Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 AC006445.2-201ENST00000510061 472 ntBASIC3.84□□□□□ -1.79
TM4SF4P48230 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC3.84□□□□□ -1.79
TM4SF4P48230 AC008885.1-201ENST00000514930 301 ntBASIC3.84□□□□□ -1.79
TM4SF4P48230 RNA5SP356-201ENST00000515972 94 ntBASIC3.84□□□□□ -1.79
TM4SF4P48230 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.84□□□□□ -1.79
TM4SF4P48230 CASP1P1-201ENST00000526345 212 ntBASIC3.84□□□□□ -1.79
TM4SF4P48230 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.84□□□□□ -1.79
TM4SF4P48230 DEFB131E-202ENST00000602581 683 ntBASIC3.84□□□□□ -1.79
TM4SF4P48230 AC146944.4-201ENST00000602697 718 ntBASIC3.84□□□□□ -1.79
TM4SF4P48230 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.84□□□□□ -1.79
TM4SF4P48230 AC073308.1-201ENST00000623696 305 ntBASIC3.84□□□□□ -1.79
TM4SF4P48230 AC005609.4-201ENST00000625071 447 ntBASIC3.84□□□□□ -1.79
TM4SF4P48230 VPS8-228ENST00000628962 207 ntTSL 5 BASIC3.84□□□□□ -1.79
TM4SF4P48230 SRP54-214ENST00000630962 162 ntTSL 5 BASIC3.84□□□□□ -1.79
TM4SF4P48230 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC3.84□□□□□ -1.79
TM4SF4P48230 API5P2-201ENST00000397055 1498 ntBASIC3.84□□□□□ -1.8
TM4SF4P48230 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.84□□□□□ -1.8
TM4SF4P48230 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC3.84□□□□□ -1.8
TM4SF4P48230 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.84□□□□□ -1.8
TM4SF4P48230 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
TM4SF4P48230 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.83□□□□□ -1.8
TM4SF4P48230 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
TM4SF4P48230 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
TM4SF4P48230 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
TM4SF4P48230 RNA5SP52-201ENST00000362448 134 ntBASIC3.83□□□□□ -1.8
TM4SF4P48230 RNA5SP197-201ENST00000363357 119 ntBASIC3.83□□□□□ -1.8
TM4SF4P48230 RNU6-1085P-201ENST00000363576 107 ntBASIC3.83□□□□□ -1.8
TM4SF4P48230 Y_RNA.505-201ENST00000384489 102 ntBASIC3.83□□□□□ -1.8
TM4SF4P48230 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
TM4SF4P48230 AL445529.1-201ENST00000398713 389 ntBASIC3.83□□□□□ -1.8
TM4SF4P48230 RNU6ATAC16P-201ENST00000408591 138 ntBASIC3.83□□□□□ -1.8
TM4SF4P48230 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
TM4SF4P48230 AF274854.1-201ENST00000413236 615 ntBASIC3.83□□□□□ -1.8
TM4SF4P48230 USP9YP6-201ENST00000413550 854 ntBASIC3.83□□□□□ -1.8
TM4SF4P48230 ZNF885P-201ENST00000420174 1098 ntBASIC3.83□□□□□ -1.8
TM4SF4P48230 AL109913.1-201ENST00000421173 514 ntBASIC3.83□□□□□ -1.8
TM4SF4P48230 AL139281.1-201ENST00000422120 335 ntBASIC3.83□□□□□ -1.8
TM4SF4P48230 ISCA1P1-201ENST00000426679 387 ntBASIC3.83□□□□□ -1.8
TM4SF4P48230 GPM6BP2-201ENST00000432046 144 ntBASIC3.83□□□□□ -1.8
TM4SF4P48230 MTATP6P16-201ENST00000434543 526 ntBASIC3.83□□□□□ -1.8
TM4SF4P48230 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC3.83□□□□□ -1.8
TM4SF4P48230 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.83□□□□□ -1.8
TM4SF4P48230 GPM6BP1-201ENST00000446387 144 ntBASIC3.83□□□□□ -1.8
TM4SF4P48230 RPL23AP20-201ENST00000447965 421 ntBASIC3.83□□□□□ -1.8
TM4SF4P48230 TRBV1-201ENST00000476502 284 ntBASIC3.83□□□□□ -1.8
TM4SF4P48230 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC3.83□□□□□ -1.8
TM4SF4P48230 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC3.83□□□□□ -1.8
TM4SF4P48230 RNA5SP503-201ENST00000517047 117 ntBASIC3.83□□□□□ -1.8
TM4SF4P48230 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC3.83□□□□□ -1.8
TM4SF4P48230 MIR3609-201ENST00000582661 80 ntBASIC3.83□□□□□ -1.8
TM4SF4P48230 AC098826.3-201ENST00000603823 466 ntBASIC3.83□□□□□ -1.8
TM4SF4P48230 AC136601.2-201ENST00000604356 474 ntBASIC3.83□□□□□ -1.8
TM4SF4P48230 uc_338.11-201ENST00000619132 160 ntBASIC3.83□□□□□ -1.8
TM4SF4P48230 AL356321.1-201ENST00000621360 228 ntBASIC3.83□□□□□ -1.8
TM4SF4P48230 AC139792.3-201ENST00000623525 224 ntBASIC3.83□□□□□ -1.8
TM4SF4P48230 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC3.83□□□□□ -1.8
TM4SF4P48230 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
TM4SF4P48230 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.83□□□□□ -1.8
TM4SF4P48230 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.83□□□□□ -1.8
TM4SF4P48230 RIOK3P1-201ENST00000418778 1528 ntBASIC3.83□□□□□ -1.8
TM4SF4P48230 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
TM4SF4P48230 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
TM4SF4P48230 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC3.83□□□□□ -1.8
TM4SF4P48230 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
TM4SF4P48230 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
TM4SF4P48230 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
TM4SF4P48230 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.82□□□□□ -1.8
TM4SF4P48230 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
TM4SF4P48230 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
TM4SF4P48230 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
TM4SF4P48230 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC3.82□□□□□ -1.8
TM4SF4P48230 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
TM4SF4P48230 MIR448-201ENST00000362131 111 ntBASIC3.82□□□□□ -1.8
TM4SF4P48230 Y_RNA.41-201ENST00000362646 102 ntBASIC3.82□□□□□ -1.8
TM4SF4P48230 RNU6-74P-201ENST00000384235 107 ntBASIC3.82□□□□□ -1.8
TM4SF4P48230 SNORA24.1-201ENST00000384401 135 ntBASIC3.82□□□□□ -1.8
TM4SF4P48230 RNU6-606P-201ENST00000384721 111 ntBASIC3.82□□□□□ -1.8
TM4SF4P48230 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
TM4SF4P48230 RNU6-648P-201ENST00000410190 107 ntBASIC3.82□□□□□ -1.8
TM4SF4P48230 RNA5SP111-201ENST00000411386 101 ntBASIC3.82□□□□□ -1.8
TM4SF4P48230 RPS12P24-201ENST00000412619 387 ntBASIC3.82□□□□□ -1.8
TM4SF4P48230 AL109914.1-201ENST00000414740 146 ntTSL 5 BASIC3.82□□□□□ -1.8
TM4SF4P48230 OR51A5P-201ENST00000415429 942 ntBASIC3.82□□□□□ -1.8
TM4SF4P48230 SDCBPP3-201ENST00000419629 891 ntBASIC3.82□□□□□ -1.8
TM4SF4P48230 RNU7-63P-201ENST00000459054 62 ntBASIC3.82□□□□□ -1.8
TM4SF4P48230 MRPS17P3-201ENST00000465453 385 ntBASIC3.82□□□□□ -1.8
TM4SF4P48230 AC006512.1-201ENST00000468816 291 ntBASIC3.82□□□□□ -1.8
TM4SF4P48230 RPL39P36-201ENST00000490784 156 ntBASIC3.82□□□□□ -1.8
TM4SF4P48230 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC3.82□□□□□ -1.8
TM4SF4P48230 SNORD27.1-201ENST00000516319 72 ntBASIC3.82□□□□□ -1.8
TM4SF4P48230 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC3.82□□□□□ -1.8
TM4SF4P48230 AL163153.1-201ENST00000554223 283 ntBASIC3.82□□□□□ -1.8
TM4SF4P48230 AC005476.1-201ENST00000554427 397 ntBASIC3.82□□□□□ -1.8
TM4SF4P48230 H3F3AP1-201ENST00000559984 334 ntBASIC3.82□□□□□ -1.8
TM4SF4P48230 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC3.82□□□□□ -1.8
TM4SF4P48230 MIR4474-201ENST00000579189 78 ntBASIC3.82□□□□□ -1.8
TM4SF4P48230 KLKP1-201ENST00000595979 403 ntBASIC3.82□□□□□ -1.8
TM4SF4P48230 BRDTP1-201ENST00000605735 677 ntBASIC3.82□□□□□ -1.8
TM4SF4P48230 AC012409.4-201ENST00000612923 249 ntBASIC3.82□□□□□ -1.8
TM4SF4P48230 U4.5-201ENST00000617137 123 ntBASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 118.8 ms