Protein–RNA interactions for Protein: Q9H7N4

SCAF1, Splicing factor, arginine/serine-rich 19, humanhuman

Known RBP Predictions only

Length 1,312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1Q9H7N4 RNU6-572P-201ENST00000516724 80 ntBASIC8.85□□□□□ -0.99
SCAF1Q9H7N4 POLR3GP1-201ENST00000594073 261 ntBASIC8.85□□□□□ -0.99
SCAF1Q9H7N4 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
SCAF1Q9H7N4 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC8.85□□□□□ -0.99
SCAF1Q9H7N4 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
SCAF1Q9H7N4 AC022336.2-201ENST00000568966 2538 ntBASIC8.85□□□□□ -0.99
SCAF1Q9H7N4 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
SCAF1Q9H7N4 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
SCAF1Q9H7N4 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
SCAF1Q9H7N4 SNORA21-201ENST00000362423 132 ntBASIC8.84□□□□□ -0.99
SCAF1Q9H7N4 RNU6-727P-201ENST00000363592 107 ntBASIC8.84□□□□□ -0.99
SCAF1Q9H7N4 RNU6-1125P-201ENST00000363601 107 ntBASIC8.84□□□□□ -0.99
SCAF1Q9H7N4 RNU6-454P-201ENST00000364292 107 ntBASIC8.84□□□□□ -0.99
SCAF1Q9H7N4 U3.10-201ENST00000364459 214 ntBASIC8.84□□□□□ -0.99
SCAF1Q9H7N4 SNORD32A-201ENST00000364805 84 ntBASIC8.84□□□□□ -0.99
SCAF1Q9H7N4 RNU6-793P-201ENST00000384233 104 ntBASIC8.84□□□□□ -0.99
SCAF1Q9H7N4 RNU6-72P-201ENST00000384285 79 ntBASIC8.84□□□□□ -0.99
SCAF1Q9H7N4 RNA5SP56-201ENST00000410277 118 ntBASIC8.84□□□□□ -0.99
SCAF1Q9H7N4 AL135786.1-201ENST00000415892 214 ntBASIC8.84□□□□□ -0.99
SCAF1Q9H7N4 AC008134.1-201ENST00000420943 193 ntBASIC8.84□□□□□ -0.99
SCAF1Q9H7N4 EEF1B2P6-201ENST00000445713 673 ntBASIC8.84□□□□□ -0.99
SCAF1Q9H7N4 SNRPGP8-201ENST00000454064 226 ntBASIC8.84□□□□□ -0.99
SCAF1Q9H7N4 SNRPGP7-201ENST00000469016 106 ntBASIC8.84□□□□□ -0.99
SCAF1Q9H7N4 ATP5EP1-201ENST00000510257 156 ntBASIC8.84□□□□□ -0.99
SCAF1Q9H7N4 KHDC1P1-201ENST00000511053 508 ntBASIC8.84□□□□□ -0.99
SCAF1Q9H7N4 RFPL4AP5-201ENST00000514977 504 ntBASIC8.84□□□□□ -0.99
SCAF1Q9H7N4 AC027369.5-201ENST00000533838 755 ntBASIC8.84□□□□□ -0.99
SCAF1Q9H7N4 AC137627.1-201ENST00000545761 289 ntBASIC8.84□□□□□ -0.99
SCAF1Q9H7N4 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC8.84□□□□□ -0.99
SCAF1Q9H7N4 BX005214.3-202ENST00000619809 325 ntBASIC8.84□□□□□ -0.99
SCAF1Q9H7N4 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
SCAF1Q9H7N4 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
SCAF1Q9H7N4 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
SCAF1Q9H7N4 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
SCAF1Q9H7N4 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC8.84□□□□□ -0.99
SCAF1Q9H7N4 ZBTB8B-201ENST00000609129 12834 ntAPPRIS P1 TSL 5 BASIC8.84□□□□□ -1
SCAF1Q9H7N4 SNORA36A-201ENST00000384221 132 ntBASIC8.83□□□□□ -1
SCAF1Q9H7N4 MIR590-201ENST00000385008 97 ntBASIC8.83□□□□□ -1
SCAF1Q9H7N4 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC8.83□□□□□ -1
SCAF1Q9H7N4 RNU2-32P-201ENST00000411193 191 ntBASIC8.83□□□□□ -1
SCAF1Q9H7N4 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC8.83□□□□□ -1
SCAF1Q9H7N4 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC8.83□□□□□ -1
SCAF1Q9H7N4 BIN2P1-201ENST00000504996 1530 ntBASIC8.83□□□□□ -1
SCAF1Q9H7N4 RN7SKP277-201ENST00000516895 283 ntBASIC8.83□□□□□ -1
SCAF1Q9H7N4 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC8.83□□□□□ -1
SCAF1Q9H7N4 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC8.83□□□□□ -1
SCAF1Q9H7N4 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC8.83□□□□□ -1
SCAF1Q9H7N4 MIR4505-201ENST00000582238 73 ntBASIC8.83□□□□□ -1
SCAF1Q9H7N4 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC8.83□□□□□ -1
SCAF1Q9H7N4 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
SCAF1Q9H7N4 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC8.83□□□□□ -1
SCAF1Q9H7N4 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC8.83□□□□□ -1
SCAF1Q9H7N4 SCN2A-215ENST00000637266 8610 ntAPPRIS ALT1 TSL 5 BASIC8.83□□□□□ -1
SCAF1Q9H7N4 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC8.83□□□□□ -1
SCAF1Q9H7N4 NLN-202ENST00000502464 8354 ntTSL 5 BASIC8.83□□□□□ -1
SCAF1Q9H7N4 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC8.83□□□□□ -1
SCAF1Q9H7N4 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC8.83□□□□□ -1
SCAF1Q9H7N4 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
SCAF1Q9H7N4 RNU6-1285P-201ENST00000363480 105 ntBASIC8.82□□□□□ -1
SCAF1Q9H7N4 RNA5SP507-201ENST00000363603 121 ntBASIC8.82□□□□□ -1
SCAF1Q9H7N4 SNORA5.1-201ENST00000384275 131 ntBASIC8.82□□□□□ -1
SCAF1Q9H7N4 MIR550A3-201ENST00000390735 95 ntBASIC8.82□□□□□ -1
SCAF1Q9H7N4 AL590004.2-201ENST00000404787 371 ntBASIC8.82□□□□□ -1
SCAF1Q9H7N4 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC8.82□□□□□ -1
SCAF1Q9H7N4 GPM6BP3-201ENST00000442797 145 ntBASIC8.82□□□□□ -1
SCAF1Q9H7N4 AC009220.1-201ENST00000451614 275 ntBASIC8.82□□□□□ -1
SCAF1Q9H7N4 AL354710.1-201ENST00000453641 246 ntBASIC8.82□□□□□ -1
SCAF1Q9H7N4 AC091153.1-201ENST00000466297 402 ntBASIC8.82□□□□□ -1
SCAF1Q9H7N4 AC021205.2-201ENST00000480069 347 ntBASIC8.82□□□□□ -1
SCAF1Q9H7N4 FAM71BP1-201ENST00000604431 523 ntBASIC8.82□□□□□ -1
SCAF1Q9H7N4 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC8.82□□□□□ -1
SCAF1Q9H7N4 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC8.82□□□□□ -1
SCAF1Q9H7N4 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC8.82□□□□□ -1
SCAF1Q9H7N4 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC8.82□□□□□ -1
SCAF1Q9H7N4 PAK3-203ENST00000372007 8940 ntAPPRIS P3 TSL 1 (best) BASIC8.82□□□□□ -1
SCAF1Q9H7N4 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
SCAF1Q9H7N4 AC004076.2-201ENST00000620532 3323 ntBASIC8.82□□□□□ -1
SCAF1Q9H7N4 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC8.82□□□□□ -1
SCAF1Q9H7N4 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC8.82□□□□□ -1
SCAF1Q9H7N4 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC8.82□□□□□ -1
SCAF1Q9H7N4 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC8.82□□□□□ -1
SCAF1Q9H7N4 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
SCAF1Q9H7N4 Y_RNA.341-201ENST00000365341 102 ntBASIC8.81□□□□□ -1
SCAF1Q9H7N4 RNU6-882P-201ENST00000391025 103 ntBASIC8.81□□□□□ -1
SCAF1Q9H7N4 AL031003.1-201ENST00000404229 172 ntBASIC8.81□□□□□ -1
SCAF1Q9H7N4 RNU6-855P-201ENST00000410395 104 ntBASIC8.81□□□□□ -1
SCAF1Q9H7N4 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC8.81□□□□□ -1
SCAF1Q9H7N4 MTATP8P2-201ENST00000435212 202 ntBASIC8.81□□□□□ -1
SCAF1Q9H7N4 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC8.81□□□□□ -1
SCAF1Q9H7N4 AL078601.1-201ENST00000444542 271 ntBASIC8.81□□□□□ -1
SCAF1Q9H7N4 AC009963.2-201ENST00000453431 138 ntBASIC8.81□□□□□ -1
SCAF1Q9H7N4 RN7SL30P-201ENST00000488416 306 ntBASIC8.81□□□□□ -1
SCAF1Q9H7N4 AC107016.1-201ENST00000550463 337 ntBASIC8.81□□□□□ -1
SCAF1Q9H7N4 AC100827.5-201ENST00000615883 426 ntBASIC8.81□□□□□ -1
SCAF1Q9H7N4 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC8.81□□□□□ -1
SCAF1Q9H7N4 MESTIT1_1.1-201ENST00000618871 140 ntBASIC8.81□□□□□ -1
SCAF1Q9H7N4 AL136228.1-201ENST00000622221 319 ntBASIC8.81□□□□□ -1
SCAF1Q9H7N4 SCARNA4-202ENST00000625402 129 ntBASIC8.81□□□□□ -1
SCAF1Q9H7N4 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC8.81□□□□□ -1
SCAF1Q9H7N4 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC8.81□□□□□ -1
Retrieved 100 of 98,524 protein–RNA pairs in 411.7 ms