Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 AC072039.1-201ENST00000477611 581 ntBASIC2.81□□□□□ -1.96
HPS4Q9NQG7 RPS27AP9-201ENST00000477681 438 ntBASIC2.81□□□□□ -1.96
HPS4Q9NQG7 AC068587.2-201ENST00000478386 781 ntBASIC2.81□□□□□ -1.96
HPS4Q9NQG7 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC2.81□□□□□ -1.96
HPS4Q9NQG7 AC010486.1-201ENST00000511793 424 ntBASIC2.81□□□□□ -1.96
HPS4Q9NQG7 DUXAP5-201ENST00000529668 529 ntBASIC2.81□□□□□ -1.96
HPS4Q9NQG7 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC2.81□□□□□ -1.96
HPS4Q9NQG7 HPRT1P3-201ENST00000539521 576 ntBASIC2.81□□□□□ -1.96
HPS4Q9NQG7 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC2.81□□□□□ -1.96
HPS4Q9NQG7 ZNF321P-202ENST00000550843 495 ntBASIC2.81□□□□□ -1.96
HPS4Q9NQG7 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC2.81□□□□□ -1.96
HPS4Q9NQG7 MIR4435-1-201ENST00000582552 80 ntBASIC2.81□□□□□ -1.96
HPS4Q9NQG7 MIR4307-201ENST00000582802 84 ntBASIC2.81□□□□□ -1.96
HPS4Q9NQG7 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC2.81□□□□□ -1.96
HPS4Q9NQG7 AL161629.2-201ENST00000615347 275 ntBASIC2.81□□□□□ -1.96
HPS4Q9NQG7 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.81□□□□□ -1.96
HPS4Q9NQG7 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.8□□□□□ -1.96
HPS4Q9NQG7 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
HPS4Q9NQG7 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC2.8□□□□□ -1.96
HPS4Q9NQG7 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC2.8□□□□□ -1.96
HPS4Q9NQG7 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
HPS4Q9NQG7 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
HPS4Q9NQG7 RNU1-105P-201ENST00000363470 161 ntBASIC2.8□□□□□ -1.96
HPS4Q9NQG7 RNA5SP68-201ENST00000363885 119 ntBASIC2.8□□□□□ -1.96
HPS4Q9NQG7 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.8□□□□□ -1.96
HPS4Q9NQG7 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC2.8□□□□□ -1.96
HPS4Q9NQG7 RNU6-193P-201ENST00000410977 107 ntBASIC2.8□□□□□ -1.96
HPS4Q9NQG7 RPL21P24-201ENST00000413752 448 ntBASIC2.8□□□□□ -1.96
HPS4Q9NQG7 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC2.8□□□□□ -1.96
HPS4Q9NQG7 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC2.8□□□□□ -1.96
HPS4Q9NQG7 AC092447.3-201ENST00000426027 686 ntBASIC2.8□□□□□ -1.96
HPS4Q9NQG7 AC007919.1-201ENST00000429380 217 ntBASIC2.8□□□□□ -1.96
HPS4Q9NQG7 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC2.8□□□□□ -1.96
HPS4Q9NQG7 MYL8P-204ENST00000431574 518 ntBASIC2.8□□□□□ -1.96
HPS4Q9NQG7 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC2.8□□□□□ -1.96
HPS4Q9NQG7 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC2.8□□□□□ -1.96
HPS4Q9NQG7 AL513043.1-201ENST00000439124 535 ntBASIC2.8□□□□□ -1.96
HPS4Q9NQG7 Z82210.1-201ENST00000440037 231 ntBASIC2.8□□□□□ -1.96
HPS4Q9NQG7 PIGFP3-201ENST00000441918 722 ntBASIC2.8□□□□□ -1.96
HPS4Q9NQG7 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.8□□□□□ -1.96
HPS4Q9NQG7 ELOCP30-201ENST00000447108 299 ntBASIC2.8□□□□□ -1.96
HPS4Q9NQG7 FTH1P25-201ENST00000447665 469 ntBASIC2.8□□□□□ -1.96
HPS4Q9NQG7 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC2.8□□□□□ -1.96
HPS4Q9NQG7 EEF1B2P7-201ENST00000451177 676 ntBASIC2.8□□□□□ -1.96
HPS4Q9NQG7 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC2.8□□□□□ -1.96
HPS4Q9NQG7 RNU7-59P-201ENST00000459101 61 ntBASIC2.8□□□□□ -1.96
HPS4Q9NQG7 RPS20P22-201ENST00000473700 357 ntBASIC2.8□□□□□ -1.96
HPS4Q9NQG7 AC010631.1-201ENST00000474150 156 ntBASIC2.8□□□□□ -1.96
HPS4Q9NQG7 AC103975.1-201ENST00000482506 483 ntBASIC2.8□□□□□ -1.96
HPS4Q9NQG7 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC2.8□□□□□ -1.96
HPS4Q9NQG7 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC2.8□□□□□ -1.96
HPS4Q9NQG7 RNU6-390P-201ENST00000516259 103 ntBASIC2.8□□□□□ -1.96
HPS4Q9NQG7 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC2.8□□□□□ -1.96
HPS4Q9NQG7 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC2.8□□□□□ -1.96
HPS4Q9NQG7 AP000907.2-201ENST00000530827 353 ntBASIC2.8□□□□□ -1.96
HPS4Q9NQG7 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC2.8□□□□□ -1.96
HPS4Q9NQG7 AC091544.4-201ENST00000555268 342 ntBASIC2.8□□□□□ -1.96
HPS4Q9NQG7 AC068135.2-201ENST00000569293 1028 ntBASIC2.8□□□□□ -1.96
HPS4Q9NQG7 AP001004.1-201ENST00000582468 324 ntBASIC2.8□□□□□ -1.96
HPS4Q9NQG7 AC002545.1-201ENST00000592511 181 ntBASIC2.8□□□□□ -1.96
HPS4Q9NQG7 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC2.8□□□□□ -1.96
HPS4Q9NQG7 AC008751.2-201ENST00000597885 980 ntBASIC2.8□□□□□ -1.96
HPS4Q9NQG7 AC068790.3-201ENST00000602988 553 ntBASIC2.8□□□□□ -1.96
HPS4Q9NQG7 AC112187.2-201ENST00000604345 283 ntBASIC2.8□□□□□ -1.96
HPS4Q9NQG7 AL355472.4-201ENST00000610233 626 ntBASIC2.8□□□□□ -1.96
HPS4Q9NQG7 AL020991.1-201ENST00000612314 373 ntBASIC2.8□□□□□ -1.96
HPS4Q9NQG7 AC004852.3-201ENST00000614131 326 ntBASIC2.8□□□□□ -1.96
HPS4Q9NQG7 MIR6817-201ENST00000615588 66 ntBASIC2.8□□□□□ -1.96
HPS4Q9NQG7 AC097655.1-201ENST00000635075 318 ntBASIC2.8□□□□□ -1.96
HPS4Q9NQG7 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC2.8□□□□□ -1.96
HPS4Q9NQG7 FO624990.1-201ENST00000636373 85 ntBASIC2.8□□□□□ -1.96
HPS4Q9NQG7 MTND1P37-201ENST00000636562 264 ntBASIC2.8□□□□□ -1.96
HPS4Q9NQG7 AC007671.2-201ENST00000637344 619 ntBASIC2.8□□□□□ -1.96
HPS4Q9NQG7 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
HPS4Q9NQG7 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.8□□□□□ -1.96
HPS4Q9NQG7 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.8□□□□□ -1.96
HPS4Q9NQG7 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.79□□□□□ -1.96
HPS4Q9NQG7 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.79□□□□□ -1.96
HPS4Q9NQG7 RPL9P7-201ENST00000330965 580 ntBASIC2.79□□□□□ -1.96
HPS4Q9NQG7 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
HPS4Q9NQG7 AL356057.2-201ENST00000403318 432 ntBASIC2.79□□□□□ -1.96
HPS4Q9NQG7 RPL23AP39-201ENST00000415533 405 ntBASIC2.79□□□□□ -1.96
HPS4Q9NQG7 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC2.79□□□□□ -1.96
HPS4Q9NQG7 AC099548.1-201ENST00000421443 426 ntBASIC2.79□□□□□ -1.96
HPS4Q9NQG7 AL365496.1-201ENST00000426885 215 ntBASIC2.79□□□□□ -1.96
HPS4Q9NQG7 AC112220.1-201ENST00000434628 355 ntBASIC2.79□□□□□ -1.96
HPS4Q9NQG7 AC129850.1-201ENST00000436203 508 ntBASIC2.79□□□□□ -1.96
HPS4Q9NQG7 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.79□□□□□ -1.96
HPS4Q9NQG7 AL714022.1-201ENST00000439897 151 ntBASIC2.79□□□□□ -1.96
HPS4Q9NQG7 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC2.79□□□□□ -1.96
HPS4Q9NQG7 AL513328.1-201ENST00000446460 224 ntBASIC2.79□□□□□ -1.96
HPS4Q9NQG7 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC2.79□□□□□ -1.96
HPS4Q9NQG7 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC2.79□□□□□ -1.96
HPS4Q9NQG7 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC2.79□□□□□ -1.96
HPS4Q9NQG7 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC2.79□□□□□ -1.96
HPS4Q9NQG7 AC003982.1-202ENST00000469928 248 ntBASIC2.79□□□□□ -1.96
HPS4Q9NQG7 AC116337.2-201ENST00000477662 156 ntBASIC2.79□□□□□ -1.96
HPS4Q9NQG7 AC090525.1-201ENST00000479116 478 ntBASIC2.79□□□□□ -1.96
HPS4Q9NQG7 LINC00888-204ENST00000487386 421 ntBASIC2.79□□□□□ -1.96
HPS4Q9NQG7 AIG1P1-201ENST00000503376 148 ntBASIC2.79□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms