Protein–RNA interactions for Protein: O75127

PTCD1, Pentatricopeptide repeat-containing protein 1, mitochondrial, humanhuman

Known RBP Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1O75127 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.45□□□□□ -1.54
PTCD1O75127 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC5.45□□□□□ -1.54
PTCD1O75127 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC5.45□□□□□ -1.54
PTCD1O75127 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
PTCD1O75127 AC091812.1-201ENST00000432235 1948 ntBASIC5.44□□□□□ -1.54
PTCD1O75127 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
PTCD1O75127 AC093849.1-201ENST00000563631 2209 ntBASIC5.44□□□□□ -1.54
PTCD1O75127 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
PTCD1O75127 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
PTCD1O75127 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
PTCD1O75127 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
PTCD1O75127 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC5.44□□□□□ -1.54
PTCD1O75127 Y_RNA.480-201ENST00000384364 102 ntBASIC5.44□□□□□ -1.54
PTCD1O75127 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
PTCD1O75127 SNORA68.2-201ENST00000391263 128 ntBASIC5.44□□□□□ -1.54
PTCD1O75127 PTMAP2-201ENST00000397627 327 ntBASIC5.44□□□□□ -1.54
PTCD1O75127 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC5.44□□□□□ -1.54
PTCD1O75127 RN7SKP167-201ENST00000411047 285 ntBASIC5.44□□□□□ -1.54
PTCD1O75127 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC5.44□□□□□ -1.54
PTCD1O75127 EIF4EP1-201ENST00000422311 642 ntBASIC5.44□□□□□ -1.54
PTCD1O75127 AC006946.1-201ENST00000429106 328 ntBASIC5.44□□□□□ -1.54
PTCD1O75127 AL445584.1-201ENST00000431451 330 ntBASIC5.44□□□□□ -1.54
PTCD1O75127 AL358232.1-201ENST00000448030 501 ntBASIC5.44□□□□□ -1.54
PTCD1O75127 RNU7-138P-201ENST00000459479 64 ntBASIC5.44□□□□□ -1.54
PTCD1O75127 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC5.44□□□□□ -1.54
PTCD1O75127 SNORA31.3-201ENST00000516029 96 ntBASIC5.44□□□□□ -1.54
PTCD1O75127 RNU6-307P-201ENST00000516743 106 ntBASIC5.44□□□□□ -1.54
PTCD1O75127 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC5.44□□□□□ -1.54
PTCD1O75127 RRN3P3-201ENST00000549207 578 ntBASIC5.44□□□□□ -1.54
PTCD1O75127 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC5.44□□□□□ -1.54
PTCD1O75127 AL606490.9-201ENST00000603331 271 ntBASIC5.44□□□□□ -1.54
PTCD1O75127 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC5.44□□□□□ -1.54
PTCD1O75127 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC5.44□□□□□ -1.54
PTCD1O75127 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
PTCD1O75127 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
PTCD1O75127 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.43□□□□□ -1.54
PTCD1O75127 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
PTCD1O75127 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
PTCD1O75127 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
PTCD1O75127 ASNSP1-201ENST00000518311 1939 ntBASIC5.43□□□□□ -1.54
PTCD1O75127 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
PTCD1O75127 RNU6-371P-201ENST00000364283 108 ntBASIC5.43□□□□□ -1.54
PTCD1O75127 MT-TW-201ENST00000387382 68 ntBASIC5.43□□□□□ -1.54
PTCD1O75127 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
PTCD1O75127 MIR548I2-201ENST00000408348 149 ntBASIC5.43□□□□□ -1.54
PTCD1O75127 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC5.43□□□□□ -1.54
PTCD1O75127 MTND5P15-201ENST00000434246 349 ntBASIC5.43□□□□□ -1.54
PTCD1O75127 DYNLT3P2-201ENST00000442517 295 ntBASIC5.43□□□□□ -1.54
PTCD1O75127 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC5.43□□□□□ -1.54
PTCD1O75127 RNU7-187P-201ENST00000458985 68 ntBASIC5.43□□□□□ -1.54
PTCD1O75127 RNU6-1132P-201ENST00000459214 107 ntBASIC5.43□□□□□ -1.54
PTCD1O75127 snoU13.22-201ENST00000459428 104 ntBASIC5.43□□□□□ -1.54
PTCD1O75127 RPS29P19-201ENST00000479709 171 ntBASIC5.43□□□□□ -1.54
PTCD1O75127 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC5.43□□□□□ -1.54
PTCD1O75127 RNU6-914P-201ENST00000516749 109 ntBASIC5.43□□□□□ -1.54
PTCD1O75127 AC069113.1-201ENST00000517763 267 ntBASIC5.43□□□□□ -1.54
PTCD1O75127 IFITM8P-201ENST00000522529 394 ntBASIC5.43□□□□□ -1.54
PTCD1O75127 AL121603.1-201ENST00000553815 142 ntBASIC5.43□□□□□ -1.54
PTCD1O75127 AC022655.2-201ENST00000577280 318 ntBASIC5.43□□□□□ -1.54
PTCD1O75127 BDH2P1-201ENST00000602288 736 ntBASIC5.43□□□□□ -1.54
PTCD1O75127 AC092447.9-201ENST00000603395 144 ntBASIC5.43□□□□□ -1.54
PTCD1O75127 ELOCP5-201ENST00000604924 333 ntBASIC5.43□□□□□ -1.54
PTCD1O75127 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC5.43□□□□□ -1.54
PTCD1O75127 AC039056.2-201ENST00000622261 511 ntBASIC5.43□□□□□ -1.54
PTCD1O75127 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC5.43□□□□□ -1.54
PTCD1O75127 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
PTCD1O75127 AC005592.1-201ENST00000566527 1640 ntBASIC5.43□□□□□ -1.54
PTCD1O75127 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
PTCD1O75127 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
PTCD1O75127 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
PTCD1O75127 ZNF285B-201ENST00000561698 1767 ntBASIC5.42□□□□□ -1.54
PTCD1O75127 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC5.42□□□□□ -1.54
PTCD1O75127 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
PTCD1O75127 Y_RNA.350-201ENST00000365409 98 ntBASIC5.42□□□□□ -1.54
PTCD1O75127 RNU6-823P-201ENST00000391042 103 ntBASIC5.42□□□□□ -1.54
PTCD1O75127 AL445529.1-201ENST00000398713 389 ntBASIC5.42□□□□□ -1.54
PTCD1O75127 MIR1911-201ENST00000410783 80 ntBASIC5.42□□□□□ -1.54
PTCD1O75127 UBE2V1P4-201ENST00000425374 344 ntBASIC5.42□□□□□ -1.54
PTCD1O75127 GOT2P5-201ENST00000433995 546 ntBASIC5.42□□□□□ -1.54
PTCD1O75127 AC007389.2-201ENST00000434630 306 ntBASIC5.42□□□□□ -1.54
PTCD1O75127 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC5.42□□□□□ -1.54
PTCD1O75127 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC5.42□□□□□ -1.54
PTCD1O75127 RNA5SP246-201ENST00000458909 119 ntBASIC5.42□□□□□ -1.54
PTCD1O75127 RPL23AP2-201ENST00000471227 466 ntBASIC5.42□□□□□ -1.54
PTCD1O75127 RPL31P60-201ENST00000478450 367 ntBASIC5.42□□□□□ -1.54
PTCD1O75127 RNU6-138P-201ENST00000515952 107 ntBASIC5.42□□□□□ -1.54
PTCD1O75127 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
PTCD1O75127 AC104576.1-201ENST00000524225 88 ntBASIC5.42□□□□□ -1.54
PTCD1O75127 AC078899.3-201ENST00000599065 212 ntBASIC5.42□□□□□ -1.54
PTCD1O75127 AC024220.1-201ENST00000603675 484 ntBASIC5.42□□□□□ -1.54
PTCD1O75127 RNU6-85P-201ENST00000605989 107 ntBASIC5.42□□□□□ -1.54
PTCD1O75127 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
PTCD1O75127 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC5.41□□□□□ -1.54
PTCD1O75127 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
PTCD1O75127 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC5.41□□□□□ -1.54
PTCD1O75127 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC5.41□□□□□ -1.54
PTCD1O75127 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
PTCD1O75127 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC5.41□□□□□ -1.54
PTCD1O75127 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
PTCD1O75127 SNORA71.3-201ENST00000362582 128 ntBASIC5.41□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 109.8 ms