Protein–RNA interactions for Protein: A0A0A0MS03

TRBV5-3, T-cell receptor beta variable 5-3 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-3A0A0A0MS03 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC3.35□□□□□ -1.87
TRBV5-3A0A0A0MS03 AC026402.1-201ENST00000513642 170 ntBASIC3.35□□□□□ -1.87
TRBV5-3A0A0A0MS03 Y_RNA.691-201ENST00000516611 103 ntBASIC3.35□□□□□ -1.87
TRBV5-3A0A0A0MS03 HPRT1P3-201ENST00000539521 576 ntBASIC3.35□□□□□ -1.87
TRBV5-3A0A0A0MS03 AP000763.2-201ENST00000540641 163 ntBASIC3.35□□□□□ -1.87
TRBV5-3A0A0A0MS03 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC3.35□□□□□ -1.87
TRBV5-3A0A0A0MS03 OR11H5P-201ENST00000554039 926 ntBASIC3.35□□□□□ -1.87
TRBV5-3A0A0A0MS03 AC106782.4-201ENST00000568264 210 ntBASIC3.35□□□□□ -1.87
TRBV5-3A0A0A0MS03 RN7SL703P-201ENST00000578485 302 ntBASIC3.35□□□□□ -1.87
TRBV5-3A0A0A0MS03 MIR4644-201ENST00000579929 84 ntBASIC3.35□□□□□ -1.87
TRBV5-3A0A0A0MS03 BNIP3P25-201ENST00000596023 559 ntBASIC3.35□□□□□ -1.87
TRBV5-3A0A0A0MS03 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.35□□□□□ -1.87
TRBV5-3A0A0A0MS03 AC112200.1-201ENST00000625015 234 ntBASIC3.35□□□□□ -1.87
TRBV5-3A0A0A0MS03 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.35□□□□□ -1.87
TRBV5-3A0A0A0MS03 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC3.35□□□□□ -1.87
TRBV5-3A0A0A0MS03 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.35□□□□□ -1.87
TRBV5-3A0A0A0MS03 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
TRBV5-3A0A0A0MS03 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.35□□□□□ -1.87
TRBV5-3A0A0A0MS03 AC121333.1-201ENST00000567488 2709 ntBASIC3.35□□□□□ -1.87
TRBV5-3A0A0A0MS03 AP001350.1-201ENST00000601906 1524 ntBASIC3.34□□□□□ -1.87
TRBV5-3A0A0A0MS03 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
TRBV5-3A0A0A0MS03 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
TRBV5-3A0A0A0MS03 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC3.34□□□□□ -1.87
TRBV5-3A0A0A0MS03 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.34□□□□□ -1.87
TRBV5-3A0A0A0MS03 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
TRBV5-3A0A0A0MS03 RNU5A-1-201ENST00000362698 116 ntBASIC3.34□□□□□ -1.87
TRBV5-3A0A0A0MS03 Y_RNA.67-201ENST00000362870 100 ntBASIC3.34□□□□□ -1.87
TRBV5-3A0A0A0MS03 SNORA56-201ENST00000383966 129 ntBASIC3.34□□□□□ -1.87
TRBV5-3A0A0A0MS03 RNU6-1013P-201ENST00000384180 107 ntBASIC3.34□□□□□ -1.87
TRBV5-3A0A0A0MS03 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
TRBV5-3A0A0A0MS03 CISD1P1-201ENST00000393907 327 ntBASIC3.34□□□□□ -1.87
TRBV5-3A0A0A0MS03 PPIAP31-201ENST00000405422 495 ntBASIC3.34□□□□□ -1.87
TRBV5-3A0A0A0MS03 RNU6ATAC16P-201ENST00000408591 138 ntBASIC3.34□□□□□ -1.87
TRBV5-3A0A0A0MS03 POLHP1-201ENST00000411806 470 ntBASIC3.34□□□□□ -1.87
TRBV5-3A0A0A0MS03 AC092809.3-201ENST00000415453 231 ntBASIC3.34□□□□□ -1.87
TRBV5-3A0A0A0MS03 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.34□□□□□ -1.87
TRBV5-3A0A0A0MS03 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.34□□□□□ -1.87
TRBV5-3A0A0A0MS03 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
TRBV5-3A0A0A0MS03 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.34□□□□□ -1.87
TRBV5-3A0A0A0MS03 AL357552.1-201ENST00000445254 415 ntBASIC3.34□□□□□ -1.87
TRBV5-3A0A0A0MS03 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
TRBV5-3A0A0A0MS03 RPS15AP27-201ENST00000449183 343 ntBASIC3.34□□□□□ -1.87
TRBV5-3A0A0A0MS03 AC233279.1-201ENST00000455300 423 ntBASIC3.34□□□□□ -1.87
TRBV5-3A0A0A0MS03 snoU13.24-201ENST00000458998 104 ntBASIC3.34□□□□□ -1.87
TRBV5-3A0A0A0MS03 RNU7-66P-201ENST00000459469 62 ntBASIC3.34□□□□□ -1.87
TRBV5-3A0A0A0MS03 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC3.34□□□□□ -1.87
TRBV5-3A0A0A0MS03 RPL21P93-201ENST00000480465 489 ntBASIC3.34□□□□□ -1.87
TRBV5-3A0A0A0MS03 AC108860.1-201ENST00000484521 383 ntBASIC3.34□□□□□ -1.87
TRBV5-3A0A0A0MS03 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC3.34□□□□□ -1.87
TRBV5-3A0A0A0MS03 HMGB1P22-201ENST00000505315 124 ntBASIC3.34□□□□□ -1.87
TRBV5-3A0A0A0MS03 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.34□□□□□ -1.87
TRBV5-3A0A0A0MS03 SNORA31.3-201ENST00000516029 96 ntBASIC3.34□□□□□ -1.87
TRBV5-3A0A0A0MS03 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC3.34□□□□□ -1.87
TRBV5-3A0A0A0MS03 AP001804.3-201ENST00000525146 880 ntBASIC3.34□□□□□ -1.87
TRBV5-3A0A0A0MS03 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.34□□□□□ -1.87
TRBV5-3A0A0A0MS03 AL355836.1-201ENST00000555951 870 ntBASIC3.34□□□□□ -1.87
TRBV5-3A0A0A0MS03 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC3.34□□□□□ -1.87
TRBV5-3A0A0A0MS03 AC244505.7-201ENST00000599675 272 ntBASIC3.34□□□□□ -1.87
TRBV5-3A0A0A0MS03 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC3.34□□□□□ -1.87
TRBV5-3A0A0A0MS03 AC092747.3-201ENST00000603769 301 ntBASIC3.34□□□□□ -1.87
TRBV5-3A0A0A0MS03 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC3.34□□□□□ -1.87
TRBV5-3A0A0A0MS03 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC3.34□□□□□ -1.87
TRBV5-3A0A0A0MS03 AL050343.2-201ENST00000607338 280 ntBASIC3.34□□□□□ -1.87
TRBV5-3A0A0A0MS03 Z82243.1-201ENST00000609432 473 ntBASIC3.34□□□□□ -1.87
TRBV5-3A0A0A0MS03 AC009570.1-201ENST00000609599 745 ntBASIC3.34□□□□□ -1.87
TRBV5-3A0A0A0MS03 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
TRBV5-3A0A0A0MS03 AL391261.4-201ENST00000616012 481 ntBASIC3.34□□□□□ -1.87
TRBV5-3A0A0A0MS03 VPS8-228ENST00000628962 207 ntTSL 5 BASIC3.34□□□□□ -1.87
TRBV5-3A0A0A0MS03 AL133216.2-202ENST00000634512 349 ntBASIC3.34□□□□□ -1.87
TRBV5-3A0A0A0MS03 MTND5P42-201ENST00000637720 498 ntBASIC3.34□□□□□ -1.87
TRBV5-3A0A0A0MS03 MFSD8-233ENST00000641482 4860 ntBASIC3.34□□□□□ -1.87
TRBV5-3A0A0A0MS03 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.34□□□□□ -1.88
TRBV5-3A0A0A0MS03 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
TRBV5-3A0A0A0MS03 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.88
TRBV5-3A0A0A0MS03 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.88
TRBV5-3A0A0A0MS03 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
TRBV5-3A0A0A0MS03 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.33□□□□□ -1.88
TRBV5-3A0A0A0MS03 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.33□□□□□ -1.88
TRBV5-3A0A0A0MS03 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC3.33□□□□□ -1.88
TRBV5-3A0A0A0MS03 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
TRBV5-3A0A0A0MS03 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
TRBV5-3A0A0A0MS03 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
TRBV5-3A0A0A0MS03 Y_RNA.301-201ENST00000364990 103 ntBASIC3.33□□□□□ -1.88
TRBV5-3A0A0A0MS03 SNORD70.1-201ENST00000391007 85 ntBASIC3.33□□□□□ -1.88
TRBV5-3A0A0A0MS03 RNU6-817P-201ENST00000391083 104 ntBASIC3.33□□□□□ -1.88
TRBV5-3A0A0A0MS03 RPL31P12-201ENST00000422587 358 ntBASIC3.33□□□□□ -1.88
TRBV5-3A0A0A0MS03 HMGB1P27-201ENST00000431429 603 ntBASIC3.33□□□□□ -1.88
TRBV5-3A0A0A0MS03 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.33□□□□□ -1.88
TRBV5-3A0A0A0MS03 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.33□□□□□ -1.88
TRBV5-3A0A0A0MS03 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC3.33□□□□□ -1.88
TRBV5-3A0A0A0MS03 AC006539.3-201ENST00000454258 129 ntBASIC3.33□□□□□ -1.88
TRBV5-3A0A0A0MS03 AP001086.1-201ENST00000494882 321 ntBASIC3.33□□□□□ -1.88
TRBV5-3A0A0A0MS03 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC3.33□□□□□ -1.88
TRBV5-3A0A0A0MS03 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC3.33□□□□□ -1.88
TRBV5-3A0A0A0MS03 MEPE-206ENST00000511670 550 ntTSL 4 BASIC3.33□□□□□ -1.88
TRBV5-3A0A0A0MS03 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.33□□□□□ -1.88
TRBV5-3A0A0A0MS03 RNU6-864P-201ENST00000516256 108 ntBASIC3.33□□□□□ -1.88
TRBV5-3A0A0A0MS03 RNU6-1153P-201ENST00000516760 105 ntBASIC3.33□□□□□ -1.88
TRBV5-3A0A0A0MS03 Y_RNA.701-201ENST00000516812 110 ntBASIC3.33□□□□□ -1.88
TRBV5-3A0A0A0MS03 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 91.3 ms