Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC4.85□□□□□ -1.63
RNF43Q68DV7 AC140479.3-201ENST00000418944 1126 ntBASIC4.85□□□□□ -1.63
RNF43Q68DV7 AP000936.3-201ENST00000438127 255 ntBASIC4.85□□□□□ -1.63
RNF43Q68DV7 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC4.85□□□□□ -1.63
RNF43Q68DV7 RPEP5-201ENST00000441137 268 ntBASIC4.85□□□□□ -1.63
RNF43Q68DV7 AC079168.2-201ENST00000453977 416 ntBASIC4.85□□□□□ -1.63
RNF43Q68DV7 RNU7-138P-201ENST00000459479 64 ntBASIC4.85□□□□□ -1.63
RNF43Q68DV7 SNORA31.6-201ENST00000516241 130 ntBASIC4.85□□□□□ -1.63
RNF43Q68DV7 SNORA25.14-201ENST00000516481 132 ntBASIC4.85□□□□□ -1.63
RNF43Q68DV7 Y_RNA.683-201ENST00000516508 93 ntBASIC4.85□□□□□ -1.63
RNF43Q68DV7 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.85□□□□□ -1.63
RNF43Q68DV7 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
RNF43Q68DV7 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC4.85□□□□□ -1.63
RNF43Q68DV7 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC4.85□□□□□ -1.63
RNF43Q68DV7 FKBP1BP1-201ENST00000553366 325 ntBASIC4.85□□□□□ -1.63
RNF43Q68DV7 MIR4273-201ENST00000582824 84 ntBASIC4.85□□□□□ -1.63
RNF43Q68DV7 AC012119.1-201ENST00000603184 222 ntBASIC4.85□□□□□ -1.63
RNF43Q68DV7 AC004832.4-201ENST00000608952 331 ntBASIC4.85□□□□□ -1.63
RNF43Q68DV7 DLEU2_2.2-201ENST00000615474 90 ntBASIC4.85□□□□□ -1.63
RNF43Q68DV7 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
RNF43Q68DV7 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.85□□□□□ -1.63
RNF43Q68DV7 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
RNF43Q68DV7 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
RNF43Q68DV7 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC4.85□□□□□ -1.63
RNF43Q68DV7 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
RNF43Q68DV7 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.84□□□□□ -1.63
RNF43Q68DV7 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
RNF43Q68DV7 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.63
RNF43Q68DV7 SLC2A3P1-201ENST00000519666 1451 ntBASIC4.84□□□□□ -1.63
RNF43Q68DV7 MAPK10-303ENST00000641324 3959 ntBASIC4.84□□□□□ -1.63
RNF43Q68DV7 RNU1-108P-201ENST00000362556 161 ntBASIC4.84□□□□□ -1.63
RNF43Q68DV7 RNU6-1303P-201ENST00000364841 107 ntBASIC4.84□□□□□ -1.63
RNF43Q68DV7 RNU1-64P-201ENST00000365443 163 ntBASIC4.84□□□□□ -1.63
RNF43Q68DV7 RNU6-701P-201ENST00000384059 107 ntBASIC4.84□□□□□ -1.63
RNF43Q68DV7 AL591704.1-201ENST00000432574 275 ntBASIC4.84□□□□□ -1.63
RNF43Q68DV7 AC022034.3-201ENST00000471393 478 ntBASIC4.84□□□□□ -1.63
RNF43Q68DV7 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.84□□□□□ -1.63
RNF43Q68DV7 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.84□□□□□ -1.63
RNF43Q68DV7 RFPL4AP5-201ENST00000514977 504 ntBASIC4.84□□□□□ -1.63
RNF43Q68DV7 Y_RNA.689-201ENST00000516589 107 ntBASIC4.84□□□□□ -1.63
RNF43Q68DV7 IGKV2-23-201ENST00000518729 323 ntBASIC4.84□□□□□ -1.63
RNF43Q68DV7 AC100870.1-201ENST00000522035 505 ntBASIC4.84□□□□□ -1.63
RNF43Q68DV7 AC087441.2-201ENST00000529141 262 ntBASIC4.84□□□□□ -1.63
RNF43Q68DV7 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.84□□□□□ -1.63
RNF43Q68DV7 CBX3P4-201ENST00000538909 354 ntBASIC4.84□□□□□ -1.63
RNF43Q68DV7 MEG8-215ENST00000555354 469 ntTSL 3 BASIC4.84□□□□□ -1.63
RNF43Q68DV7 VN1R85P-201ENST00000601587 426 ntBASIC4.84□□□□□ -1.63
RNF43Q68DV7 AC005191.1-201ENST00000603950 358 ntBASIC4.84□□□□□ -1.63
RNF43Q68DV7 AC025588.3-201ENST00000604182 274 ntBASIC4.84□□□□□ -1.63
RNF43Q68DV7 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.84□□□□□ -1.63
RNF43Q68DV7 SNHG22-203ENST00000617833 660 ntBASIC4.84□□□□□ -1.63
RNF43Q68DV7 AC091953.5-201ENST00000622919 233 ntBASIC4.84□□□□□ -1.63
RNF43Q68DV7 AC011944.2-201ENST00000624440 683 ntBASIC4.84□□□□□ -1.63
RNF43Q68DV7 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.84□□□□□ -1.63
RNF43Q68DV7 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.84□□□□□ -1.63
RNF43Q68DV7 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.64
RNF43Q68DV7 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.84□□□□□ -1.64
RNF43Q68DV7 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
RNF43Q68DV7 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.84□□□□□ -1.64
RNF43Q68DV7 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC4.83□□□□□ -1.64
RNF43Q68DV7 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
RNF43Q68DV7 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
RNF43Q68DV7 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
RNF43Q68DV7 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
RNF43Q68DV7 RNU4-44P-201ENST00000363050 141 ntBASIC4.83□□□□□ -1.64
RNF43Q68DV7 RNU1-130P-201ENST00000363930 160 ntBASIC4.83□□□□□ -1.64
RNF43Q68DV7 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC4.83□□□□□ -1.64
RNF43Q68DV7 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
RNF43Q68DV7 AL359837.1-201ENST00000381357 287 ntBASIC4.83□□□□□ -1.64
RNF43Q68DV7 RNU6-708P-201ENST00000384217 107 ntBASIC4.83□□□□□ -1.64
RNF43Q68DV7 RNU6-790P-201ENST00000384479 105 ntBASIC4.83□□□□□ -1.64
RNF43Q68DV7 RNU1-82P-201ENST00000390851 165 ntBASIC4.83□□□□□ -1.64
RNF43Q68DV7 MIR921-201ENST00000401133 56 ntBASIC4.83□□□□□ -1.64
RNF43Q68DV7 RN7SKP267-201ENST00000410381 285 ntBASIC4.83□□□□□ -1.64
RNF43Q68DV7 EIF4EP2-201ENST00000422816 654 ntBASIC4.83□□□□□ -1.64
RNF43Q68DV7 GAS5-208ENST00000425771 242 ntTSL 3 BASIC4.83□□□□□ -1.64
RNF43Q68DV7 Z95327.1-201ENST00000446082 482 ntBASIC4.83□□□□□ -1.64
RNF43Q68DV7 H2AFZP5-201ENST00000446960 382 ntBASIC4.83□□□□□ -1.64
RNF43Q68DV7 GAPDHP27-201ENST00000447427 1020 ntBASIC4.83□□□□□ -1.64
RNF43Q68DV7 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
RNF43Q68DV7 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC4.83□□□□□ -1.64
RNF43Q68DV7 AL136097.1-201ENST00000456945 913 ntBASIC4.83□□□□□ -1.64
RNF43Q68DV7 RNU6-1218P-201ENST00000458990 108 ntBASIC4.83□□□□□ -1.64
RNF43Q68DV7 RNU7-120P-201ENST00000459334 63 ntBASIC4.83□□□□□ -1.64
RNF43Q68DV7 AC006511.1-201ENST00000470614 315 ntBASIC4.83□□□□□ -1.64
RNF43Q68DV7 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC4.83□□□□□ -1.64
RNF43Q68DV7 RN7SKP82-201ENST00000516786 223 ntBASIC4.83□□□□□ -1.64
RNF43Q68DV7 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC4.83□□□□□ -1.64
RNF43Q68DV7 AC092470.1-201ENST00000546187 132 ntBASIC4.83□□□□□ -1.64
RNF43Q68DV7 AC004024.1-201ENST00000549244 247 ntBASIC4.83□□□□□ -1.64
RNF43Q68DV7 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC4.83□□□□□ -1.64
RNF43Q68DV7 MIR3939-201ENST00000582614 106 ntBASIC4.83□□□□□ -1.64
RNF43Q68DV7 AC008785.1-201ENST00000624475 456 ntBASIC4.83□□□□□ -1.64
RNF43Q68DV7 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
RNF43Q68DV7 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
RNF43Q68DV7 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
RNF43Q68DV7 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
RNF43Q68DV7 AL031119.1-201ENST00000404707 1879 ntBASIC4.83□□□□□ -1.64
RNF43Q68DV7 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
RNF43Q68DV7 AC022893.2-201ENST00000564832 3296 ntBASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms