Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC3.57□□□□□ -1.84
HMGB4Q8WW32 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.57□□□□□ -1.84
HMGB4Q8WW32 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC3.57□□□□□ -1.84
HMGB4Q8WW32 AC109635.3-201ENST00000529536 185 ntBASIC3.57□□□□□ -1.84
HMGB4Q8WW32 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
HMGB4Q8WW32 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
HMGB4Q8WW32 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
HMGB4Q8WW32 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC3.57□□□□□ -1.84
HMGB4Q8WW32 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC3.57□□□□□ -1.84
HMGB4Q8WW32 AC034105.3-201ENST00000565294 442 ntBASIC3.57□□□□□ -1.84
HMGB4Q8WW32 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC3.57□□□□□ -1.84
HMGB4Q8WW32 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
HMGB4Q8WW32 AC012531.5-201ENST00000611375 151 ntBASIC3.57□□□□□ -1.84
HMGB4Q8WW32 AC007014.2-201ENST00000615581 479 ntBASIC3.57□□□□□ -1.84
HMGB4Q8WW32 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.57□□□□□ -1.84
HMGB4Q8WW32 AC011155.2-201ENST00000623202 216 ntBASIC3.57□□□□□ -1.84
HMGB4Q8WW32 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC3.57□□□□□ -1.84
HMGB4Q8WW32 ATM-228ENST00000639240 498 ntTSL 5 BASIC3.57□□□□□ -1.84
HMGB4Q8WW32 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.57□□□□□ -1.84
HMGB4Q8WW32 ATM-230ENST00000640388 578 ntTSL 5 BASIC3.57□□□□□ -1.84
HMGB4Q8WW32 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.57□□□□□ -1.84
HMGB4Q8WW32 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
HMGB4Q8WW32 AC006020.1-201ENST00000420179 1854 ntBASIC3.56□□□□□ -1.84
HMGB4Q8WW32 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
HMGB4Q8WW32 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.56□□□□□ -1.84
HMGB4Q8WW32 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
HMGB4Q8WW32 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
HMGB4Q8WW32 Y_RNA.248-201ENST00000364501 109 ntBASIC3.56□□□□□ -1.84
HMGB4Q8WW32 RNU6-741P-201ENST00000383889 107 ntBASIC3.56□□□□□ -1.84
HMGB4Q8WW32 Y_RNA.576-201ENST00000384781 102 ntBASIC3.56□□□□□ -1.84
HMGB4Q8WW32 U3.19-201ENST00000390893 196 ntBASIC3.56□□□□□ -1.84
HMGB4Q8WW32 SNORD17-201ENST00000390930 237 ntBASIC3.56□□□□□ -1.84
HMGB4Q8WW32 SNORA11.2-201ENST00000408318 127 ntBASIC3.56□□□□□ -1.84
HMGB4Q8WW32 RNU6ATAC16P-201ENST00000408591 138 ntBASIC3.56□□□□□ -1.84
HMGB4Q8WW32 MIR1183-201ENST00000408856 89 ntBASIC3.56□□□□□ -1.84
HMGB4Q8WW32 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
HMGB4Q8WW32 AMD1P2-201ENST00000412936 992 ntBASIC3.56□□□□□ -1.84
HMGB4Q8WW32 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.56□□□□□ -1.84
HMGB4Q8WW32 AC092809.3-201ENST00000415453 231 ntBASIC3.56□□□□□ -1.84
HMGB4Q8WW32 USP9YP27-201ENST00000418455 438 ntBASIC3.56□□□□□ -1.84
HMGB4Q8WW32 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC3.56□□□□□ -1.84
HMGB4Q8WW32 MTCO1P20-201ENST00000425366 358 ntBASIC3.56□□□□□ -1.84
HMGB4Q8WW32 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.56□□□□□ -1.84
HMGB4Q8WW32 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.56□□□□□ -1.84
HMGB4Q8WW32 AC000111.3-201ENST00000433478 193 ntBASIC3.56□□□□□ -1.84
HMGB4Q8WW32 NDUFB1P1-201ENST00000435191 180 ntBASIC3.56□□□□□ -1.84
HMGB4Q8WW32 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC3.56□□□□□ -1.84
HMGB4Q8WW32 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC3.56□□□□□ -1.84
HMGB4Q8WW32 CACYBPP2-201ENST00000453625 678 ntBASIC3.56□□□□□ -1.84
HMGB4Q8WW32 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC3.56□□□□□ -1.84
HMGB4Q8WW32 RNU6-261P-201ENST00000459506 102 ntBASIC3.56□□□□□ -1.84
HMGB4Q8WW32 GMFBP1-201ENST00000467831 427 ntBASIC3.56□□□□□ -1.84
HMGB4Q8WW32 SNRPGP3-201ENST00000469405 227 ntBASIC3.56□□□□□ -1.84
HMGB4Q8WW32 RPS23P3-201ENST00000470993 430 ntBASIC3.56□□□□□ -1.84
HMGB4Q8WW32 AC233702.1-201ENST00000482905 502 ntBASIC3.56□□□□□ -1.84
HMGB4Q8WW32 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.56□□□□□ -1.84
HMGB4Q8WW32 AC098591.2-201ENST00000510152 315 ntBASIC3.56□□□□□ -1.84
HMGB4Q8WW32 RNU6-835P-201ENST00000516974 104 ntBASIC3.56□□□□□ -1.84
HMGB4Q8WW32 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC3.56□□□□□ -1.84
HMGB4Q8WW32 AC008521.1-201ENST00000587471 187 ntBASIC3.56□□□□□ -1.84
HMGB4Q8WW32 AC012409.4-201ENST00000612923 249 ntBASIC3.56□□□□□ -1.84
HMGB4Q8WW32 AL354950.2-201ENST00000617939 290 ntBASIC3.56□□□□□ -1.84
HMGB4Q8WW32 AL356321.1-201ENST00000621360 228 ntBASIC3.56□□□□□ -1.84
HMGB4Q8WW32 AP003355.3-201ENST00000623465 114 ntBASIC3.56□□□□□ -1.84
HMGB4Q8WW32 U6.114-201ENST00000636407 96 ntBASIC3.56□□□□□ -1.84
HMGB4Q8WW32 MTND1P37-201ENST00000636562 264 ntBASIC3.56□□□□□ -1.84
HMGB4Q8WW32 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
HMGB4Q8WW32 AC004972.1-201ENST00000623934 2209 ntBASIC3.56□□□□□ -1.84
HMGB4Q8WW32 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.56□□□□□ -1.84
HMGB4Q8WW32 ZNF807-201ENST00000328088 1707 ntBASIC3.56□□□□□ -1.84
HMGB4Q8WW32 AC002546.1-201ENST00000588041 2504 ntBASIC3.55□□□□□ -1.84
HMGB4Q8WW32 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
HMGB4Q8WW32 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
HMGB4Q8WW32 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
HMGB4Q8WW32 AC007656.2-201ENST00000624902 4547 ntBASIC3.55□□□□□ -1.84
HMGB4Q8WW32 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.55□□□□□ -1.84
HMGB4Q8WW32 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
HMGB4Q8WW32 RNU6-288P-201ENST00000363690 104 ntBASIC3.55□□□□□ -1.84
HMGB4Q8WW32 RNU6-996P-201ENST00000365438 107 ntBASIC3.55□□□□□ -1.84
HMGB4Q8WW32 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.55□□□□□ -1.84
HMGB4Q8WW32 SNORA69-201ENST00000383895 132 ntBASIC3.55□□□□□ -1.84
HMGB4Q8WW32 RNU6-1029P-201ENST00000384109 107 ntBASIC3.55□□□□□ -1.84
HMGB4Q8WW32 RNU6-190P-201ENST00000384154 102 ntBASIC3.55□□□□□ -1.84
HMGB4Q8WW32 MIR1277-201ENST00000408536 78 ntBASIC3.55□□□□□ -1.84
HMGB4Q8WW32 RNU2-33P-201ENST00000410344 192 ntBASIC3.55□□□□□ -1.84
HMGB4Q8WW32 RNU6-387P-201ENST00000411331 105 ntBASIC3.55□□□□□ -1.84
HMGB4Q8WW32 AC096664.2-201ENST00000411843 406 ntBASIC3.55□□□□□ -1.84
HMGB4Q8WW32 RPS12P24-201ENST00000412619 387 ntBASIC3.55□□□□□ -1.84
HMGB4Q8WW32 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.55□□□□□ -1.84
HMGB4Q8WW32 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC3.55□□□□□ -1.84
HMGB4Q8WW32 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC3.55□□□□□ -1.84
HMGB4Q8WW32 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC3.55□□□□□ -1.84
HMGB4Q8WW32 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.55□□□□□ -1.84
HMGB4Q8WW32 FABP5P13-201ENST00000452144 328 ntBASIC3.55□□□□□ -1.84
HMGB4Q8WW32 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC3.55□□□□□ -1.84
HMGB4Q8WW32 AL162395.1-201ENST00000457882 422 ntBASIC3.55□□□□□ -1.84
HMGB4Q8WW32 U3.44-201ENST00000458938 192 ntBASIC3.55□□□□□ -1.84
HMGB4Q8WW32 RPL7P5-201ENST00000471472 736 ntBASIC3.55□□□□□ -1.84
HMGB4Q8WW32 AC078785.3-201ENST00000476607 425 ntBASIC3.55□□□□□ -1.84
HMGB4Q8WW32 MTAPP1-201ENST00000489154 819 ntBASIC3.55□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms