Protein–RNA interactions for Protein: Q86UV5

USP48, Ubiquitin carboxyl-terminal hydrolase 48, humanhuman

Predictions only

Length 1,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP48Q86UV5 AC009093.8-201ENST00000641769 292 ntBASIC5□□□□□ -1.61
USP48Q86UV5 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
USP48Q86UV5 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
USP48Q86UV5 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
USP48Q86UV5 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
USP48Q86UV5 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
USP48Q86UV5 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
USP48Q86UV5 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC4.99□□□□□ -1.61
USP48Q86UV5 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.99□□□□□ -1.61
USP48Q86UV5 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
USP48Q86UV5 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
USP48Q86UV5 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.99□□□□□ -1.61
USP48Q86UV5 SNORA63C-201ENST00000364578 129 ntBASIC4.99□□□□□ -1.61
USP48Q86UV5 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
USP48Q86UV5 Y_RNA.387-201ENST00000383918 102 ntBASIC4.99□□□□□ -1.61
USP48Q86UV5 Y_RNA.399-201ENST00000383955 105 ntBASIC4.99□□□□□ -1.61
USP48Q86UV5 RNU6-393P-201ENST00000384475 107 ntBASIC4.99□□□□□ -1.61
USP48Q86UV5 AL513331.1-201ENST00000411908 397 ntBASIC4.99□□□□□ -1.61
USP48Q86UV5 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC4.99□□□□□ -1.61
USP48Q86UV5 BX682237.1-201ENST00000415016 335 ntBASIC4.99□□□□□ -1.61
USP48Q86UV5 TOMM22P1-201ENST00000418578 312 ntBASIC4.99□□□□□ -1.61
USP48Q86UV5 RNA5SP246-201ENST00000458909 119 ntBASIC4.99□□□□□ -1.61
USP48Q86UV5 RN7SL585P-201ENST00000470538 280 ntBASIC4.99□□□□□ -1.61
USP48Q86UV5 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC4.99□□□□□ -1.61
USP48Q86UV5 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC4.99□□□□□ -1.61
USP48Q86UV5 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC4.99□□□□□ -1.61
USP48Q86UV5 AC093249.1-201ENST00000567049 203 ntBASIC4.99□□□□□ -1.61
USP48Q86UV5 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC4.99□□□□□ -1.61
USP48Q86UV5 MIR3942-201ENST00000585264 109 ntBASIC4.99□□□□□ -1.61
USP48Q86UV5 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC4.99□□□□□ -1.61
USP48Q86UV5 AC064801.1-201ENST00000612025 407 ntBASIC4.99□□□□□ -1.61
USP48Q86UV5 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
USP48Q86UV5 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC4.99□□□□□ -1.61
USP48Q86UV5 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
USP48Q86UV5 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
USP48Q86UV5 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
USP48Q86UV5 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC4.98□□□□□ -1.61
USP48Q86UV5 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.98□□□□□ -1.61
USP48Q86UV5 RNU6-715P-201ENST00000365204 103 ntBASIC4.98□□□□□ -1.61
USP48Q86UV5 RNU6-213P-201ENST00000384051 104 ntBASIC4.98□□□□□ -1.61
USP48Q86UV5 RNU6-474P-201ENST00000384243 107 ntBASIC4.98□□□□□ -1.61
USP48Q86UV5 RNU6-434P-201ENST00000384376 107 ntBASIC4.98□□□□□ -1.61
USP48Q86UV5 AL139039.1-201ENST00000401900 692 ntBASIC4.98□□□□□ -1.61
USP48Q86UV5 HSPE1P8-201ENST00000406997 288 ntBASIC4.98□□□□□ -1.61
USP48Q86UV5 RNA5SP306-201ENST00000411087 107 ntBASIC4.98□□□□□ -1.61
USP48Q86UV5 RPS12P24-201ENST00000412619 387 ntBASIC4.98□□□□□ -1.61
USP48Q86UV5 ACTR3BP6-201ENST00000422332 1241 ntBASIC4.98□□□□□ -1.61
USP48Q86UV5 RPL23AP31-201ENST00000456160 467 ntBASIC4.98□□□□□ -1.61
USP48Q86UV5 DYNLL1P5-201ENST00000467158 270 ntBASIC4.98□□□□□ -1.61
USP48Q86UV5 RNU6-927P-201ENST00000516199 100 ntBASIC4.98□□□□□ -1.61
USP48Q86UV5 SNORA70.24-201ENST00000517233 118 ntBASIC4.98□□□□□ -1.61
USP48Q86UV5 IGKV2D-23-201ENST00000518179 286 ntBASIC4.98□□□□□ -1.61
USP48Q86UV5 IL7-206ENST00000520269 456 ntTSL 3 BASIC4.98□□□□□ -1.61
USP48Q86UV5 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
USP48Q86UV5 SNRPGP16-201ENST00000533275 226 ntBASIC4.98□□□□□ -1.61
USP48Q86UV5 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC4.98□□□□□ -1.61
USP48Q86UV5 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC4.98□□□□□ -1.61
USP48Q86UV5 AC022655.2-201ENST00000577280 318 ntBASIC4.98□□□□□ -1.61
USP48Q86UV5 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC4.98□□□□□ -1.61
USP48Q86UV5 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC4.98□□□□□ -1.61
USP48Q86UV5 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
USP48Q86UV5 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
USP48Q86UV5 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
USP48Q86UV5 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
USP48Q86UV5 PNPT1P2-201ENST00000456768 2050 ntBASIC4.97□□□□□ -1.61
USP48Q86UV5 ZNF285B-201ENST00000561698 1767 ntBASIC4.97□□□□□ -1.61
USP48Q86UV5 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
USP48Q86UV5 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
USP48Q86UV5 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
USP48Q86UV5 RNU6-1252P-201ENST00000363054 104 ntBASIC4.97□□□□□ -1.61
USP48Q86UV5 IARS-201ENST00000375627 697 ntTSL 3 BASIC4.97□□□□□ -1.61
USP48Q86UV5 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
USP48Q86UV5 SNORA16.2-201ENST00000390991 127 ntBASIC4.97□□□□□ -1.61
USP48Q86UV5 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC4.97□□□□□ -1.61
USP48Q86UV5 AL160275.3-201ENST00000423876 471 ntBASIC4.97□□□□□ -1.61
USP48Q86UV5 AL691449.1-201ENST00000426570 421 ntBASIC4.97□□□□□ -1.61
USP48Q86UV5 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC4.97□□□□□ -1.61
USP48Q86UV5 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC4.97□□□□□ -1.61
USP48Q86UV5 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC4.97□□□□□ -1.61
USP48Q86UV5 RPL23AP89-201ENST00000439324 255 ntBASIC4.97□□□□□ -1.61
USP48Q86UV5 RNU7-167P-201ENST00000459160 62 ntBASIC4.97□□□□□ -1.61
USP48Q86UV5 SNORD19B-201ENST00000459623 84 ntBASIC4.97□□□□□ -1.61
USP48Q86UV5 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC4.97□□□□□ -1.61
USP48Q86UV5 AL049874.1-201ENST00000489560 388 ntBASIC4.97□□□□□ -1.61
USP48Q86UV5 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC4.97□□□□□ -1.61
USP48Q86UV5 AC017037.1-201ENST00000508460 471 ntBASIC4.97□□□□□ -1.61
USP48Q86UV5 RNU6-273P-201ENST00000516937 96 ntBASIC4.97□□□□□ -1.61
USP48Q86UV5 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC4.97□□□□□ -1.61
USP48Q86UV5 AC135001.1-201ENST00000544546 283 ntBASIC4.97□□□□□ -1.61
USP48Q86UV5 AC090115.3-201ENST00000553218 849 ntBASIC4.97□□□□□ -1.61
USP48Q86UV5 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC4.97□□□□□ -1.61
USP48Q86UV5 AC022968.1-201ENST00000567372 442 ntBASIC4.97□□□□□ -1.61
USP48Q86UV5 MIR3671-201ENST00000580455 88 ntBASIC4.97□□□□□ -1.61
USP48Q86UV5 MIR3171-201ENST00000584270 74 ntBASIC4.97□□□□□ -1.61
USP48Q86UV5 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC4.97□□□□□ -1.61
USP48Q86UV5 AC104662.1-201ENST00000604448 511 ntBASIC4.97□□□□□ -1.61
USP48Q86UV5 AL391261.4-201ENST00000616012 481 ntBASIC4.97□□□□□ -1.61
USP48Q86UV5 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC4.97□□□□□ -1.61
USP48Q86UV5 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
USP48Q86UV5 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.97□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms