□□□ -1.95
VMP1Q96GC9 SCARNA3-201ENST00000517097 143 ntBASIC2.86□□□□□ -1.95
VMP1Q96GC9 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC2.86□□□□□ -1.95
VMP1Q96GC9 AC025881.1-201ENST00000518851 512 ntBASIC2.86□□□□□ -1.95
VMP1Q96GC9 OR4R1P-201ENST00000529879 463 ntBASIC2.86□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 109.8 ms