Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 ILDR2-201ENST00000271417 13140 ntAPPRIS P2 TSL 1 (best) BASIC3.85□□□□□ -1.79
KRTAP3-3Q9BYR6 ERCC4-201ENST00000311895 6758 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
KRTAP3-3Q9BYR6 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
KRTAP3-3Q9BYR6 ASB4-202ENST00000325885 3825 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
KRTAP3-3Q9BYR6 RNU6-50P-201ENST00000362356 103 ntBASIC3.85□□□□□ -1.79
KRTAP3-3Q9BYR6 Y_RNA.207-201ENST00000364142 106 ntBASIC3.85□□□□□ -1.79
KRTAP3-3Q9BYR6 BX510359.3-201ENST00000422168 306 ntBASIC3.85□□□□□ -1.79
KRTAP3-3Q9BYR6 AC006455.7-201ENST00000422502 392 ntBASIC3.85□□□□□ -1.79
KRTAP3-3Q9BYR6 AL590762.4-201ENST00000425885 253 ntBASIC3.85□□□□□ -1.79
KRTAP3-3Q9BYR6 IFNWP4-201ENST00000453148 294 ntBASIC3.85□□□□□ -1.79
KRTAP3-3Q9BYR6 DEFA10P-201ENST00000455014 288 ntBASIC3.85□□□□□ -1.79
KRTAP3-3Q9BYR6 PTMAP1-205ENST00000455552 325 ntBASIC3.85□□□□□ -1.79
KRTAP3-3Q9BYR6 MIR2113-201ENST00000459007 91 ntBASIC3.85□□□□□ -1.79
KRTAP3-3Q9BYR6 RN7SL130P-201ENST00000489463 305 ntBASIC3.85□□□□□ -1.79
KRTAP3-3Q9BYR6 AC233724.1-201ENST00000503894 233 ntBASIC3.85□□□□□ -1.79
KRTAP3-3Q9BYR6 EGFLAM-211ENST00000514476 676 ntTSL 2 BASIC3.85□□□□□ -1.79
KRTAP3-3Q9BYR6 RN7SKP288-201ENST00000516227 268 ntBASIC3.85□□□□□ -1.79
KRTAP3-3Q9BYR6 RNU6-965P-201ENST00000516721 96 ntBASIC3.85□□□□□ -1.79
KRTAP3-3Q9BYR6 RNU6-586P-201ENST00000517265 104 ntBASIC3.85□□□□□ -1.79
KRTAP3-3Q9BYR6 AC140658.6-201ENST00000603958 201 ntBASIC3.85□□□□□ -1.79
KRTAP3-3Q9BYR6 RNVU1-19-201ENST00000613023 167 ntBASIC3.85□□□□□ -1.79
KRTAP3-3Q9BYR6 TUG1_3.1-201ENST00000616187 237 ntBASIC3.85□□□□□ -1.79
KRTAP3-3Q9BYR6 AL121985.3-201ENST00000620690 523 ntBASIC3.85□□□□□ -1.79
KRTAP3-3Q9BYR6 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC3.85□□□□□ -1.79
KRTAP3-3Q9BYR6 PLD1-217ENST00000627725 174 ntTSL 5 BASIC3.85□□□□□ -1.79
KRTAP3-3Q9BYR6 CLEC19A-205ENST00000636231 561 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
KRTAP3-3Q9BYR6 snoMe28S-Am2634.2-201ENST00000637869 80 ntBASIC3.85□□□□□ -1.79
KRTAP3-3Q9BYR6 SSPO-201ENST00000378016 15589 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
KRTAP3-3Q9BYR6 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC3.85□□□□□ -1.79
KRTAP3-3Q9BYR6 ATXN7L1-202ENST00000419735 5417 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
KRTAP3-3Q9BYR6 CACNB2-207ENST00000377329 3396 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
KRTAP3-3Q9BYR6 CAND1-208ENST00000545606 11251 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
KRTAP3-3Q9BYR6 CBFA2T2-203ENST00000346541 7737 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
KRTAP3-3Q9BYR6 CLASP1-208ENST00000455322 5660 ntTSL 5 BASIC3.85□□□□□ -1.79
KRTAP3-3Q9BYR6 AC104964.2-201ENST00000562242 4641 ntBASIC3.85□□□□□ -1.79
KRTAP3-3Q9BYR6 ZNF248-208ENST00000611278 4204 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
KRTAP3-3Q9BYR6 TNC-202ENST00000350763 7641 ntAPPRIS P2 TSL 1 (best) BASIC3.85□□□□□ -1.79
KRTAP3-3Q9BYR6 MBP-206ENST00000397863 4800 ntTSL 3 BASIC3.85□□□□□ -1.79
KRTAP3-3Q9BYR6 ROBO2-201ENST00000332191 5437 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
KRTAP3-3Q9BYR6 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC3.85□□□□□ -1.79
KRTAP3-3Q9BYR6 GAPVD1-201ENST00000265956 2667 ntTSL 5 BASIC3.85□□□□□ -1.79
KRTAP3-3Q9BYR6 MAP3K9-207ENST00000611979 10497 ntTSL 5 BASIC3.85□□□□□ -1.79
KRTAP3-3Q9BYR6 SH3D19-210ENST00000514152 5107 ntAPPRIS ALT1 TSL 2 BASIC3.85□□□□□ -1.79
KRTAP3-3Q9BYR6 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
KRTAP3-3Q9BYR6 F5-201ENST00000367796 7039 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
KRTAP3-3Q9BYR6 F5-202ENST00000367797 7024 ntAPPRIS P2 TSL 1 (best) BASIC3.85□□□□□ -1.79
KRTAP3-3Q9BYR6 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
KRTAP3-3Q9BYR6 TRPM3-204ENST00000360823 5966 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
KRTAP3-3Q9BYR6 ARNT2-207ENST00000533983 6690 ntAPPRIS ALT1 TSL 5 BASIC3.85□□□□□ -1.79
KRTAP3-3Q9BYR6 SGMS1-AS1-201ENST00000443374 12400 ntTSL 4 BASIC3.85□□□□□ -1.79
KRTAP3-3Q9BYR6 ZNF845-202ENST00000595091 4413 ntAPPRIS P1 TSL 4 BASIC3.84□□□□□ -1.79
KRTAP3-3Q9BYR6 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
KRTAP3-3Q9BYR6 BCLAF3-203ENST00000379687 6528 ntAPPRIS P2 TSL 5 BASIC3.84□□□□□ -1.79
KRTAP3-3Q9BYR6 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
KRTAP3-3Q9BYR6 NNT-AS1-204ENST00000513560 4769 ntTSL 2 BASIC3.84□□□□□ -1.79
KRTAP3-3Q9BYR6 LRIG2-201ENST00000361127 11555 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
KRTAP3-3Q9BYR6 RNF14-204ENST00000394519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
KRTAP3-3Q9BYR6 SMG1P2-201ENST00000566127 4221 ntBASIC3.84□□□□□ -1.79
KRTAP3-3Q9BYR6 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
KRTAP3-3Q9BYR6 AC109361.1-201ENST00000513220 3526 ntTSL 2 BASIC3.84□□□□□ -1.79
KRTAP3-3Q9BYR6 HOOK3-201ENST00000307602 14398 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
KRTAP3-3Q9BYR6 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
KRTAP3-3Q9BYR6 SECISBP2L-209ENST00000559471 7176 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
KRTAP3-3Q9BYR6 LCN1-201ENST00000263598 776 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
KRTAP3-3Q9BYR6 RNA5SP250-201ENST00000362534 119 ntBASIC3.84□□□□□ -1.79
KRTAP3-3Q9BYR6 RNA5SP455-201ENST00000365190 119 ntBASIC3.84□□□□□ -1.79
KRTAP3-3Q9BYR6 RNY4P3-201ENST00000365254 95 ntBASIC3.84□□□□□ -1.79
KRTAP3-3Q9BYR6 AL450124.1-201ENST00000376401 353 ntBASIC3.84□□□□□ -1.79
KRTAP3-3Q9BYR6 RPS6KA2-IT1-201ENST00000416770 579 ntTSL 3 BASIC3.84□□□□□ -1.79
KRTAP3-3Q9BYR6 LYPLA2P3-201ENST00000417429 576 ntBASIC3.84□□□□□ -1.79
KRTAP3-3Q9BYR6 AC098828.1-201ENST00000436164 440 ntBASIC3.84□□□□□ -1.79
KRTAP3-3Q9BYR6 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.84□□□□□ -1.79
KRTAP3-3Q9BYR6 ACTP1-201ENST00000440793 383 ntBASIC3.84□□□□□ -1.79
KRTAP3-3Q9BYR6 RN7SL333P-201ENST00000476398 297 ntBASIC3.84□□□□□ -1.79
KRTAP3-3Q9BYR6 LINC02517-201ENST00000509453 492 ntTSL 2 BASIC3.84□□□□□ -1.79
KRTAP3-3Q9BYR6 AC084121.1-201ENST00000533882 835 ntBASIC3.84□□□□□ -1.79
KRTAP3-3Q9BYR6 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC3.84□□□□□ -1.79
KRTAP3-3Q9BYR6 AP007216.1-201ENST00000563932 385 ntTSL 3 BASIC3.84□□□□□ -1.79
KRTAP3-3Q9BYR6 EIF5AP3-201ENST00000589460 462 ntBASIC3.84□□□□□ -1.79
KRTAP3-3Q9BYR6 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC3.84□□□□□ -1.79
KRTAP3-3Q9BYR6 SNORD14A-201ENST00000606526 91 ntBASIC3.84□□□□□ -1.79
KRTAP3-3Q9BYR6 MIR8065-201ENST00000620577 100 ntBASIC3.84□□□□□ -1.79
KRTAP3-3Q9BYR6 AP000550.3-201ENST00000637734 379 ntBASIC3.84□□□□□ -1.79
KRTAP3-3Q9BYR6 ZNFX1-204ENST00000396105 7371 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
KRTAP3-3Q9BYR6 PEG10-202ENST00000482108 6618 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
KRTAP3-3Q9BYR6 MFSD8-217ENST00000641178 4374 ntBASIC3.84□□□□□ -1.8
KRTAP3-3Q9BYR6 RBM12-203ENST00000374114 6662 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
KRTAP3-3Q9BYR6 FREM1-202ENST00000380880 7324 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.8
KRTAP3-3Q9BYR6 LEPR-203ENST00000371058 2805 ntTSL 5 BASIC3.84□□□□□ -1.8
KRTAP3-3Q9BYR6 CXCR6-204ENST00000458629 2805 ntAPPRIS P1 BASIC3.84□□□□□ -1.8
KRTAP3-3Q9BYR6 GCSAML-211ENST00000623578 3959 ntAPPRIS ALT2 TSL 4 BASIC3.84□□□□□ -1.8
KRTAP3-3Q9BYR6 HLTF-203ENST00000465259 5306 ntAPPRIS ALT1 TSL 1 (best) BASIC3.84□□□□□ -1.8
KRTAP3-3Q9BYR6 ECT2-206ENST00000417960 4363 ntAPPRIS ALT1 TSL 1 (best) BASIC3.84□□□□□ -1.8
KRTAP3-3Q9BYR6 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
KRTAP3-3Q9BYR6 SPOCK1-201ENST00000282223 4488 ntTSL 5 BASIC3.83□□□□□ -1.8
KRTAP3-3Q9BYR6 ERC1-203ENST00000360905 5789 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
KRTAP3-3Q9BYR6 AXDND1-214ENST00000617277 3405 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
KRTAP3-3Q9BYR6 PPARA-203ENST00000407236 9995 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
KRTAP3-3Q9BYR6 RPL14-201ENST00000338970 7072 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
KRTAP3-3Q9BYR6 ATP6V1C1-201ENST00000395862 5612 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms