Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 RNA5SP446-201ENST00000515955 82 ntBASIC4.18□□□□□ -1.74
SHISA3A0PJX4 RN7SKP276-201ENST00000516242 268 ntBASIC4.18□□□□□ -1.74
SHISA3A0PJX4 RNA5SP291-201ENST00000517222 105 ntBASIC4.18□□□□□ -1.74
SHISA3A0PJX4 AC025755.1-201ENST00000521306 278 ntBASIC4.18□□□□□ -1.74
SHISA3A0PJX4 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
SHISA3A0PJX4 AL442163.3-201ENST00000554110 156 ntBASIC4.18□□□□□ -1.74
SHISA3A0PJX4 AC005476.1-201ENST00000554427 397 ntBASIC4.18□□□□□ -1.74
SHISA3A0PJX4 MED28P6-201ENST00000558776 231 ntBASIC4.18□□□□□ -1.74
SHISA3A0PJX4 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC4.18□□□□□ -1.74
SHISA3A0PJX4 AC104581.2-201ENST00000572227 430 ntBASIC4.18□□□□□ -1.74
SHISA3A0PJX4 MIR4489-201ENST00000578869 62 ntBASIC4.18□□□□□ -1.74
SHISA3A0PJX4 SNORA74C-1-201ENST00000580726 201 ntBASIC4.18□□□□□ -1.74
SHISA3A0PJX4 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.18□□□□□ -1.74
SHISA3A0PJX4 AC005046.1-201ENST00000608515 625 ntBASIC4.18□□□□□ -1.74
SHISA3A0PJX4 PSMD5-AS1-215ENST00000640622 205 ntBASIC4.18□□□□□ -1.74
SHISA3A0PJX4 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
SHISA3A0PJX4 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
SHISA3A0PJX4 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC4.18□□□□□ -1.74
SHISA3A0PJX4 AC092435.4-201ENST00000623012 4159 ntBASIC4.18□□□□□ -1.74
SHISA3A0PJX4 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
SHISA3A0PJX4 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
SHISA3A0PJX4 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
SHISA3A0PJX4 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
SHISA3A0PJX4 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC4.18□□□□□ -1.74
SHISA3A0PJX4 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
SHISA3A0PJX4 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
SHISA3A0PJX4 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.17□□□□□ -1.74
SHISA3A0PJX4 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
SHISA3A0PJX4 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC4.17□□□□□ -1.74
SHISA3A0PJX4 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
SHISA3A0PJX4 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
SHISA3A0PJX4 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
SHISA3A0PJX4 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC4.17□□□□□ -1.74
SHISA3A0PJX4 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.17□□□□□ -1.74
SHISA3A0PJX4 RNU6-227P-201ENST00000362865 103 ntBASIC4.17□□□□□ -1.74
SHISA3A0PJX4 RNA5SP151-201ENST00000365632 117 ntBASIC4.17□□□□□ -1.74
SHISA3A0PJX4 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC4.17□□□□□ -1.74
SHISA3A0PJX4 CYP4F29P-201ENST00000420685 446 ntBASIC4.17□□□□□ -1.74
SHISA3A0PJX4 AL355433.1-201ENST00000422804 300 ntBASIC4.17□□□□□ -1.74
SHISA3A0PJX4 AL645608.4-201ENST00000423619 154 ntBASIC4.17□□□□□ -1.74
SHISA3A0PJX4 RPL27AP8-201ENST00000424277 446 ntBASIC4.17□□□□□ -1.74
SHISA3A0PJX4 SDAD1P3-201ENST00000427380 333 ntBASIC4.17□□□□□ -1.74
SHISA3A0PJX4 C4BPAP2-201ENST00000428434 478 ntBASIC4.17□□□□□ -1.74
SHISA3A0PJX4 AL590383.1-201ENST00000428602 75 ntBASIC4.17□□□□□ -1.74
SHISA3A0PJX4 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4.17□□□□□ -1.74
SHISA3A0PJX4 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC4.17□□□□□ -1.74
SHISA3A0PJX4 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC4.17□□□□□ -1.74
SHISA3A0PJX4 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC4.17□□□□□ -1.74
SHISA3A0PJX4 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC4.17□□□□□ -1.74
SHISA3A0PJX4 RPS26P39-201ENST00000469206 341 ntBASIC4.17□□□□□ -1.74
SHISA3A0PJX4 AC010285.1-201ENST00000470580 392 ntBASIC4.17□□□□□ -1.74
SHISA3A0PJX4 RPS21P4-201ENST00000487122 248 ntBASIC4.17□□□□□ -1.74
SHISA3A0PJX4 HMGB3P17-201ENST00000504195 649 ntBASIC4.17□□□□□ -1.74
SHISA3A0PJX4 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC4.17□□□□□ -1.74
SHISA3A0PJX4 IGLV3-26-201ENST00000520756 302 ntBASIC4.17□□□□□ -1.74
SHISA3A0PJX4 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC4.17□□□□□ -1.74
SHISA3A0PJX4 RRN3P3-201ENST00000549207 578 ntBASIC4.17□□□□□ -1.74
SHISA3A0PJX4 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC4.17□□□□□ -1.74
SHISA3A0PJX4 AC007448.1-201ENST00000582714 234 ntBASIC4.17□□□□□ -1.74
SHISA3A0PJX4 AP002826.1-201ENST00000608835 315 ntBASIC4.17□□□□□ -1.74
SHISA3A0PJX4 AL512624.1-201ENST00000613638 469 ntBASIC4.17□□□□□ -1.74
SHISA3A0PJX4 AP001282.2-201ENST00000616149 309 ntBASIC4.17□□□□□ -1.74
SHISA3A0PJX4 AL591926.8-201ENST00000616876 211 ntBASIC4.17□□□□□ -1.74
SHISA3A0PJX4 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC4.17□□□□□ -1.74
SHISA3A0PJX4 AC019206.1-201ENST00000621938 425 ntBASIC4.17□□□□□ -1.74
SHISA3A0PJX4 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
SHISA3A0PJX4 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.17□□□□□ -1.74
SHISA3A0PJX4 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
SHISA3A0PJX4 AC068254.2-201ENST00000623938 3577 ntBASIC4.17□□□□□ -1.74
SHISA3A0PJX4 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
SHISA3A0PJX4 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
SHISA3A0PJX4 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
SHISA3A0PJX4 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
SHISA3A0PJX4 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
SHISA3A0PJX4 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
SHISA3A0PJX4 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
SHISA3A0PJX4 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
SHISA3A0PJX4 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
SHISA3A0PJX4 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC4.16□□□□□ -1.74
SHISA3A0PJX4 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
SHISA3A0PJX4 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
SHISA3A0PJX4 AC008079.2-201ENST00000623543 20396 ntBASIC4.16□□□□□ -1.74
SHISA3A0PJX4 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
SHISA3A0PJX4 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC4.16□□□□□ -1.74
SHISA3A0PJX4 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.16□□□□□ -1.74
SHISA3A0PJX4 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
SHISA3A0PJX4 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
SHISA3A0PJX4 Y_RNA.84-201ENST00000363011 104 ntBASIC4.16□□□□□ -1.74
SHISA3A0PJX4 U3.6-201ENST00000363622 211 ntBASIC4.16□□□□□ -1.74
SHISA3A0PJX4 RNA5SP28-201ENST00000363841 119 ntBASIC4.16□□□□□ -1.74
SHISA3A0PJX4 Y_RNA.458-201ENST00000384240 102 ntBASIC4.16□□□□□ -1.74
SHISA3A0PJX4 Y_RNA.555-201ENST00000384673 110 ntBASIC4.16□□□□□ -1.74
SHISA3A0PJX4 AC009804.1-201ENST00000400949 179 ntBASIC4.16□□□□□ -1.74
SHISA3A0PJX4 MIR190B-201ENST00000401119 79 ntBASIC4.16□□□□□ -1.74
SHISA3A0PJX4 MIR1286-201ENST00000408112 78 ntBASIC4.16□□□□□ -1.74
SHISA3A0PJX4 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.16□□□□□ -1.74
SHISA3A0PJX4 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC4.16□□□□□ -1.74
SHISA3A0PJX4 MTND3P9-201ENST00000429526 346 ntBASIC4.16□□□□□ -1.74
SHISA3A0PJX4 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC4.16□□□□□ -1.74
SHISA3A0PJX4 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC4.16□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms