Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 RNU6-1287P-201ENST00000362914 107 ntBASIC3.27□□□□□ -1.89
CDH12P55289 RNU6-288P-201ENST00000363690 104 ntBASIC3.27□□□□□ -1.89
CDH12P55289 SNORA51.2-201ENST00000364595 132 ntBASIC3.27□□□□□ -1.89
CDH12P55289 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC3.27□□□□□ -1.89
CDH12P55289 RNU6-190P-201ENST00000384154 102 ntBASIC3.27□□□□□ -1.89
CDH12P55289 RNU6-1060P-201ENST00000384664 107 ntBASIC3.27□□□□□ -1.89
CDH12P55289 RNU6-373P-201ENST00000411247 98 ntBASIC3.27□□□□□ -1.89
CDH12P55289 RNU6-387P-201ENST00000411331 105 ntBASIC3.27□□□□□ -1.89
CDH12P55289 AL513331.1-201ENST00000411908 397 ntBASIC3.27□□□□□ -1.89
CDH12P55289 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CDH12P55289 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC3.27□□□□□ -1.89
CDH12P55289 RPL31P12-201ENST00000422587 358 ntBASIC3.27□□□□□ -1.89
CDH12P55289 RPL7P2-201ENST00000427639 268 ntBASIC3.27□□□□□ -1.89
CDH12P55289 BX679664.1-201ENST00000434429 253 ntBASIC3.27□□□□□ -1.89
CDH12P55289 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC3.27□□□□□ -1.89
CDH12P55289 USP9YP8-201ENST00000441913 500 ntBASIC3.27□□□□□ -1.89
CDH12P55289 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.27□□□□□ -1.89
CDH12P55289 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CDH12P55289 RPS4XP2-201ENST00000458402 793 ntBASIC3.27□□□□□ -1.89
CDH12P55289 RPL23AP62-201ENST00000463396 453 ntBASIC3.27□□□□□ -1.89
CDH12P55289 RPL23AP14-201ENST00000468281 468 ntBASIC3.27□□□□□ -1.89
CDH12P55289 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC3.27□□□□□ -1.89
CDH12P55289 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC3.27□□□□□ -1.89
CDH12P55289 AC114786.4-201ENST00000508771 728 ntBASIC3.27□□□□□ -1.89
CDH12P55289 AC023141.12-201ENST00000512399 199 ntBASIC3.27□□□□□ -1.89
CDH12P55289 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CDH12P55289 IGKV2-23-201ENST00000518729 323 ntBASIC3.27□□□□□ -1.89
CDH12P55289 OR5D17P-201ENST00000531492 978 ntBASIC3.27□□□□□ -1.89
CDH12P55289 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.27□□□□□ -1.89
CDH12P55289 MIR3690-201ENST00000580266 75 ntBASIC3.27□□□□□ -1.89
CDH12P55289 AC174048.1-201ENST00000603389 144 ntBASIC3.27□□□□□ -1.89
CDH12P55289 AL158032.1-201ENST00000605401 106 ntBASIC3.27□□□□□ -1.89
CDH12P55289 AC009994.1-201ENST00000606889 253 ntBASIC3.27□□□□□ -1.89
CDH12P55289 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC3.27□□□□□ -1.89
CDH12P55289 uc_338.11-201ENST00000619132 160 ntBASIC3.27□□□□□ -1.89
CDH12P55289 MTND5P42-201ENST00000637720 498 ntBASIC3.27□□□□□ -1.89
CDH12P55289 AC100810.6-201ENST00000638068 285 ntBASIC3.27□□□□□ -1.89
CDH12P55289 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.27□□□□□ -1.89
CDH12P55289 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CDH12P55289 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.27□□□□□ -1.89
CDH12P55289 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.27□□□□□ -1.89
CDH12P55289 AC103710.2-202ENST00000641454 2853 ntBASIC3.26□□□□□ -1.89
CDH12P55289 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CDH12P55289 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC3.26□□□□□ -1.89
CDH12P55289 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CDH12P55289 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
CDH12P55289 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
CDH12P55289 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC3.26□□□□□ -1.89
CDH12P55289 Y_RNA.157-201ENST00000363638 102 ntBASIC3.26□□□□□ -1.89
CDH12P55289 Y_RNA.231-201ENST00000364358 102 ntBASIC3.26□□□□□ -1.89
CDH12P55289 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CDH12P55289 RNU6-817P-201ENST00000391083 104 ntBASIC3.26□□□□□ -1.89
CDH12P55289 AL606923.1-201ENST00000406616 190 ntBASIC3.26□□□□□ -1.89
CDH12P55289 OR6C66P-201ENST00000414917 930 ntBASIC3.26□□□□□ -1.89
CDH12P55289 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.26□□□□□ -1.89
CDH12P55289 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC3.26□□□□□ -1.89
CDH12P55289 AC098614.3-201ENST00000438957 440 ntBASIC3.26□□□□□ -1.89
CDH12P55289 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC3.26□□□□□ -1.89
CDH12P55289 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.26□□□□□ -1.89
CDH12P55289 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC3.26□□□□□ -1.89
CDH12P55289 PMCHL2-203ENST00000457791 237 ntBASIC3.26□□□□□ -1.89
CDH12P55289 SNRPFP3-201ENST00000457792 225 ntBASIC3.26□□□□□ -1.89
CDH12P55289 HMGN2P26-201ENST00000463169 339 ntBASIC3.26□□□□□ -1.89
CDH12P55289 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC3.26□□□□□ -1.89
CDH12P55289 HMGN1P12-201ENST00000499125 195 ntBASIC3.26□□□□□ -1.89
CDH12P55289 AC091951.2-201ENST00000500762 203 ntBASIC3.26□□□□□ -1.89
CDH12P55289 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CDH12P55289 CCDC34P1-201ENST00000507441 517 ntBASIC3.26□□□□□ -1.89
CDH12P55289 AL359273.1-201ENST00000510918 627 ntBASIC3.26□□□□□ -1.89
CDH12P55289 RNU6-927P-201ENST00000516199 100 ntBASIC3.26□□□□□ -1.89
CDH12P55289 SCARNA15.2-201ENST00000516409 127 ntBASIC3.26□□□□□ -1.89
CDH12P55289 SNORA70.19-201ENST00000516717 90 ntBASIC3.26□□□□□ -1.89
CDH12P55289 RN7SKP289-201ENST00000517244 295 ntBASIC3.26□□□□□ -1.89
CDH12P55289 RANP3-201ENST00000530970 276 ntBASIC3.26□□□□□ -1.89
CDH12P55289 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC3.26□□□□□ -1.89
CDH12P55289 AP004242.1-201ENST00000533701 349 ntBASIC3.26□□□□□ -1.89
CDH12P55289 AC023050.3-201ENST00000541142 333 ntBASIC3.26□□□□□ -1.89
CDH12P55289 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC3.26□□□□□ -1.89
CDH12P55289 AC078814.3-201ENST00000553036 491 ntBASIC3.26□□□□□ -1.89
CDH12P55289 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC3.26□□□□□ -1.89
CDH12P55289 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.26□□□□□ -1.89
CDH12P55289 MIR3921-201ENST00000577308 85 ntBASIC3.26□□□□□ -1.89
CDH12P55289 AC018638.8-201ENST00000588755 281 ntBASIC3.26□□□□□ -1.89
CDH12P55289 RNU6-89P-201ENST00000606519 100 ntBASIC3.26□□□□□ -1.89
CDH12P55289 AL357078.3-201ENST00000607528 618 ntBASIC3.26□□□□□ -1.89
CDH12P55289 AC090132.2-201ENST00000615881 347 ntBASIC3.26□□□□□ -1.89
CDH12P55289 AC104260.1-201ENST00000616660 539 ntBASIC3.26□□□□□ -1.89
CDH12P55289 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC3.26□□□□□ -1.89
CDH12P55289 AC090617.10-201ENST00000624308 134 ntBASIC3.26□□□□□ -1.89
CDH12P55289 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
CDH12P55289 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CDH12P55289 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CDH12P55289 TPTE2P4-201ENST00000258589 1605 ntBASIC3.26□□□□□ -1.89
CDH12P55289 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
CDH12P55289 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
CDH12P55289 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
CDH12P55289 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
CDH12P55289 RNU4-66P-201ENST00000365199 138 ntBASIC3.25□□□□□ -1.89
CDH12P55289 RNU6-116P-201ENST00000384042 109 ntBASIC3.25□□□□□ -1.89
CDH12P55289 U8.11-201ENST00000384699 133 ntBASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms