Protein–RNA interactions for Protein: Q96HJ5

MS4A3, Membrane-spanning 4-domains subfamily A member 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A3Q96HJ5 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC5.79□□□□□ -1.48
MS4A3Q96HJ5 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
MS4A3Q96HJ5 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC5.79□□□□□ -1.48
MS4A3Q96HJ5 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
MS4A3Q96HJ5 CENPJ-206ENST00000616936 5020 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
MS4A3Q96HJ5 DLEU2_6.3-201ENST00000340052 136 ntBASIC5.79□□□□□ -1.48
MS4A3Q96HJ5 SNORA38B-201ENST00000363524 131 ntBASIC5.79□□□□□ -1.48
MS4A3Q96HJ5 RNU1-133P-201ENST00000364867 167 ntBASIC5.79□□□□□ -1.48
MS4A3Q96HJ5 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
MS4A3Q96HJ5 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
MS4A3Q96HJ5 AC026310.1-201ENST00000396004 378 ntBASIC5.79□□□□□ -1.48
MS4A3Q96HJ5 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
MS4A3Q96HJ5 SNORA58-201ENST00000505219 137 ntBASIC5.79□□□□□ -1.48
MS4A3Q96HJ5 MRPS5P3-201ENST00000515577 166 ntBASIC5.79□□□□□ -1.48
MS4A3Q96HJ5 RNY4P20-201ENST00000516678 93 ntBASIC5.79□□□□□ -1.48
MS4A3Q96HJ5 IGKV2-19-201ENST00000518132 283 ntBASIC5.79□□□□□ -1.48
MS4A3Q96HJ5 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC5.79□□□□□ -1.48
MS4A3Q96HJ5 AC005519.1-201ENST00000554490 601 ntBASIC5.79□□□□□ -1.48
MS4A3Q96HJ5 RN7SL270P-201ENST00000579643 281 ntBASIC5.79□□□□□ -1.48
MS4A3Q96HJ5 Metazoa_SRP.202-201ENST00000585071 281 ntBASIC5.79□□□□□ -1.48
MS4A3Q96HJ5 SNORD96A-201ENST00000606577 79 ntBASIC5.79□□□□□ -1.48
MS4A3Q96HJ5 MIR6885-201ENST00000612241 66 ntBASIC5.79□□□□□ -1.48
MS4A3Q96HJ5 AC006133.1-201ENST00000617106 264 ntBASIC5.79□□□□□ -1.48
MS4A3Q96HJ5 U4atac.1-201ENST00000618345 95 ntBASIC5.79□□□□□ -1.48
MS4A3Q96HJ5 DLEU2_6.2-201ENST00000620994 136 ntBASIC5.79□□□□□ -1.48
MS4A3Q96HJ5 AC018628.1-201ENST00000624147 3819 ntBASIC5.79□□□□□ -1.48
MS4A3Q96HJ5 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
MS4A3Q96HJ5 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC5.79□□□□□ -1.48
MS4A3Q96HJ5 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC5.79□□□□□ -1.48
MS4A3Q96HJ5 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
MS4A3Q96HJ5 AC007842.1-201ENST00000597336 2039 ntBASIC5.79□□□□□ -1.48
MS4A3Q96HJ5 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
MS4A3Q96HJ5 AC139713.2-214ENST00000642059 1811 ntBASIC5.78□□□□□ -1.48
MS4A3Q96HJ5 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
MS4A3Q96HJ5 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
MS4A3Q96HJ5 GABRA2-215ENST00000540012 2588 ntTSL 5 BASIC5.78□□□□□ -1.48
MS4A3Q96HJ5 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
MS4A3Q96HJ5 LINC01579-207ENST00000557481 3480 ntTSL 5 BASIC5.78□□□□□ -1.48
MS4A3Q96HJ5 SLF1-201ENST00000265140 5905 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
MS4A3Q96HJ5 Y_RNA.10-201ENST00000362371 110 ntBASIC5.78□□□□□ -1.48
MS4A3Q96HJ5 RNA5SP140-201ENST00000364524 92 ntBASIC5.78□□□□□ -1.48
MS4A3Q96HJ5 SNORA67.2-201ENST00000384300 149 ntBASIC5.78□□□□□ -1.48
MS4A3Q96HJ5 MIR548D2-201ENST00000384955 97 ntBASIC5.78□□□□□ -1.48
MS4A3Q96HJ5 AC096949.1-201ENST00000412047 152 ntBASIC5.78□□□□□ -1.48
MS4A3Q96HJ5 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC5.78□□□□□ -1.48
MS4A3Q96HJ5 AC007568.1-201ENST00000422912 471 ntBASIC5.78□□□□□ -1.48
MS4A3Q96HJ5 RPL37P4-201ENST00000448908 268 ntBASIC5.78□□□□□ -1.48
MS4A3Q96HJ5 RN7SL83P-201ENST00000468131 297 ntBASIC5.78□□□□□ -1.48
MS4A3Q96HJ5 AIG1P1-201ENST00000503376 148 ntBASIC5.78□□□□□ -1.48
MS4A3Q96HJ5 LINC01484-201ENST00000517733 555 ntTSL 4 BASIC5.78□□□□□ -1.48
MS4A3Q96HJ5 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC5.78□□□□□ -1.48
MS4A3Q96HJ5 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
MS4A3Q96HJ5 AC103988.1-201ENST00000566382 2177 ntBASIC5.78□□□□□ -1.48
MS4A3Q96HJ5 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
MS4A3Q96HJ5 MIR2681-201ENST00000581814 105 ntBASIC5.78□□□□□ -1.48
MS4A3Q96HJ5 RN7SL66P-201ENST00000582099 264 ntBASIC5.78□□□□□ -1.48
MS4A3Q96HJ5 HCG18-243ENST00000602498 327 ntTSL 3 BASIC5.78□□□□□ -1.48
MS4A3Q96HJ5 ARF4-AS1-203ENST00000607782 552 ntTSL 3 BASIC5.78□□□□□ -1.48
MS4A3Q96HJ5 AL021997.2-201ENST00000615674 271 ntBASIC5.78□□□□□ -1.48
MS4A3Q96HJ5 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC5.78□□□□□ -1.48
MS4A3Q96HJ5 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
MS4A3Q96HJ5 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
MS4A3Q96HJ5 STIL-203ENST00000371877 5009 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
MS4A3Q96HJ5 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC5.78□□□□□ -1.48
MS4A3Q96HJ5 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
MS4A3Q96HJ5 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
MS4A3Q96HJ5 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC5.78□□□□□ -1.48
MS4A3Q96HJ5 AC011455.2-201ENST00000599320 3336 ntBASIC5.77□□□□□ -1.48
MS4A3Q96HJ5 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC5.77□□□□□ -1.49
MS4A3Q96HJ5 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
MS4A3Q96HJ5 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
MS4A3Q96HJ5 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
MS4A3Q96HJ5 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
MS4A3Q96HJ5 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC5.77□□□□□ -1.49
MS4A3Q96HJ5 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
MS4A3Q96HJ5 RNU6-1138P-201ENST00000365359 106 ntBASIC5.77□□□□□ -1.49
MS4A3Q96HJ5 RNA5SP279-201ENST00000365513 117 ntBASIC5.77□□□□□ -1.49
MS4A3Q96HJ5 RNU6-622P-201ENST00000384272 103 ntBASIC5.77□□□□□ -1.49
MS4A3Q96HJ5 RNU6-140P-201ENST00000384566 108 ntBASIC5.77□□□□□ -1.49
MS4A3Q96HJ5 MIR548B-201ENST00000385247 97 ntBASIC5.77□□□□□ -1.49
MS4A3Q96HJ5 MIR1912-201ENST00000410389 80 ntBASIC5.77□□□□□ -1.49
MS4A3Q96HJ5 NME1P1-201ENST00000420914 382 ntBASIC5.77□□□□□ -1.49
MS4A3Q96HJ5 RN7SL502P-201ENST00000481857 290 ntBASIC5.77□□□□□ -1.49
MS4A3Q96HJ5 AC009852.1-201ENST00000564058 465 ntTSL 3 BASIC5.77□□□□□ -1.49
MS4A3Q96HJ5 RPL7AP69-201ENST00000595306 806 ntBASIC5.77□□□□□ -1.49
MS4A3Q96HJ5 Six3os1_4.1-201ENST00000615706 324 ntBASIC5.77□□□□□ -1.49
MS4A3Q96HJ5 Pinc.1-201ENST00000616452 154 ntBASIC5.77□□□□□ -1.49
MS4A3Q96HJ5 U1.41-201ENST00000617626 165 ntBASIC5.77□□□□□ -1.49
MS4A3Q96HJ5 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC5.77□□□□□ -1.49
MS4A3Q96HJ5 AC002064.3-201ENST00000623448 346 ntBASIC5.77□□□□□ -1.49
MS4A3Q96HJ5 GFPT1-202ENST00000361060 8632 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
MS4A3Q96HJ5 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
MS4A3Q96HJ5 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC5.77□□□□□ -1.49
MS4A3Q96HJ5 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC5.77□□□□□ -1.49
MS4A3Q96HJ5 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC5.77□□□□□ -1.49
MS4A3Q96HJ5 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
MS4A3Q96HJ5 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC5.77□□□□□ -1.49
MS4A3Q96HJ5 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
MS4A3Q96HJ5 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
MS4A3Q96HJ5 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms