Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.33□□□□□ -1.88
LTBQ06643 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.33□□□□□ -1.88
LTBQ06643 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC3.33□□□□□ -1.88
LTBQ06643 Y_RNA.67-201ENST00000362870 100 ntBASIC3.33□□□□□ -1.88
LTBQ06643 SNORA62.1-201ENST00000364287 154 ntBASIC3.33□□□□□ -1.88
LTBQ06643 SNORA51.2-201ENST00000364595 132 ntBASIC3.33□□□□□ -1.88
LTBQ06643 RNA5SP267-201ENST00000364893 126 ntBASIC3.33□□□□□ -1.88
LTBQ06643 Y_RNA.460-201ENST00000384255 102 ntBASIC3.33□□□□□ -1.88
LTBQ06643 RNU6-278P-201ENST00000390945 109 ntBASIC3.33□□□□□ -1.88
LTBQ06643 CD3D-202ENST00000392884 476 ntTSL 2 BASIC3.33□□□□□ -1.88
LTBQ06643 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC3.33□□□□□ -1.88
LTBQ06643 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.33□□□□□ -1.88
LTBQ06643 NDUFB4P5-201ENST00000415445 361 ntBASIC3.33□□□□□ -1.88
LTBQ06643 AL354751.2-201ENST00000415471 210 ntBASIC3.33□□□□□ -1.88
LTBQ06643 RPS7P15-201ENST00000415804 584 ntBASIC3.33□□□□□ -1.88
LTBQ06643 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC3.33□□□□□ -1.88
LTBQ06643 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC3.33□□□□□ -1.88
LTBQ06643 AC002075.2-201ENST00000425207 252 ntBASIC3.33□□□□□ -1.88
LTBQ06643 AL591419.1-201ENST00000427423 339 ntBASIC3.33□□□□□ -1.88
LTBQ06643 OR2AS1P-201ENST00000427827 319 ntBASIC3.33□□□□□ -1.88
LTBQ06643 AL365400.1-201ENST00000431854 640 ntBASIC3.33□□□□□ -1.88
LTBQ06643 IFNA20P-201ENST00000436840 528 ntBASIC3.33□□□□□ -1.88
LTBQ06643 AC233279.1-201ENST00000455300 423 ntBASIC3.33□□□□□ -1.88
LTBQ06643 SNRPGP5-201ENST00000456003 220 ntBASIC3.33□□□□□ -1.88
LTBQ06643 RNU7-59P-201ENST00000459101 61 ntBASIC3.33□□□□□ -1.88
LTBQ06643 AP000873.1-201ENST00000463987 400 ntBASIC3.33□□□□□ -1.88
LTBQ06643 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC3.33□□□□□ -1.88
LTBQ06643 AC106707.2-201ENST00000484182 374 ntBASIC3.33□□□□□ -1.88
LTBQ06643 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC3.33□□□□□ -1.88
LTBQ06643 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
LTBQ06643 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC3.33□□□□□ -1.88
LTBQ06643 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3.33□□□□□ -1.88
LTBQ06643 TTC39CP1-201ENST00000512513 755 ntBASIC3.33□□□□□ -1.88
LTBQ06643 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC3.33□□□□□ -1.88
LTBQ06643 RNU4-49P-201ENST00000516080 140 ntBASIC3.33□□□□□ -1.88
LTBQ06643 RNU4ATAC8P-201ENST00000516196 109 ntBASIC3.33□□□□□ -1.88
LTBQ06643 RN7SKP219-201ENST00000516825 296 ntBASIC3.33□□□□□ -1.88
LTBQ06643 RNU6-1314P-201ENST00000517139 104 ntBASIC3.33□□□□□ -1.88
LTBQ06643 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC3.33□□□□□ -1.88
LTBQ06643 AC007991.1-201ENST00000522680 631 ntBASIC3.33□□□□□ -1.88
LTBQ06643 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC3.33□□□□□ -1.88
LTBQ06643 AC008489.1-201ENST00000524271 483 ntBASIC3.33□□□□□ -1.88
LTBQ06643 AC011979.2-201ENST00000527568 352 ntBASIC3.33□□□□□ -1.88
LTBQ06643 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
LTBQ06643 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
LTBQ06643 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC3.33□□□□□ -1.88
LTBQ06643 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC3.33□□□□□ -1.88
LTBQ06643 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.33□□□□□ -1.88
LTBQ06643 KLKP1-201ENST00000595979 403 ntBASIC3.33□□□□□ -1.88
LTBQ06643 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.33□□□□□ -1.88
LTBQ06643 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.33□□□□□ -1.88
LTBQ06643 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.33□□□□□ -1.88
LTBQ06643 AC126177.8-201ENST00000618339 1015 ntBASIC3.33□□□□□ -1.88
LTBQ06643 U7.8-201ENST00000619968 63 ntBASIC3.33□□□□□ -1.88
LTBQ06643 RMST_7.1-201ENST00000621935 268 ntBASIC3.33□□□□□ -1.88
LTBQ06643 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
LTBQ06643 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.33□□□□□ -1.88
LTBQ06643 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.33□□□□□ -1.88
LTBQ06643 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.33□□□□□ -1.88
LTBQ06643 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
LTBQ06643 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.33□□□□□ -1.88
LTBQ06643 AC004972.1-201ENST00000623934 2209 ntBASIC3.32□□□□□ -1.88
LTBQ06643 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
LTBQ06643 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
LTBQ06643 HSPE1P11-201ENST00000339579 310 ntBASIC3.32□□□□□ -1.88
LTBQ06643 Y_RNA.184-201ENST00000363884 108 ntBASIC3.32□□□□□ -1.88
LTBQ06643 RNU6-1078P-201ENST00000364522 103 ntBASIC3.32□□□□□ -1.88
LTBQ06643 MIR514A2-201ENST00000385131 88 ntBASIC3.32□□□□□ -1.88
LTBQ06643 MIR514A3-201ENST00000385132 88 ntBASIC3.32□□□□□ -1.88
LTBQ06643 MT-TC-201ENST00000387405 66 ntBASIC3.32□□□□□ -1.88
LTBQ06643 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
LTBQ06643 RNU6-510P-201ENST00000391239 108 ntBASIC3.32□□□□□ -1.88
LTBQ06643 RNU2-36P-201ENST00000410361 191 ntBASIC3.32□□□□□ -1.88
LTBQ06643 MTND3P8-201ENST00000412909 339 ntBASIC3.32□□□□□ -1.88
LTBQ06643 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC3.32□□□□□ -1.88
LTBQ06643 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC3.32□□□□□ -1.88
LTBQ06643 AL645937.1-202ENST00000421799 937 ntBASIC3.32□□□□□ -1.88
LTBQ06643 MED13P1-201ENST00000428342 171 ntBASIC3.32□□□□□ -1.88
LTBQ06643 CKS1BP5-201ENST00000434172 273 ntBASIC3.32□□□□□ -1.88
LTBQ06643 AC024082.2-201ENST00000434771 238 ntBASIC3.32□□□□□ -1.88
LTBQ06643 RPS29P31-201ENST00000446147 164 ntBASIC3.32□□□□□ -1.88
LTBQ06643 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.32□□□□□ -1.88
LTBQ06643 AL133162.1-201ENST00000463228 453 ntBASIC3.32□□□□□ -1.88
LTBQ06643 MRPS17P3-201ENST00000465453 385 ntBASIC3.32□□□□□ -1.88
LTBQ06643 HMGB1P25-201ENST00000468402 607 ntBASIC3.32□□□□□ -1.88
LTBQ06643 HMGN1P10-201ENST00000474557 553 ntBASIC3.32□□□□□ -1.88
LTBQ06643 AC135721.1-201ENST00000497954 479 ntBASIC3.32□□□□□ -1.88
LTBQ06643 AC116562.3-201ENST00000506136 177 ntBASIC3.32□□□□□ -1.88
LTBQ06643 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC3.32□□□□□ -1.88
LTBQ06643 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.32□□□□□ -1.88
LTBQ06643 RNU6-64P-201ENST00000517119 105 ntBASIC3.32□□□□□ -1.88
LTBQ06643 AC068587.5-201ENST00000528506 175 ntBASIC3.32□□□□□ -1.88
LTBQ06643 AC087241.2-201ENST00000535801 324 ntBASIC3.32□□□□□ -1.88
LTBQ06643 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC3.32□□□□□ -1.88
LTBQ06643 PSMA3P-201ENST00000555485 635 ntBASIC3.32□□□□□ -1.88
LTBQ06643 MIR4742-201ENST00000581069 85 ntBASIC3.32□□□□□ -1.88
LTBQ06643 AC010928.3-201ENST00000587712 541 ntBASIC3.32□□□□□ -1.88
LTBQ06643 AC244505.7-201ENST00000599675 272 ntBASIC3.32□□□□□ -1.88
LTBQ06643 RNVU1-4-201ENST00000612985 164 ntBASIC3.32□□□□□ -1.88
LTBQ06643 MIR1302-1-201ENST00000637932 143 ntBASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 111.7 ms