Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.53□□□□□ -2
CCDC65Q8IXS2 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.53□□□□□ -2
CCDC65Q8IXS2 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.52□□□□□ -2.01
CCDC65Q8IXS2 RNA5SP289-201ENST00000362332 137 ntBASIC2.52□□□□□ -2.01
CCDC65Q8IXS2 RNU1-105P-201ENST00000363470 161 ntBASIC2.52□□□□□ -2.01
CCDC65Q8IXS2 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
CCDC65Q8IXS2 OR5H15-201ENST00000383696 930 ntBASIC2.52□□□□□ -2.01
CCDC65Q8IXS2 RNU6-157P-201ENST00000383957 107 ntBASIC2.52□□□□□ -2.01
CCDC65Q8IXS2 RNU6-217P-201ENST00000384164 104 ntBASIC2.52□□□□□ -2.01
CCDC65Q8IXS2 U3.20-201ENST00000390909 217 ntBASIC2.52□□□□□ -2.01
CCDC65Q8IXS2 RNA5SP354-201ENST00000391247 136 ntBASIC2.52□□□□□ -2.01
CCDC65Q8IXS2 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC2.52□□□□□ -2.01
CCDC65Q8IXS2 AL591416.1-201ENST00000404015 867 ntBASIC2.52□□□□□ -2.01
CCDC65Q8IXS2 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC2.52□□□□□ -2.01
CCDC65Q8IXS2 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.52□□□□□ -2.01
CCDC65Q8IXS2 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC2.52□□□□□ -2.01
CCDC65Q8IXS2 AC013410.2-201ENST00000422627 201 ntBASIC2.52□□□□□ -2.01
CCDC65Q8IXS2 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC2.52□□□□□ -2.01
CCDC65Q8IXS2 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC2.52□□□□□ -2.01
CCDC65Q8IXS2 AC018634.1-201ENST00000437554 401 ntBASIC2.52□□□□□ -2.01
CCDC65Q8IXS2 COX6CP12-201ENST00000446748 202 ntBASIC2.52□□□□□ -2.01
CCDC65Q8IXS2 TPT1P14-201ENST00000448018 505 ntBASIC2.52□□□□□ -2.01
CCDC65Q8IXS2 RNU7-26P-201ENST00000458980 63 ntBASIC2.52□□□□□ -2.01
CCDC65Q8IXS2 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC2.52□□□□□ -2.01
CCDC65Q8IXS2 RPL31P41-201ENST00000477967 372 ntBASIC2.52□□□□□ -2.01
CCDC65Q8IXS2 MTCYBP20-201ENST00000524239 1129 ntBASIC2.52□□□□□ -2.01
CCDC65Q8IXS2 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC2.52□□□□□ -2.01
CCDC65Q8IXS2 AP003122.3-201ENST00000526316 255 ntBASIC2.52□□□□□ -2.01
CCDC65Q8IXS2 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC2.52□□□□□ -2.01
CCDC65Q8IXS2 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.52□□□□□ -2.01
CCDC65Q8IXS2 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
CCDC65Q8IXS2 AC136618.2-201ENST00000575091 400 ntBASIC2.52□□□□□ -2.01
CCDC65Q8IXS2 MIR3117-201ENST00000584034 78 ntBASIC2.52□□□□□ -2.01
CCDC65Q8IXS2 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC2.52□□□□□ -2.01
CCDC65Q8IXS2 AC024933.1-201ENST00000608472 348 ntBASIC2.52□□□□□ -2.01
CCDC65Q8IXS2 HMGB1P24-202ENST00000615653 685 ntBASIC2.52□□□□□ -2.01
CCDC65Q8IXS2 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
CCDC65Q8IXS2 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
CCDC65Q8IXS2 AC022336.2-201ENST00000568966 2538 ntBASIC2.52□□□□□ -2.01
CCDC65Q8IXS2 DDX10P1-201ENST00000448545 1933 ntBASIC2.51□□□□□ -2.01
CCDC65Q8IXS2 RPL21P132-201ENST00000331267 462 ntBASIC2.51□□□□□ -2.01
CCDC65Q8IXS2 SNORA4.1-201ENST00000364263 144 ntBASIC2.51□□□□□ -2.01
CCDC65Q8IXS2 UBE2V1P2-201ENST00000397758 440 ntBASIC2.51□□□□□ -2.01
CCDC65Q8IXS2 SSR1P2-201ENST00000415208 787 ntBASIC2.51□□□□□ -2.01
CCDC65Q8IXS2 AL451054.2-201ENST00000420896 202 ntBASIC2.51□□□□□ -2.01
CCDC65Q8IXS2 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC2.51□□□□□ -2.01
CCDC65Q8IXS2 MTCO3P30-201ENST00000426425 670 ntBASIC2.51□□□□□ -2.01
CCDC65Q8IXS2 Z82210.1-201ENST00000440037 231 ntBASIC2.51□□□□□ -2.01
CCDC65Q8IXS2 PIGFP3-201ENST00000441918 722 ntBASIC2.51□□□□□ -2.01
CCDC65Q8IXS2 MTCYBP3-201ENST00000445588 1137 ntBASIC2.51□□□□□ -2.01
CCDC65Q8IXS2 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC2.51□□□□□ -2.01
CCDC65Q8IXS2 MTND2P24-201ENST00000453434 806 ntBASIC2.51□□□□□ -2.01
CCDC65Q8IXS2 AC091951.3-201ENST00000504093 246 ntBASIC2.51□□□□□ -2.01
CCDC65Q8IXS2 AC093809.1-201ENST00000509155 340 ntBASIC2.51□□□□□ -2.01
CCDC65Q8IXS2 AC093281.2-201ENST00000510153 597 ntBASIC2.51□□□□□ -2.01
CCDC65Q8IXS2 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.51□□□□□ -2.01
CCDC65Q8IXS2 RNA5SP281-201ENST00000516504 135 ntBASIC2.51□□□□□ -2.01
CCDC65Q8IXS2 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC2.51□□□□□ -2.01
CCDC65Q8IXS2 AP000889.2-201ENST00000532684 490 ntBASIC2.51□□□□□ -2.01
CCDC65Q8IXS2 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC2.51□□□□□ -2.01
CCDC65Q8IXS2 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.51□□□□□ -2.01
CCDC65Q8IXS2 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC2.51□□□□□ -2.01
CCDC65Q8IXS2 AC011458.1-201ENST00000604034 617 ntBASIC2.51□□□□□ -2.01
CCDC65Q8IXS2 BCRP9-201ENST00000605312 388 ntBASIC2.51□□□□□ -2.01
CCDC65Q8IXS2 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
CCDC65Q8IXS2 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.51□□□□□ -2.01
CCDC65Q8IXS2 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
CCDC65Q8IXS2 AC093838.1-201ENST00000613014 469 ntBASIC2.51□□□□□ -2.01
CCDC65Q8IXS2 AC012150.2-201ENST00000621300 544 ntBASIC2.51□□□□□ -2.01
CCDC65Q8IXS2 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.51□□□□□ -2.01
CCDC65Q8IXS2 AL137003.2-201ENST00000606924 2538 ntBASIC2.5□□□□□ -2.01
CCDC65Q8IXS2 CR848007.1-201ENST00000442354 1699 ntBASIC2.5□□□□□ -2.01
CCDC65Q8IXS2 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.5□□□□□ -2.01
CCDC65Q8IXS2 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
CCDC65Q8IXS2 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.5□□□□□ -2.01
CCDC65Q8IXS2 RNU6-853P-201ENST00000364306 107 ntBASIC2.5□□□□□ -2.01
CCDC65Q8IXS2 AL355497.1-201ENST00000406262 551 ntBASIC2.5□□□□□ -2.01
CCDC65Q8IXS2 MTCO1P17-201ENST00000411522 491 ntBASIC2.5□□□□□ -2.01
CCDC65Q8IXS2 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
CCDC65Q8IXS2 AL590383.1-201ENST00000428602 75 ntBASIC2.5□□□□□ -2.01
CCDC65Q8IXS2 ZNF736P11Y-201ENST00000442535 1213 ntBASIC2.5□□□□□ -2.01
CCDC65Q8IXS2 ZNF736P12Y-201ENST00000443152 1243 ntBASIC2.5□□□□□ -2.01
CCDC65Q8IXS2 DDX3P2-201ENST00000446138 111 ntBASIC2.5□□□□□ -2.01
CCDC65Q8IXS2 DUXAP8-207ENST00000456786 622 ntBASIC2.5□□□□□ -2.01
CCDC65Q8IXS2 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC2.5□□□□□ -2.01
CCDC65Q8IXS2 AP1S2P1-201ENST00000457344 379 ntBASIC2.5□□□□□ -2.01
CCDC65Q8IXS2 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC2.5□□□□□ -2.01
CCDC65Q8IXS2 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC2.5□□□□□ -2.01
CCDC65Q8IXS2 NDUFB4P2-201ENST00000509515 391 ntBASIC2.5□□□□□ -2.01
CCDC65Q8IXS2 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
CCDC65Q8IXS2 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC2.5□□□□□ -2.01
CCDC65Q8IXS2 MTCYBP43-201ENST00000513621 740 ntBASIC2.5□□□□□ -2.01
CCDC65Q8IXS2 COX6CP5-201ENST00000527162 228 ntBASIC2.5□□□□□ -2.01
CCDC65Q8IXS2 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
CCDC65Q8IXS2 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC2.5□□□□□ -2.01
CCDC65Q8IXS2 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC2.5□□□□□ -2.01
CCDC65Q8IXS2 DUXAP1-201ENST00000556632 463 ntBASIC2.5□□□□□ -2.01
CCDC65Q8IXS2 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC2.5□□□□□ -2.01
CCDC65Q8IXS2 AC060771.1-201ENST00000582031 164 ntBASIC2.5□□□□□ -2.01
CCDC65Q8IXS2 MIR3616-201ENST00000584070 92 ntBASIC2.5□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms