Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 AP000790.1-201ENST00000528891 737 ntBASIC3.03□□□□□ -1.92
COL2A1P02458 AL133271.1-201ENST00000538229 291 ntBASIC3.03□□□□□ -1.92
COL2A1P02458 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC3.03□□□□□ -1.92
COL2A1P02458 AL391840.1-201ENST00000571144 367 ntBASIC3.03□□□□□ -1.92
COL2A1P02458 AL121655.1-201ENST00000605811 308 ntBASIC3.03□□□□□ -1.92
COL2A1P02458 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC3.03□□□□□ -1.92
COL2A1P02458 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC3.03□□□□□ -1.92
COL2A1P02458 AC104010.1-201ENST00000616889 150 ntBASIC3.03□□□□□ -1.92
COL2A1P02458 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC3.03□□□□□ -1.92
COL2A1P02458 AC025034.2-201ENST00000623264 286 ntBASIC3.03□□□□□ -1.92
COL2A1P02458 FRG1KP-201ENST00000623592 341 ntBASIC3.03□□□□□ -1.92
COL2A1P02458 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
COL2A1P02458 MKKS-204ENST00000639674 192 ntBASIC3.03□□□□□ -1.92
COL2A1P02458 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.92
COL2A1P02458 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC3.03□□□□□ -1.92
COL2A1P02458 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
COL2A1P02458 RLIMP2-201ENST00000427891 1563 ntBASIC3.03□□□□□ -1.92
COL2A1P02458 AC138915.3-201ENST00000562908 1389 ntBASIC3.03□□□□□ -1.92
COL2A1P02458 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC3.03□□□□□ -1.92
COL2A1P02458 CDR1-202ENST00000625883 1485 ntBASIC3.03□□□□□ -1.92
COL2A1P02458 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.93
COL2A1P02458 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.93
COL2A1P02458 Y_RNA.86-201ENST00000363020 111 ntBASIC3.03□□□□□ -1.93
COL2A1P02458 Y_RNA.132-201ENST00000363421 102 ntBASIC3.03□□□□□ -1.93
COL2A1P02458 Y_RNA.162-201ENST00000363683 102 ntBASIC3.03□□□□□ -1.93
COL2A1P02458 SNORA62.2-201ENST00000364672 152 ntBASIC3.03□□□□□ -1.93
COL2A1P02458 RNU6-332P-201ENST00000391193 108 ntBASIC3.03□□□□□ -1.93
COL2A1P02458 RNA5SP425-201ENST00000410336 112 ntBASIC3.03□□□□□ -1.93
COL2A1P02458 AC080125.1-201ENST00000414888 684 ntBASIC3.03□□□□□ -1.93
COL2A1P02458 SDCBPP3-201ENST00000419629 891 ntBASIC3.03□□□□□ -1.93
COL2A1P02458 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC3.03□□□□□ -1.93
COL2A1P02458 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC3.03□□□□□ -1.93
COL2A1P02458 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC3.03□□□□□ -1.93
COL2A1P02458 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC3.03□□□□□ -1.93
COL2A1P02458 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC3.03□□□□□ -1.93
COL2A1P02458 AC104850.1-201ENST00000435940 476 ntBASIC3.03□□□□□ -1.93
COL2A1P02458 MTCO3P18-201ENST00000440206 761 ntBASIC3.03□□□□□ -1.93
COL2A1P02458 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC3.03□□□□□ -1.93
COL2A1P02458 MTCO1P42-201ENST00000457379 726 ntBASIC3.03□□□□□ -1.93
COL2A1P02458 RPS27P23-201ENST00000487608 251 ntBASIC3.03□□□□□ -1.93
COL2A1P02458 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC3.03□□□□□ -1.93
COL2A1P02458 SNORA48.10-201ENST00000516965 160 ntBASIC3.03□□□□□ -1.93
COL2A1P02458 MTCO2P4-201ENST00000517968 247 ntBASIC3.03□□□□□ -1.93
COL2A1P02458 AC093027.1-201ENST00000546698 429 ntBASIC3.03□□□□□ -1.93
COL2A1P02458 AC008083.2-201ENST00000546707 476 ntBASIC3.03□□□□□ -1.93
COL2A1P02458 HMGB1P33-201ENST00000563485 527 ntBASIC3.03□□□□□ -1.93
COL2A1P02458 AC107954.1-201ENST00000565906 727 ntBASIC3.03□□□□□ -1.93
COL2A1P02458 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC3.03□□□□□ -1.93
COL2A1P02458 AC034268.2-201ENST00000571784 482 ntBASIC3.03□□□□□ -1.93
COL2A1P02458 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC3.03□□□□□ -1.93
COL2A1P02458 RNU6-88P-201ENST00000606801 100 ntBASIC3.03□□□□□ -1.93
COL2A1P02458 AP001506.1-201ENST00000615444 211 ntBASIC3.03□□□□□ -1.93
COL2A1P02458 WARS-244ENST00000627608 123 ntTSL 5 BASIC3.03□□□□□ -1.93
COL2A1P02458 SRP54-214ENST00000630962 162 ntTSL 5 BASIC3.03□□□□□ -1.93
COL2A1P02458 RNF6P1-201ENST00000444889 1784 ntBASIC3.02□□□□□ -1.93
COL2A1P02458 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
COL2A1P02458 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.02□□□□□ -1.93
COL2A1P02458 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
COL2A1P02458 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
COL2A1P02458 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.02□□□□□ -1.93
COL2A1P02458 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
COL2A1P02458 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
COL2A1P02458 RNU6-619P-201ENST00000365146 108 ntBASIC3.02□□□□□ -1.93
COL2A1P02458 MIR181B1-201ENST00000385240 110 ntBASIC3.02□□□□□ -1.93
COL2A1P02458 SNRPEP2-201ENST00000397592 279 ntBASIC3.02□□□□□ -1.93
COL2A1P02458 AL121972.1-201ENST00000402023 252 ntBASIC3.02□□□□□ -1.93
COL2A1P02458 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
COL2A1P02458 AL590004.2-201ENST00000404787 371 ntBASIC3.02□□□□□ -1.93
COL2A1P02458 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC3.02□□□□□ -1.93
COL2A1P02458 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC3.02□□□□□ -1.93
COL2A1P02458 LINC00407-201ENST00000426509 295 ntTSL 5 BASIC3.02□□□□□ -1.93
COL2A1P02458 SDCBPP1-201ENST00000440192 890 ntBASIC3.02□□□□□ -1.93
COL2A1P02458 AC011816.1-201ENST00000441346 546 ntBASIC3.02□□□□□ -1.93
COL2A1P02458 MEMO1P3-201ENST00000459811 302 ntBASIC3.02□□□□□ -1.93
COL2A1P02458 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC3.02□□□□□ -1.93
COL2A1P02458 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC3.02□□□□□ -1.93
COL2A1P02458 RN7SKP24-201ENST00000515888 284 ntBASIC3.02□□□□□ -1.93
COL2A1P02458 RNU6-1261P-201ENST00000517194 104 ntBASIC3.02□□□□□ -1.93
COL2A1P02458 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.02□□□□□ -1.93
COL2A1P02458 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC3.02□□□□□ -1.93
COL2A1P02458 AF235103.2-201ENST00000525753 346 ntBASIC3.02□□□□□ -1.93
COL2A1P02458 AC022690.1-201ENST00000526681 550 ntBASIC3.02□□□□□ -1.93
COL2A1P02458 AP001893.2-201ENST00000526949 202 ntBASIC3.02□□□□□ -1.93
COL2A1P02458 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC3.02□□□□□ -1.93
COL2A1P02458 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC3.02□□□□□ -1.93
COL2A1P02458 AC025678.1-201ENST00000567861 338 ntBASIC3.02□□□□□ -1.93
COL2A1P02458 AC112191.3-201ENST00000604371 277 ntBASIC3.02□□□□□ -1.93
COL2A1P02458 AC010680.4-201ENST00000605334 543 ntBASIC3.02□□□□□ -1.93
COL2A1P02458 AC103710.1-201ENST00000610003 901 ntBASIC3.02□□□□□ -1.93
COL2A1P02458 PART1_1.1-201ENST00000611761 217 ntBASIC3.02□□□□□ -1.93
COL2A1P02458 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC3.02□□□□□ -1.93
COL2A1P02458 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC3.02□□□□□ -1.93
COL2A1P02458 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
COL2A1P02458 AC136475.10-201ENST00000620253 385 ntBASIC3.02□□□□□ -1.93
COL2A1P02458 U4.3-201ENST00000621047 82 ntBASIC3.02□□□□□ -1.93
COL2A1P02458 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
COL2A1P02458 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
COL2A1P02458 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
COL2A1P02458 CCT4P2-201ENST00000233836 1548 ntBASIC3.01□□□□□ -1.93
COL2A1P02458 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC3.01□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 93.2 ms