Protein–RNA interactions for Protein: P62684

HERVK_113, Endogenous retrovirus group K member 113 Gag polyprotein, humanhuman

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERVK_113P62684 RPL23AP84-201ENST00000571193 464 ntBASIC4.39□□□□□ -1.71
HERVK_113P62684 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC4.39□□□□□ -1.71
HERVK_113P62684 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC4.39□□□□□ -1.71
HERVK_113P62684 AC008521.1-201ENST00000587471 187 ntBASIC4.39□□□□□ -1.71
HERVK_113P62684 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC4.39□□□□□ -1.71
HERVK_113P62684 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC4.39□□□□□ -1.71
HERVK_113P62684 APOOP1-201ENST00000604695 592 ntBASIC4.39□□□□□ -1.71
HERVK_113P62684 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
HERVK_113P62684 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.39□□□□□ -1.71
HERVK_113P62684 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.39□□□□□ -1.71
HERVK_113P62684 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
HERVK_113P62684 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
HERVK_113P62684 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
HERVK_113P62684 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
HERVK_113P62684 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC4.39□□□□□ -1.71
HERVK_113P62684 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.38□□□□□ -1.71
HERVK_113P62684 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
HERVK_113P62684 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
HERVK_113P62684 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.38□□□□□ -1.71
HERVK_113P62684 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC4.38□□□□□ -1.71
HERVK_113P62684 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
HERVK_113P62684 SNORD113-7-201ENST00000363762 77 ntBASIC4.38□□□□□ -1.71
HERVK_113P62684 U3.15-201ENST00000365398 212 ntBASIC4.38□□□□□ -1.71
HERVK_113P62684 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
HERVK_113P62684 RNVU1-14-201ENST00000384770 164 ntBASIC4.38□□□□□ -1.71
HERVK_113P62684 RNU2-43P-201ENST00000410306 190 ntBASIC4.38□□□□□ -1.71
HERVK_113P62684 RNU6-1304P-201ENST00000411374 106 ntBASIC4.38□□□□□ -1.71
HERVK_113P62684 ATP5A1P2-201ENST00000412323 255 ntBASIC4.38□□□□□ -1.71
HERVK_113P62684 CALM2P2-201ENST00000428512 440 ntBASIC4.38□□□□□ -1.71
HERVK_113P62684 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC4.38□□□□□ -1.71
HERVK_113P62684 AL121871.1-201ENST00000443413 436 ntBASIC4.38□□□□□ -1.71
HERVK_113P62684 RPS3AP46-201ENST00000448352 682 ntBASIC4.38□□□□□ -1.71
HERVK_113P62684 NDUFS5P3-201ENST00000450668 321 ntBASIC4.38□□□□□ -1.71
HERVK_113P62684 AC107399.1-201ENST00000451226 265 ntBASIC4.38□□□□□ -1.71
HERVK_113P62684 NIPA2P5-201ENST00000452282 464 ntBASIC4.38□□□□□ -1.71
HERVK_113P62684 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC4.38□□□□□ -1.71
HERVK_113P62684 FGF7P3-201ENST00000454645 303 ntBASIC4.38□□□□□ -1.71
HERVK_113P62684 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC4.38□□□□□ -1.71
HERVK_113P62684 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC4.38□□□□□ -1.71
HERVK_113P62684 RNU6-1088P-201ENST00000516850 104 ntBASIC4.38□□□□□ -1.71
HERVK_113P62684 SNORA25.17-201ENST00000517184 124 ntBASIC4.38□□□□□ -1.71
HERVK_113P62684 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC4.38□□□□□ -1.71
HERVK_113P62684 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC4.38□□□□□ -1.71
HERVK_113P62684 GNRHR2P1-201ENST00000555315 631 ntBASIC4.38□□□□□ -1.71
HERVK_113P62684 AC012409.4-201ENST00000612923 249 ntBASIC4.38□□□□□ -1.71
HERVK_113P62684 AL136964.1-201ENST00000622038 2990 ntBASIC4.38□□□□□ -1.71
HERVK_113P62684 AL359757.2-201ENST00000624309 274 ntBASIC4.38□□□□□ -1.71
HERVK_113P62684 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC4.38□□□□□ -1.71
HERVK_113P62684 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
HERVK_113P62684 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
HERVK_113P62684 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC4.38□□□□□ -1.71
HERVK_113P62684 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
HERVK_113P62684 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC4.38□□□□□ -1.71
HERVK_113P62684 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
HERVK_113P62684 MTND5P1-201ENST00000445440 1375 ntBASIC4.38□□□□□ -1.71
HERVK_113P62684 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
HERVK_113P62684 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
HERVK_113P62684 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
HERVK_113P62684 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.38□□□□□ -1.71
HERVK_113P62684 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.37□□□□□ -1.71
HERVK_113P62684 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.37□□□□□ -1.71
HERVK_113P62684 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
HERVK_113P62684 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC4.37□□□□□ -1.71
HERVK_113P62684 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.37□□□□□ -1.71
HERVK_113P62684 RNU6-43P-201ENST00000384302 107 ntBASIC4.37□□□□□ -1.71
HERVK_113P62684 MIR218-2-201ENST00000385006 110 ntBASIC4.37□□□□□ -1.71
HERVK_113P62684 RNA5SP219-201ENST00000390940 113 ntBASIC4.37□□□□□ -1.71
HERVK_113P62684 AC110754.1-201ENST00000399740 601 ntBASIC4.37□□□□□ -1.71
HERVK_113P62684 RNU4-14P-201ENST00000410858 122 ntBASIC4.37□□□□□ -1.71
HERVK_113P62684 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC4.37□□□□□ -1.71
HERVK_113P62684 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC4.37□□□□□ -1.71
HERVK_113P62684 TRBVA-201ENST00000498804 316 ntBASIC4.37□□□□□ -1.71
HERVK_113P62684 BTF3L4P4-201ENST00000506381 449 ntBASIC4.37□□□□□ -1.71
HERVK_113P62684 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
HERVK_113P62684 AC098591.2-201ENST00000510152 315 ntBASIC4.37□□□□□ -1.71
HERVK_113P62684 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC4.37□□□□□ -1.71
HERVK_113P62684 RPL39P5-202ENST00000512505 151 ntBASIC4.37□□□□□ -1.71
HERVK_113P62684 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC4.37□□□□□ -1.71
HERVK_113P62684 AC090136.1-201ENST00000520009 240 ntBASIC4.37□□□□□ -1.71
HERVK_113P62684 AP000889.2-201ENST00000532684 490 ntBASIC4.37□□□□□ -1.71
HERVK_113P62684 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC4.37□□□□□ -1.71
HERVK_113P62684 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC4.37□□□□□ -1.71
HERVK_113P62684 MIR4790-201ENST00000577799 79 ntBASIC4.37□□□□□ -1.71
HERVK_113P62684 AC020914.4-201ENST00000597690 277 ntBASIC4.37□□□□□ -1.71
HERVK_113P62684 AL138889.2-201ENST00000603883 242 ntBASIC4.37□□□□□ -1.71
HERVK_113P62684 AL627309.6-201ENST00000606857 840 ntBASIC4.37□□□□□ -1.71
HERVK_113P62684 MIR486-1-201ENST00000612171 68 ntBASIC4.37□□□□□ -1.71
HERVK_113P62684 AC004696.1-201ENST00000614345 607 ntBASIC4.37□□□□□ -1.71
HERVK_113P62684 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC4.37□□□□□ -1.71
HERVK_113P62684 AC119674.1-207ENST00000641355 633 ntBASIC4.37□□□□□ -1.71
HERVK_113P62684 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
HERVK_113P62684 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
HERVK_113P62684 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
HERVK_113P62684 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC4.37□□□□□ -1.71
HERVK_113P62684 AC018529.3-201ENST00000624212 2254 ntBASIC4.37□□□□□ -1.71
HERVK_113P62684 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
HERVK_113P62684 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
HERVK_113P62684 PRO1804-201ENST00000623780 2050 ntBASIC4.36□□□□□ -1.71
HERVK_113P62684 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
HERVK_113P62684 AC121333.1-201ENST00000567488 2709 ntBASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 107.1 ms