Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
HOXA2O43364 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
HOXA2O43364 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
HOXA2O43364 DEFB108F-201ENST00000344638 222 ntBASIC5.6□□□□□ -1.51
HOXA2O43364 SNORD115-32-201ENST00000364079 82 ntBASIC5.6□□□□□ -1.51
HOXA2O43364 Y_RNA.418-201ENST00000384029 102 ntBASIC5.6□□□□□ -1.51
HOXA2O43364 RNA5SP87-201ENST00000384155 118 ntBASIC5.6□□□□□ -1.51
HOXA2O43364 RNU6-166P-201ENST00000384371 107 ntBASIC5.6□□□□□ -1.51
HOXA2O43364 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
HOXA2O43364 RNU1-139P-201ENST00000391307 165 ntBASIC5.6□□□□□ -1.51
HOXA2O43364 RNU6-735P-201ENST00000410612 107 ntBASIC5.6□□□□□ -1.51
HOXA2O43364 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC5.6□□□□□ -1.51
HOXA2O43364 IGKV1OR9-2-201ENST00000431378 277 ntBASIC5.6□□□□□ -1.51
HOXA2O43364 AL078601.1-201ENST00000444542 271 ntBASIC5.6□□□□□ -1.51
HOXA2O43364 AC009963.2-201ENST00000453431 138 ntBASIC5.6□□□□□ -1.51
HOXA2O43364 AP001025.1-201ENST00000486139 332 ntBASIC5.6□□□□□ -1.51
HOXA2O43364 RPL23AP75-201ENST00000491601 451 ntBASIC5.6□□□□□ -1.51
HOXA2O43364 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC5.6□□□□□ -1.51
HOXA2O43364 COX6B1P5-201ENST00000509843 249 ntBASIC5.6□□□□□ -1.51
HOXA2O43364 RNU6-1114P-201ENST00000516022 107 ntBASIC5.6□□□□□ -1.51
HOXA2O43364 SCARNA15.2-201ENST00000516409 127 ntBASIC5.6□□□□□ -1.51
HOXA2O43364 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC5.6□□□□□ -1.51
HOXA2O43364 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC5.6□□□□□ -1.51
HOXA2O43364 MIR4691-201ENST00000583764 85 ntBASIC5.6□□□□□ -1.51
HOXA2O43364 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC5.6□□□□□ -1.51
HOXA2O43364 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC5.6□□□□□ -1.51
HOXA2O43364 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.6□□□□□ -1.51
HOXA2O43364 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
HOXA2O43364 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC5.6□□□□□ -1.51
HOXA2O43364 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
HOXA2O43364 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.6□□□□□ -1.51
HOXA2O43364 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC5.59□□□□□ -1.51
HOXA2O43364 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
HOXA2O43364 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
HOXA2O43364 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
HOXA2O43364 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
HOXA2O43364 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.59□□□□□ -1.51
HOXA2O43364 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
HOXA2O43364 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC5.59□□□□□ -1.51
HOXA2O43364 DCN-218ENST00000551354 2924 ntTSL 3 BASIC5.59□□□□□ -1.51
HOXA2O43364 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC5.59□□□□□ -1.51
HOXA2O43364 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
HOXA2O43364 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC5.59□□□□□ -1.51
HOXA2O43364 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
HOXA2O43364 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.59□□□□□ -1.51
HOXA2O43364 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
HOXA2O43364 MIR410-201ENST00000362222 80 ntBASIC5.59□□□□□ -1.51
HOXA2O43364 RNU6-1289P-201ENST00000384431 106 ntBASIC5.59□□□□□ -1.51
HOXA2O43364 MIR153-2-201ENST00000385225 87 ntBASIC5.59□□□□□ -1.51
HOXA2O43364 RN7SKP17-201ENST00000411242 351 ntBASIC5.59□□□□□ -1.51
HOXA2O43364 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC5.59□□□□□ -1.51
HOXA2O43364 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC5.59□□□□□ -1.51
HOXA2O43364 TDGF1P1-201ENST00000445734 527 ntBASIC5.59□□□□□ -1.51
HOXA2O43364 NIP7P2-201ENST00000485801 544 ntBASIC5.59□□□□□ -1.51
HOXA2O43364 RPL30P1-201ENST00000488676 339 ntBASIC5.59□□□□□ -1.51
HOXA2O43364 AC140172.1-201ENST00000502928 141 ntBASIC5.59□□□□□ -1.51
HOXA2O43364 RNU6-1219P-201ENST00000516143 112 ntBASIC5.59□□□□□ -1.51
HOXA2O43364 SNORA27.4-201ENST00000516650 95 ntBASIC5.59□□□□□ -1.51
HOXA2O43364 AP005660.1-201ENST00000522972 293 ntBASIC5.59□□□□□ -1.51
HOXA2O43364 AC027369.5-201ENST00000533838 755 ntBASIC5.59□□□□□ -1.51
HOXA2O43364 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC5.59□□□□□ -1.51
HOXA2O43364 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC5.59□□□□□ -1.51
HOXA2O43364 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
HOXA2O43364 RPL23AP88-201ENST00000605759 454 ntBASIC5.59□□□□□ -1.51
HOXA2O43364 AC087385.3-201ENST00000620477 187 ntBASIC5.59□□□□□ -1.51
HOXA2O43364 AC027309.3-201ENST00000623419 351 ntBASIC5.59□□□□□ -1.51
HOXA2O43364 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
HOXA2O43364 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
HOXA2O43364 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
HOXA2O43364 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC5.59□□□□□ -1.51
HOXA2O43364 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC5.59□□□□□ -1.51
HOXA2O43364 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
HOXA2O43364 AC006206.1-201ENST00000544842 3387 ntBASIC5.59□□□□□ -1.51
HOXA2O43364 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.59□□□□□ -1.52
HOXA2O43364 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC5.59□□□□□ -1.52
HOXA2O43364 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
HOXA2O43364 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.59□□□□□ -1.52
HOXA2O43364 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
HOXA2O43364 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC5.58□□□□□ -1.52
HOXA2O43364 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
HOXA2O43364 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
HOXA2O43364 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
HOXA2O43364 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.58□□□□□ -1.52
HOXA2O43364 RNU6-78P-201ENST00000362897 107 ntBASIC5.58□□□□□ -1.52
HOXA2O43364 Y_RNA.308-201ENST00000365043 101 ntBASIC5.58□□□□□ -1.52
HOXA2O43364 Y_RNA.343-201ENST00000365354 112 ntBASIC5.58□□□□□ -1.52
HOXA2O43364 SNORA66-201ENST00000384792 133 ntBASIC5.58□□□□□ -1.52
HOXA2O43364 MIR32-201ENST00000384965 70 ntBASIC5.58□□□□□ -1.52
HOXA2O43364 RNU6-1154P-201ENST00000391001 104 ntBASIC5.58□□□□□ -1.52
HOXA2O43364 OR2AM1P-201ENST00000422137 422 ntBASIC5.58□□□□□ -1.52
HOXA2O43364 AC079780.1-201ENST00000428259 207 ntBASIC5.58□□□□□ -1.52
HOXA2O43364 AC011742.1-201ENST00000431448 434 ntBASIC5.58□□□□□ -1.52
HOXA2O43364 NDUFB4P8-201ENST00000435351 367 ntBASIC5.58□□□□□ -1.52
HOXA2O43364 AC092798.1-201ENST00000458542 409 ntBASIC5.58□□□□□ -1.52
HOXA2O43364 AC117440.1-201ENST00000474107 571 ntBASIC5.58□□□□□ -1.52
HOXA2O43364 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC5.58□□□□□ -1.52
HOXA2O43364 MLLT10P2-201ENST00000506434 249 ntBASIC5.58□□□□□ -1.52
HOXA2O43364 RNU6-572P-201ENST00000516724 80 ntBASIC5.58□□□□□ -1.52
HOXA2O43364 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC5.58□□□□□ -1.52
HOXA2O43364 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 111.4 ms