Protein–RNA interactions for Protein: Q9Y446

PKP3, Plakophilin-3, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3Q9Y446 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.49□□□□□ -1.85
PKP3Q9Y446 ATM-228ENST00000639240 498 ntTSL 5 BASIC3.49□□□□□ -1.85
PKP3Q9Y446 ATM-230ENST00000640388 578 ntTSL 5 BASIC3.49□□□□□ -1.85
PKP3Q9Y446 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
PKP3Q9Y446 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.49□□□□□ -1.85
PKP3Q9Y446 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
PKP3Q9Y446 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC3.49□□□□□ -1.85
PKP3Q9Y446 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
PKP3Q9Y446 API5P2-201ENST00000397055 1498 ntBASIC3.48□□□□□ -1.85
PKP3Q9Y446 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
PKP3Q9Y446 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
PKP3Q9Y446 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
PKP3Q9Y446 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
PKP3Q9Y446 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
PKP3Q9Y446 RNY3P3-201ENST00000363816 102 ntBASIC3.48□□□□□ -1.85
PKP3Q9Y446 RNU6-1029P-201ENST00000384109 107 ntBASIC3.48□□□□□ -1.85
PKP3Q9Y446 RNU6-190P-201ENST00000384154 102 ntBASIC3.48□□□□□ -1.85
PKP3Q9Y446 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
PKP3Q9Y446 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.48□□□□□ -1.85
PKP3Q9Y446 RNA5SP129-201ENST00000410276 118 ntBASIC3.48□□□□□ -1.85
PKP3Q9Y446 RNU6-387P-201ENST00000411331 105 ntBASIC3.48□□□□□ -1.85
PKP3Q9Y446 SNRPEP10-201ENST00000420249 274 ntBASIC3.48□□□□□ -1.85
PKP3Q9Y446 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.48□□□□□ -1.85
PKP3Q9Y446 AL356867.1-201ENST00000429623 299 ntBASIC3.48□□□□□ -1.85
PKP3Q9Y446 HMGB1P27-201ENST00000431429 603 ntBASIC3.48□□□□□ -1.85
PKP3Q9Y446 ATP5JP1-201ENST00000431631 322 ntBASIC3.48□□□□□ -1.85
PKP3Q9Y446 CALM1P1-201ENST00000442082 433 ntBASIC3.48□□□□□ -1.85
PKP3Q9Y446 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.48□□□□□ -1.85
PKP3Q9Y446 RPL21P23-201ENST00000446654 460 ntBASIC3.48□□□□□ -1.85
PKP3Q9Y446 MTND4P18-201ENST00000447010 465 ntBASIC3.48□□□□□ -1.85
PKP3Q9Y446 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.48□□□□□ -1.85
PKP3Q9Y446 FABP5P13-201ENST00000452144 328 ntBASIC3.48□□□□□ -1.85
PKP3Q9Y446 U3.44-201ENST00000458938 192 ntBASIC3.48□□□□□ -1.85
PKP3Q9Y446 HMGB3P15-201ENST00000507326 574 ntBASIC3.48□□□□□ -1.85
PKP3Q9Y446 AC026784.1-201ENST00000507986 352 ntBASIC3.48□□□□□ -1.85
PKP3Q9Y446 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
PKP3Q9Y446 RNA5SP401-201ENST00000515920 127 ntBASIC3.48□□□□□ -1.85
PKP3Q9Y446 SNORA70.16-201ENST00000516390 95 ntBASIC3.48□□□□□ -1.85
PKP3Q9Y446 SCARNA15.2-201ENST00000516409 127 ntBASIC3.48□□□□□ -1.85
PKP3Q9Y446 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC3.48□□□□□ -1.85
PKP3Q9Y446 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.48□□□□□ -1.85
PKP3Q9Y446 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.48□□□□□ -1.85
PKP3Q9Y446 MIR4425-201ENST00000580572 84 ntBASIC3.48□□□□□ -1.85
PKP3Q9Y446 AC002545.1-201ENST00000592511 181 ntBASIC3.48□□□□□ -1.85
PKP3Q9Y446 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.48□□□□□ -1.85
PKP3Q9Y446 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.48□□□□□ -1.85
PKP3Q9Y446 U3.45-201ENST00000607547 219 ntBASIC3.48□□□□□ -1.85
PKP3Q9Y446 AL365204.3-201ENST00000612448 685 ntBASIC3.48□□□□□ -1.85
PKP3Q9Y446 AL391261.4-201ENST00000616012 481 ntBASIC3.48□□□□□ -1.85
PKP3Q9Y446 AC024940.5-201ENST00000622889 474 ntBASIC3.48□□□□□ -1.85
PKP3Q9Y446 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
PKP3Q9Y446 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.48□□□□□ -1.85
PKP3Q9Y446 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.48□□□□□ -1.85
PKP3Q9Y446 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
PKP3Q9Y446 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
PKP3Q9Y446 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
PKP3Q9Y446 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
PKP3Q9Y446 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC3.47□□□□□ -1.85
PKP3Q9Y446 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC3.47□□□□□ -1.85
PKP3Q9Y446 RNU6-817P-201ENST00000391083 104 ntBASIC3.47□□□□□ -1.85
PKP3Q9Y446 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.47□□□□□ -1.85
PKP3Q9Y446 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.47□□□□□ -1.85
PKP3Q9Y446 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC3.47□□□□□ -1.85
PKP3Q9Y446 BX842559.1-201ENST00000419615 532 ntBASIC3.47□□□□□ -1.85
PKP3Q9Y446 MTCYBP8-201ENST00000422855 651 ntBASIC3.47□□□□□ -1.85
PKP3Q9Y446 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC3.47□□□□□ -1.85
PKP3Q9Y446 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC3.47□□□□□ -1.85
PKP3Q9Y446 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC3.47□□□□□ -1.85
PKP3Q9Y446 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.47□□□□□ -1.85
PKP3Q9Y446 HMGB1P31-201ENST00000437242 427 ntBASIC3.47□□□□□ -1.85
PKP3Q9Y446 AL353572.1-201ENST00000442490 417 ntBASIC3.47□□□□□ -1.85
PKP3Q9Y446 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.47□□□□□ -1.85
PKP3Q9Y446 AC073415.1-201ENST00000449240 153 ntBASIC3.47□□□□□ -1.85
PKP3Q9Y446 MRPS31P2-201ENST00000451581 518 ntBASIC3.47□□□□□ -1.85
PKP3Q9Y446 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC3.47□□□□□ -1.85
PKP3Q9Y446 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC3.47□□□□□ -1.85
PKP3Q9Y446 RNU6-953P-201ENST00000459154 107 ntBASIC3.47□□□□□ -1.85
PKP3Q9Y446 SNORA84-201ENST00000459229 133 ntBASIC3.47□□□□□ -1.85
PKP3Q9Y446 AC069439.1-201ENST00000494739 167 ntBASIC3.47□□□□□ -1.85
PKP3Q9Y446 RNA5SP468-201ENST00000516782 93 ntBASIC3.47□□□□□ -1.85
PKP3Q9Y446 RNU6-677P-201ENST00000516914 101 ntBASIC3.47□□□□□ -1.85
PKP3Q9Y446 RN7SKP60-201ENST00000516985 239 ntBASIC3.47□□□□□ -1.85
PKP3Q9Y446 RN7SKP289-201ENST00000517244 295 ntBASIC3.47□□□□□ -1.85
PKP3Q9Y446 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC3.47□□□□□ -1.85
PKP3Q9Y446 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC3.47□□□□□ -1.85
PKP3Q9Y446 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC3.47□□□□□ -1.85
PKP3Q9Y446 MIR4703-201ENST00000577728 79 ntBASIC3.47□□□□□ -1.85
PKP3Q9Y446 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.47□□□□□ -1.85
PKP3Q9Y446 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.47□□□□□ -1.85
PKP3Q9Y446 AC174048.1-201ENST00000603389 144 ntBASIC3.47□□□□□ -1.85
PKP3Q9Y446 AC106900.2-201ENST00000604994 317 ntBASIC3.47□□□□□ -1.85
PKP3Q9Y446 SNORA51-201ENST00000606420 132 ntBASIC3.47□□□□□ -1.85
PKP3Q9Y446 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.47□□□□□ -1.85
PKP3Q9Y446 AL020991.1-201ENST00000612314 373 ntBASIC3.47□□□□□ -1.85
PKP3Q9Y446 AP001486.3-201ENST00000615334 372 ntBASIC3.47□□□□□ -1.85
PKP3Q9Y446 uc_338.11-201ENST00000619132 160 ntBASIC3.47□□□□□ -1.85
PKP3Q9Y446 AC011155.2-201ENST00000623202 216 ntBASIC3.47□□□□□ -1.85
PKP3Q9Y446 MIR3662-201ENST00000637030 95 ntBASIC3.47□□□□□ -1.85
PKP3Q9Y446 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
PKP3Q9Y446 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.46□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 91.2 ms