Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.31□□□□□ -1.72
YBX1P67809 AC091178.1-203ENST00000584586 279 ntBASIC4.31□□□□□ -1.72
YBX1P67809 BPIFA4P-203ENST00000603168 689 ntBASIC4.31□□□□□ -1.72
YBX1P67809 AL160290.3-201ENST00000604869 165 ntBASIC4.31□□□□□ -1.72
YBX1P67809 RNU6-85P-201ENST00000605989 107 ntBASIC4.31□□□□□ -1.72
YBX1P67809 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.31□□□□□ -1.72
YBX1P67809 AC137590.2-201ENST00000619709 240 ntBASIC4.31□□□□□ -1.72
YBX1P67809 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
YBX1P67809 MTND5P6-201ENST00000422338 1798 ntBASIC4.31□□□□□ -1.72
YBX1P67809 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
YBX1P67809 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC4.31□□□□□ -1.72
YBX1P67809 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
YBX1P67809 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
YBX1P67809 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
YBX1P67809 PABPC1P7-201ENST00000413177 1513 ntBASIC4.31□□□□□ -1.72
YBX1P67809 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
YBX1P67809 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
YBX1P67809 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
YBX1P67809 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.3□□□□□ -1.72
YBX1P67809 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
YBX1P67809 AC025031.4-201ENST00000621248 3271 ntBASIC4.3□□□□□ -1.72
YBX1P67809 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.3□□□□□ -1.72
YBX1P67809 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
YBX1P67809 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.3□□□□□ -1.72
YBX1P67809 Y_RNA.26-201ENST00000362539 101 ntBASIC4.3□□□□□ -1.72
YBX1P67809 RNA5SP447-201ENST00000363749 119 ntBASIC4.3□□□□□ -1.72
YBX1P67809 Y_RNA.276-201ENST00000364732 109 ntBASIC4.3□□□□□ -1.72
YBX1P67809 Y_RNA.480-201ENST00000384364 102 ntBASIC4.3□□□□□ -1.72
YBX1P67809 AL590704.1-201ENST00000402856 794 ntBASIC4.3□□□□□ -1.72
YBX1P67809 RPL7P2-201ENST00000427639 268 ntBASIC4.3□□□□□ -1.72
YBX1P67809 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.3□□□□□ -1.72
YBX1P67809 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.3□□□□□ -1.72
YBX1P67809 AC008264.1-201ENST00000447612 367 ntBASIC4.3□□□□□ -1.72
YBX1P67809 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC4.3□□□□□ -1.72
YBX1P67809 RPL37P6-201ENST00000460682 294 ntBASIC4.3□□□□□ -1.72
YBX1P67809 AP000942.1-201ENST00000463969 747 ntBASIC4.3□□□□□ -1.72
YBX1P67809 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
YBX1P67809 RPL31P60-201ENST00000478450 367 ntBASIC4.3□□□□□ -1.72
YBX1P67809 AC069499.1-201ENST00000489433 509 ntBASIC4.3□□□□□ -1.72
YBX1P67809 AC093852.1-201ENST00000503587 266 ntBASIC4.3□□□□□ -1.72
YBX1P67809 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC4.3□□□□□ -1.72
YBX1P67809 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC4.3□□□□□ -1.72
YBX1P67809 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.3□□□□□ -1.72
YBX1P67809 Y_RNA.673-201ENST00000516306 88 ntBASIC4.3□□□□□ -1.72
YBX1P67809 SNORA40.15-201ENST00000516884 107 ntBASIC4.3□□□□□ -1.72
YBX1P67809 RN7SKP234-201ENST00000517173 224 ntBASIC4.3□□□□□ -1.72
YBX1P67809 IGKV2D-23-201ENST00000518179 286 ntBASIC4.3□□□□□ -1.72
YBX1P67809 ERHP1-201ENST00000523006 310 ntBASIC4.3□□□□□ -1.72
YBX1P67809 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC4.3□□□□□ -1.72
YBX1P67809 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.3□□□□□ -1.72
YBX1P67809 AC006600.1-201ENST00000572529 153 ntBASIC4.3□□□□□ -1.72
YBX1P67809 MIR4273-201ENST00000582824 84 ntBASIC4.3□□□□□ -1.72
YBX1P67809 AC067852.3-201ENST00000589177 561 ntBASIC4.3□□□□□ -1.72
YBX1P67809 AC093227.2-201ENST00000589357 285 ntBASIC4.3□□□□□ -1.72
YBX1P67809 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.3□□□□□ -1.72
YBX1P67809 AC098479.1-201ENST00000609225 154 ntBASIC4.3□□□□□ -1.72
YBX1P67809 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.3□□□□□ -1.72
YBX1P67809 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC4.3□□□□□ -1.72
YBX1P67809 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
YBX1P67809 AC092435.4-201ENST00000623012 4159 ntBASIC4.3□□□□□ -1.72
YBX1P67809 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
YBX1P67809 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.29□□□□□ -1.72
YBX1P67809 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
YBX1P67809 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
YBX1P67809 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.29□□□□□ -1.72
YBX1P67809 RNA5SP52-201ENST00000362448 134 ntBASIC4.29□□□□□ -1.72
YBX1P67809 RNU6-770P-201ENST00000363929 105 ntBASIC4.29□□□□□ -1.72
YBX1P67809 RNU6-806P-201ENST00000365147 105 ntBASIC4.29□□□□□ -1.72
YBX1P67809 RNU6-356P-201ENST00000384140 107 ntBASIC4.29□□□□□ -1.72
YBX1P67809 SNORA70E-201ENST00000384492 135 ntBASIC4.29□□□□□ -1.72
YBX1P67809 Y_RNA.551-201ENST00000384661 102 ntBASIC4.29□□□□□ -1.72
YBX1P67809 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
YBX1P67809 RPL21P90-201ENST00000415692 466 ntBASIC4.29□□□□□ -1.72
YBX1P67809 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC4.29□□□□□ -1.72
YBX1P67809 LAMTOR3P1-201ENST00000428620 370 ntBASIC4.29□□□□□ -1.72
YBX1P67809 AC004975.1-201ENST00000428733 208 ntBASIC4.29□□□□□ -1.72
YBX1P67809 AL133396.1-201ENST00000432048 687 ntBASIC4.29□□□□□ -1.72
YBX1P67809 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC4.29□□□□□ -1.72
YBX1P67809 AL162591.2-201ENST00000449634 317 ntBASIC4.29□□□□□ -1.72
YBX1P67809 RNU6-953P-201ENST00000459154 107 ntBASIC4.29□□□□□ -1.72
YBX1P67809 RNU7-169P-201ENST00000459456 61 ntBASIC4.29□□□□□ -1.72
YBX1P67809 RN7SL41P-201ENST00000476144 297 ntBASIC4.29□□□□□ -1.72
YBX1P67809 GZMAP1-201ENST00000503054 631 ntBASIC4.29□□□□□ -1.72
YBX1P67809 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC4.29□□□□□ -1.72
YBX1P67809 AC025465.3-201ENST00000510570 311 ntBASIC4.29□□□□□ -1.72
YBX1P67809 SNORA25.11-201ENST00000515935 105 ntBASIC4.29□□□□□ -1.72
YBX1P67809 RNU7-4P-201ENST00000516961 62 ntBASIC4.29□□□□□ -1.72
YBX1P67809 AC008694.2-201ENST00000517591 306 ntBASIC4.29□□□□□ -1.72
YBX1P67809 AP003385.6-201ENST00000531603 374 ntBASIC4.29□□□□□ -1.72
YBX1P67809 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC4.29□□□□□ -1.72
YBX1P67809 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.29□□□□□ -1.72
YBX1P67809 RRN3P3-201ENST00000549207 578 ntBASIC4.29□□□□□ -1.72
YBX1P67809 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.29□□□□□ -1.72
YBX1P67809 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.29□□□□□ -1.72
YBX1P67809 MTND6P33-201ENST00000571794 183 ntBASIC4.29□□□□□ -1.72
YBX1P67809 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC4.29□□□□□ -1.72
YBX1P67809 RAC1P9-201ENST00000604990 392 ntBASIC4.29□□□□□ -1.72
YBX1P67809 AC091905.2-201ENST00000623143 306 ntBASIC4.29□□□□□ -1.72
YBX1P67809 AC068724.3-201ENST00000625906 87 ntBASIC4.29□□□□□ -1.72
YBX1P67809 U2.22-201ENST00000636441 106 ntBASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms