Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 DPPA2P1-201ENST00000428060 556 ntBASIC2.82□□□□□ -1.96
SHC1P29353 TIMM9P3-201ENST00000428659 274 ntBASIC2.82□□□□□ -1.96
SHC1P29353 HMGB1P31-201ENST00000437242 427 ntBASIC2.82□□□□□ -1.96
SHC1P29353 AC112653.1-201ENST00000443851 386 ntBASIC2.82□□□□□ -1.96
SHC1P29353 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC2.82□□□□□ -1.96
SHC1P29353 ELOCP23-201ENST00000452014 332 ntBASIC2.82□□□□□ -1.96
SHC1P29353 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
SHC1P29353 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC2.82□□□□□ -1.96
SHC1P29353 PRDX4P1-201ENST00000507189 574 ntBASIC2.82□□□□□ -1.96
SHC1P29353 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC2.82□□□□□ -1.96
SHC1P29353 AC105914.1-201ENST00000511798 226 ntBASIC2.82□□□□□ -1.96
SHC1P29353 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC2.82□□□□□ -1.96
SHC1P29353 Vault.3-201ENST00000516676 95 ntBASIC2.82□□□□□ -1.96
SHC1P29353 RN7SKP57-201ENST00000517248 293 ntBASIC2.82□□□□□ -1.96
SHC1P29353 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC2.82□□□□□ -1.96
SHC1P29353 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC2.82□□□□□ -1.96
SHC1P29353 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC2.82□□□□□ -1.96
SHC1P29353 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC2.82□□□□□ -1.96
SHC1P29353 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC2.82□□□□□ -1.96
SHC1P29353 AL121603.1-201ENST00000553815 142 ntBASIC2.82□□□□□ -1.96
SHC1P29353 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC2.82□□□□□ -1.96
SHC1P29353 MIR3146-201ENST00000580367 79 ntBASIC2.82□□□□□ -1.96
SHC1P29353 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC2.82□□□□□ -1.96
SHC1P29353 MIR4506-201ENST00000584693 77 ntBASIC2.82□□□□□ -1.96
SHC1P29353 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC2.82□□□□□ -1.96
SHC1P29353 AL161756.2-201ENST00000604597 246 ntBASIC2.82□□□□□ -1.96
SHC1P29353 AC121334.2-201ENST00000605387 271 ntBASIC2.82□□□□□ -1.96
SHC1P29353 AP001596.2-201ENST00000608410 312 ntBASIC2.82□□□□□ -1.96
SHC1P29353 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC2.82□□□□□ -1.96
SHC1P29353 AC004067.1-201ENST00000608733 700 ntBASIC2.82□□□□□ -1.96
SHC1P29353 AL590099.1-201ENST00000615276 138 ntBASIC2.82□□□□□ -1.96
SHC1P29353 AC002553.4-201ENST00000616896 331 ntBASIC2.82□□□□□ -1.96
SHC1P29353 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
SHC1P29353 U6.42-201ENST00000618440 107 ntBASIC2.82□□□□□ -1.96
SHC1P29353 MIR8057-201ENST00000620957 69 ntBASIC2.82□□□□□ -1.96
SHC1P29353 AC112204.3-201ENST00000623822 332 ntBASIC2.82□□□□□ -1.96
SHC1P29353 AL136164.4-201ENST00000625013 2135 ntBASIC2.82□□□□□ -1.96
SHC1P29353 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC2.82□□□□□ -1.96
SHC1P29353 SRP54-214ENST00000630962 162 ntTSL 5 BASIC2.82□□□□□ -1.96
SHC1P29353 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC2.82□□□□□ -1.96
SHC1P29353 OR1S2-201ENST00000302592 978 ntBASIC2.81□□□□□ -1.96
SHC1P29353 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
SHC1P29353 RNU6-1249P-201ENST00000363237 111 ntBASIC2.81□□□□□ -1.96
SHC1P29353 RNU5E-4P-201ENST00000364931 120 ntBASIC2.81□□□□□ -1.96
SHC1P29353 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
SHC1P29353 U3.20-201ENST00000390909 217 ntBASIC2.81□□□□□ -1.96
SHC1P29353 RNU2-47P-201ENST00000410649 186 ntBASIC2.81□□□□□ -1.96
SHC1P29353 RN7SKP123-201ENST00000410732 291 ntBASIC2.81□□□□□ -1.96
SHC1P29353 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC2.81□□□□□ -1.96
SHC1P29353 AL109913.1-201ENST00000421173 514 ntBASIC2.81□□□□□ -1.96
SHC1P29353 MTCO1P20-201ENST00000425366 358 ntBASIC2.81□□□□□ -1.96
SHC1P29353 ELOCP14-201ENST00000428070 331 ntBASIC2.81□□□□□ -1.96
SHC1P29353 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC2.81□□□□□ -1.96
SHC1P29353 ELOCP7-201ENST00000439968 331 ntBASIC2.81□□□□□ -1.96
SHC1P29353 USP9YP15-201ENST00000442391 422 ntBASIC2.81□□□□□ -1.96
SHC1P29353 RPS3AP12-201ENST00000443616 753 ntBASIC2.81□□□□□ -1.96
SHC1P29353 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC2.81□□□□□ -1.96
SHC1P29353 GAPDHP27-201ENST00000447427 1020 ntBASIC2.81□□□□□ -1.96
SHC1P29353 MTND2P24-201ENST00000453434 806 ntBASIC2.81□□□□□ -1.96
SHC1P29353 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC2.81□□□□□ -1.96
SHC1P29353 SNORD121B-201ENST00000458838 81 ntBASIC2.81□□□□□ -1.96
SHC1P29353 snoU13.4-201ENST00000458916 104 ntBASIC2.81□□□□□ -1.96
SHC1P29353 HMGB1P25-201ENST00000468402 607 ntBASIC2.81□□□□□ -1.96
SHC1P29353 RPL31P58-201ENST00000469001 379 ntBASIC2.81□□□□□ -1.96
SHC1P29353 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC2.81□□□□□ -1.96
SHC1P29353 RPS27AP1-201ENST00000475545 471 ntBASIC2.81□□□□□ -1.96
SHC1P29353 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
SHC1P29353 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC2.81□□□□□ -1.96
SHC1P29353 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC2.81□□□□□ -1.96
SHC1P29353 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC2.81□□□□□ -1.96
SHC1P29353 AC074344.1-201ENST00000512823 224 ntBASIC2.81□□□□□ -1.96
SHC1P29353 AC010493.1-201ENST00000513479 292 ntBASIC2.81□□□□□ -1.96
SHC1P29353 AC022616.3-201ENST00000523940 148 ntBASIC2.81□□□□□ -1.96
SHC1P29353 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC2.81□□□□□ -1.96
SHC1P29353 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC2.81□□□□□ -1.96
SHC1P29353 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC2.81□□□□□ -1.96
SHC1P29353 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC2.81□□□□□ -1.96
SHC1P29353 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC2.81□□□□□ -1.96
SHC1P29353 AL136363.1-201ENST00000605349 337 ntBASIC2.81□□□□□ -1.96
SHC1P29353 AC104458.1-201ENST00000608243 463 ntBASIC2.81□□□□□ -1.96
SHC1P29353 AC006329.2-201ENST00000611491 394 ntBASIC2.81□□□□□ -1.96
SHC1P29353 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
SHC1P29353 AC019226.1-201ENST00000625666 515 ntBASIC2.81□□□□□ -1.96
SHC1P29353 PCNP-208ENST00000627393 136 ntTSL 2 BASIC2.81□□□□□ -1.96
SHC1P29353 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC2.81□□□□□ -1.96
SHC1P29353 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC2.81□□□□□ -1.96
SHC1P29353 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
SHC1P29353 AL353743.1-202ENST00000431724 1695 ntBASIC2.81□□□□□ -1.96
SHC1P29353 AC011460.1-201ENST00000636268 1834 ntBASIC2.81□□□□□ -1.96
SHC1P29353 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC2.81□□□□□ -1.96
SHC1P29353 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC2.8□□□□□ -1.96
SHC1P29353 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
SHC1P29353 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC2.8□□□□□ -1.96
SHC1P29353 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC2.8□□□□□ -1.96
SHC1P29353 AC009902.3-201ENST00000606235 2172 ntBASIC2.8□□□□□ -1.96
SHC1P29353 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
SHC1P29353 AC244517.1-201ENST00000606030 2086 ntBASIC2.8□□□□□ -1.96
SHC1P29353 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC2.8□□□□□ -1.96
SHC1P29353 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.8□□□□□ -1.96
SHC1P29353 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.8□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms