Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 AP000756.2-201ENST00000624168 2567 ntBASIC4.73□□□□□ -1.65
SHKBP1Q8TBC3 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.73□□□□□ -1.65
SHKBP1Q8TBC3 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
SHKBP1Q8TBC3 AP000542.2-201ENST00000623199 6179 ntBASIC4.73□□□□□ -1.65
SHKBP1Q8TBC3 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
SHKBP1Q8TBC3 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
SHKBP1Q8TBC3 SNORA69.1-201ENST00000390904 137 ntBASIC4.73□□□□□ -1.65
SHKBP1Q8TBC3 Y_RNA.592-201ENST00000410274 109 ntBASIC4.73□□□□□ -1.65
SHKBP1Q8TBC3 AC092423.1-201ENST00000430165 186 ntBASIC4.73□□□□□ -1.65
SHKBP1Q8TBC3 FTLP19-201ENST00000433300 394 ntBASIC4.73□□□□□ -1.65
SHKBP1Q8TBC3 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.73□□□□□ -1.65
SHKBP1Q8TBC3 RPL23AP22-201ENST00000437556 453 ntBASIC4.73□□□□□ -1.65
SHKBP1Q8TBC3 RN7SL98P-201ENST00000462271 300 ntBASIC4.73□□□□□ -1.65
SHKBP1Q8TBC3 AC005798.1-201ENST00000513715 387 ntBASIC4.73□□□□□ -1.65
SHKBP1Q8TBC3 RNU6-346P-201ENST00000516288 111 ntBASIC4.73□□□□□ -1.65
SHKBP1Q8TBC3 AC024405.2-202ENST00000532731 184 ntBASIC4.73□□□□□ -1.65
SHKBP1Q8TBC3 CYCSP29-201ENST00000533731 318 ntBASIC4.73□□□□□ -1.65
SHKBP1Q8TBC3 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
SHKBP1Q8TBC3 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC4.73□□□□□ -1.65
SHKBP1Q8TBC3 MIR3160-1-201ENST00000577972 85 ntBASIC4.73□□□□□ -1.65
SHKBP1Q8TBC3 MIR5701-3-201ENST00000578890 82 ntBASIC4.73□□□□□ -1.65
SHKBP1Q8TBC3 MIR5701-1-201ENST00000585138 82 ntBASIC4.73□□□□□ -1.65
SHKBP1Q8TBC3 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
SHKBP1Q8TBC3 TUG1_2.1-201ENST00000614234 87 ntBASIC4.73□□□□□ -1.65
SHKBP1Q8TBC3 MIR5701-2-201ENST00000615634 82 ntBASIC4.73□□□□□ -1.65
SHKBP1Q8TBC3 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
SHKBP1Q8TBC3 EOGT-210ENST00000615922 1931 ntBASIC4.73□□□□□ -1.65
SHKBP1Q8TBC3 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
SHKBP1Q8TBC3 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
SHKBP1Q8TBC3 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
SHKBP1Q8TBC3 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.73□□□□□ -1.65
SHKBP1Q8TBC3 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
SHKBP1Q8TBC3 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC4.73□□□□□ -1.65
SHKBP1Q8TBC3 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.72□□□□□ -1.65
SHKBP1Q8TBC3 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
SHKBP1Q8TBC3 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.72□□□□□ -1.65
SHKBP1Q8TBC3 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.72□□□□□ -1.65
SHKBP1Q8TBC3 Y_RNA.16-201ENST00000362421 102 ntBASIC4.72□□□□□ -1.65
SHKBP1Q8TBC3 Y_RNA.458-201ENST00000384240 102 ntBASIC4.72□□□□□ -1.65
SHKBP1Q8TBC3 SNORD51-201ENST00000384320 80 ntBASIC4.72□□□□□ -1.65
SHKBP1Q8TBC3 RNU4-65P-201ENST00000410473 140 ntBASIC4.72□□□□□ -1.65
SHKBP1Q8TBC3 AL160275.3-201ENST00000423876 471 ntBASIC4.72□□□□□ -1.65
SHKBP1Q8TBC3 AC006946.1-201ENST00000429106 328 ntBASIC4.72□□□□□ -1.65
SHKBP1Q8TBC3 AL445305.1-201ENST00000432577 575 ntBASIC4.72□□□□□ -1.65
SHKBP1Q8TBC3 AC011998.1-201ENST00000433403 117 ntBASIC4.72□□□□□ -1.65
SHKBP1Q8TBC3 AC073063.1-201ENST00000434352 607 ntBASIC4.72□□□□□ -1.65
SHKBP1Q8TBC3 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC4.72□□□□□ -1.65
SHKBP1Q8TBC3 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC4.72□□□□□ -1.65
SHKBP1Q8TBC3 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC4.72□□□□□ -1.65
SHKBP1Q8TBC3 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC4.72□□□□□ -1.65
SHKBP1Q8TBC3 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC4.72□□□□□ -1.65
SHKBP1Q8TBC3 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC4.72□□□□□ -1.65
SHKBP1Q8TBC3 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC4.72□□□□□ -1.65
SHKBP1Q8TBC3 RN7SKP46-201ENST00000515942 234 ntBASIC4.72□□□□□ -1.65
SHKBP1Q8TBC3 RNU6-861P-201ENST00000516745 106 ntBASIC4.72□□□□□ -1.65
SHKBP1Q8TBC3 AC069113.1-201ENST00000517763 267 ntBASIC4.72□□□□□ -1.65
SHKBP1Q8TBC3 AMZ2P1-203ENST00000565833 850 ntBASIC4.72□□□□□ -1.65
SHKBP1Q8TBC3 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC4.72□□□□□ -1.65
SHKBP1Q8TBC3 FTO-223ENST00000640179 210 ntTSL 5 BASIC4.72□□□□□ -1.65
SHKBP1Q8TBC3 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
SHKBP1Q8TBC3 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC4.72□□□□□ -1.65
SHKBP1Q8TBC3 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
SHKBP1Q8TBC3 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.72□□□□□ -1.65
SHKBP1Q8TBC3 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.72□□□□□ -1.65
SHKBP1Q8TBC3 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
SHKBP1Q8TBC3 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
SHKBP1Q8TBC3 RLIMP1-201ENST00000339626 1680 ntBASIC4.71□□□□□ -1.66
SHKBP1Q8TBC3 AL359893.1-201ENST00000447628 1580 ntBASIC4.71□□□□□ -1.66
SHKBP1Q8TBC3 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
SHKBP1Q8TBC3 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
SHKBP1Q8TBC3 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.71□□□□□ -1.66
SHKBP1Q8TBC3 RNU6-371P-201ENST00000364283 108 ntBASIC4.71□□□□□ -1.66
SHKBP1Q8TBC3 RNU6-1317P-201ENST00000364582 104 ntBASIC4.71□□□□□ -1.66
SHKBP1Q8TBC3 Y_RNA.533-201ENST00000384596 114 ntBASIC4.71□□□□□ -1.66
SHKBP1Q8TBC3 RNU11-4P-201ENST00000391149 133 ntBASIC4.71□□□□□ -1.66
SHKBP1Q8TBC3 RNU6ATAC16P-201ENST00000408591 138 ntBASIC4.71□□□□□ -1.66
SHKBP1Q8TBC3 RNU2-21P-201ENST00000410368 188 ntBASIC4.71□□□□□ -1.66
SHKBP1Q8TBC3 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC4.71□□□□□ -1.66
SHKBP1Q8TBC3 OR4C10P-201ENST00000434991 931 ntBASIC4.71□□□□□ -1.66
SHKBP1Q8TBC3 PHBP16-201ENST00000446318 950 ntBASIC4.71□□□□□ -1.66
SHKBP1Q8TBC3 NUTF2P3-201ENST00000448540 384 ntBASIC4.71□□□□□ -1.66
SHKBP1Q8TBC3 AL162389.1-201ENST00000449233 177 ntBASIC4.71□□□□□ -1.66
SHKBP1Q8TBC3 RPL7P23-201ENST00000493874 747 ntBASIC4.71□□□□□ -1.66
SHKBP1Q8TBC3 AKIRIN2P1-201ENST00000505898 352 ntBASIC4.71□□□□□ -1.66
SHKBP1Q8TBC3 AL359273.1-201ENST00000510918 627 ntBASIC4.71□□□□□ -1.66
SHKBP1Q8TBC3 AC113155.1-201ENST00000511141 769 ntBASIC4.71□□□□□ -1.66
SHKBP1Q8TBC3 SERF1AP1-201ENST00000514575 187 ntBASIC4.71□□□□□ -1.66
SHKBP1Q8TBC3 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC4.71□□□□□ -1.66
SHKBP1Q8TBC3 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC4.71□□□□□ -1.66
SHKBP1Q8TBC3 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
SHKBP1Q8TBC3 AC025884.1-201ENST00000556034 378 ntBASIC4.71□□□□□ -1.66
SHKBP1Q8TBC3 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC4.71□□□□□ -1.66
SHKBP1Q8TBC3 MIR4300-201ENST00000581016 96 ntBASIC4.71□□□□□ -1.66
SHKBP1Q8TBC3 AC007566.2-201ENST00000603642 413 ntBASIC4.71□□□□□ -1.66
SHKBP1Q8TBC3 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.71□□□□□ -1.66
SHKBP1Q8TBC3 AL445567.2-201ENST00000618935 498 ntBASIC4.71□□□□□ -1.66
SHKBP1Q8TBC3 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
SHKBP1Q8TBC3 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC4.71□□□□□ -1.66
SHKBP1Q8TBC3 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
SHKBP1Q8TBC3 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms