Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.83□□□□□ -2.28
SPTA1P02549 RNU1-62P-201ENST00000362599 164 ntBASIC0.83□□□□□ -2.28
SPTA1P02549 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC0.83□□□□□ -2.28
SPTA1P02549 AL034374.1-201ENST00000406329 351 ntBASIC0.83□□□□□ -2.28
SPTA1P02549 SSR1P1-201ENST00000407630 814 ntBASIC0.83□□□□□ -2.28
SPTA1P02549 UBE2V1P9-201ENST00000414760 368 ntBASIC0.83□□□□□ -2.28
SPTA1P02549 LARP7P4-201ENST00000481075 878 ntBASIC0.83□□□□□ -2.28
SPTA1P02549 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC0.83□□□□□ -2.28
SPTA1P02549 MTCO2P32-201ENST00000514865 403 ntBASIC0.83□□□□□ -2.28
SPTA1P02549 CASP1P1-201ENST00000526345 212 ntBASIC0.83□□□□□ -2.28
SPTA1P02549 AC022690.1-201ENST00000526681 550 ntBASIC0.83□□□□□ -2.28
SPTA1P02549 AC084373.1-201ENST00000603311 235 ntBASIC0.83□□□□□ -2.28
SPTA1P02549 SNORD114-21-201ENST00000606412 72 ntBASIC0.83□□□□□ -2.28
SPTA1P02549 AL138880.2-201ENST00000616214 239 ntBASIC0.83□□□□□ -2.28
SPTA1P02549 AC068620.4-201ENST00000636730 1182 ntBASIC0.83□□□□□ -2.28
SPTA1P02549 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC0.82□□□□□ -2.28
SPTA1P02549 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.82□□□□□ -2.28
SPTA1P02549 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
SPTA1P02549 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC0.82□□□□□ -2.28
SPTA1P02549 AC099548.1-201ENST00000421443 426 ntBASIC0.82□□□□□ -2.28
SPTA1P02549 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC0.82□□□□□ -2.28
SPTA1P02549 PMCHL2-203ENST00000457791 237 ntBASIC0.82□□□□□ -2.28
SPTA1P02549 RNU1-61P-201ENST00000516107 151 ntBASIC0.82□□□□□ -2.28
SPTA1P02549 AC008269.2-201ENST00000561915 1105 ntBASIC0.82□□□□□ -2.28
SPTA1P02549 MIR6835-201ENST00000621552 64 ntBASIC0.82□□□□□ -2.28
SPTA1P02549 AC067863.3-201ENST00000624172 122 ntBASIC0.82□□□□□ -2.28
SPTA1P02549 MIR4496-201ENST00000635896 61 ntBASIC0.82□□□□□ -2.28
SPTA1P02549 DBF4P1-201ENST00000412976 1892 ntBASIC0.82□□□□□ -2.28
SPTA1P02549 SDAD1P2-201ENST00000441308 2028 ntBASIC0.82□□□□□ -2.28
SPTA1P02549 AC121333.1-201ENST00000567488 2709 ntBASIC0.82□□□□□ -2.28
SPTA1P02549 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
SPTA1P02549 IL33-202ENST00000417746 2327 ntTSL 2 BASIC0.82□□□□□ -2.28
SPTA1P02549 RNA5SP347-201ENST00000362445 119 ntBASIC0.81□□□□□ -2.28
SPTA1P02549 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
SPTA1P02549 MIR493-201ENST00000385254 89 ntBASIC0.81□□□□□ -2.28
SPTA1P02549 RNU2-70P-201ENST00000410718 179 ntBASIC0.81□□□□□ -2.28
SPTA1P02549 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC0.81□□□□□ -2.28
SPTA1P02549 HMGN2P30-201ENST00000423237 256 ntBASIC0.81□□□□□ -2.28
SPTA1P02549 AC093155.1-201ENST00000440164 826 ntBASIC0.81□□□□□ -2.28
SPTA1P02549 AC004854.1-201ENST00000440356 349 ntBASIC0.81□□□□□ -2.28
SPTA1P02549 HMGN2P10-201ENST00000448085 265 ntBASIC0.81□□□□□ -2.28
SPTA1P02549 RPS27P1-201ENST00000450552 247 ntBASIC0.81□□□□□ -2.28
SPTA1P02549 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC0.81□□□□□ -2.28
SPTA1P02549 OR10V3P-201ENST00000525712 725 ntBASIC0.81□□□□□ -2.28
SPTA1P02549 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC0.81□□□□□ -2.28
SPTA1P02549 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC0.81□□□□□ -2.28
SPTA1P02549 MIR3690-201ENST00000580266 75 ntBASIC0.81□□□□□ -2.28
SPTA1P02549 AC025594.3-201ENST00000613068 790 ntBASIC0.81□□□□□ -2.28
SPTA1P02549 AC011330.2-201ENST00000621680 635 ntBASIC0.81□□□□□ -2.28
SPTA1P02549 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC0.81□□□□□ -2.28
SPTA1P02549 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC0.81□□□□□ -2.28
SPTA1P02549 KTN1-214ENST00000554507 2057 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
SPTA1P02549 MIR153-1-201ENST00000384914 90 ntBASIC0.81□□□□□ -2.28
SPTA1P02549 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.81□□□□□ -2.28
SPTA1P02549 RNU4ATAC16P-201ENST00000408512 126 ntBASIC0.81□□□□□ -2.28
SPTA1P02549 RPS20P15-201ENST00000412792 311 ntBASIC0.81□□□□□ -2.28
SPTA1P02549 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC0.81□□□□□ -2.28
SPTA1P02549 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC0.81□□□□□ -2.28
SPTA1P02549 AL356867.1-201ENST00000429623 299 ntBASIC0.81□□□□□ -2.28
SPTA1P02549 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC0.81□□□□□ -2.28
SPTA1P02549 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC0.81□□□□□ -2.28
SPTA1P02549 AC008739.2-201ENST00000597006 317 ntBASIC0.81□□□□□ -2.28
SPTA1P02549 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC0.81□□□□□ -2.28
SPTA1P02549 AC090425.2-201ENST00000608818 501 ntBASIC0.81□□□□□ -2.28
SPTA1P02549 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC0.81□□□□□ -2.28
SPTA1P02549 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC0.8□□□□□ -2.28
SPTA1P02549 SNORA62.1-201ENST00000364287 154 ntBASIC0.8□□□□□ -2.28
SPTA1P02549 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC0.8□□□□□ -2.28
SPTA1P02549 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC0.8□□□□□ -2.28
SPTA1P02549 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC0.8□□□□□ -2.28
SPTA1P02549 AC010301.1-201ENST00000473936 355 ntBASIC0.8□□□□□ -2.28
SPTA1P02549 AC096751.1-202ENST00000502691 1067 ntBASIC0.8□□□□□ -2.28
SPTA1P02549 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC0.8□□□□□ -2.28
SPTA1P02549 AC096745.1-201ENST00000509945 370 ntBASIC0.8□□□□□ -2.28
SPTA1P02549 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC0.8□□□□□ -2.28
SPTA1P02549 AC005786.1-201ENST00000588553 154 ntBASIC0.8□□□□□ -2.28
SPTA1P02549 AC073544.1-201ENST00000600110 1595 ntBASIC0.8□□□□□ -2.28
SPTA1P02549 BNIP3P26-201ENST00000600827 554 ntBASIC0.8□□□□□ -2.28
SPTA1P02549 AC138473.1-201ENST00000605717 526 ntBASIC0.8□□□□□ -2.28
SPTA1P02549 AC243829.6-201ENST00000612652 106 ntBASIC0.8□□□□□ -2.28
SPTA1P02549 AP003122.6-201ENST00000623831 495 ntBASIC0.8□□□□□ -2.28
SPTA1P02549 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC0.8□□□□□ -2.28
SPTA1P02549 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC0.8□□□□□ -2.28
SPTA1P02549 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC0.8□□□□□ -2.28
SPTA1P02549 PTGES3P2-201ENST00000407942 482 ntBASIC0.8□□□□□ -2.28
SPTA1P02549 RNA5SP511-201ENST00000410487 115 ntBASIC0.8□□□□□ -2.28
SPTA1P02549 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC0.8□□□□□ -2.28
SPTA1P02549 AC096632.1-201ENST00000427395 310 ntBASIC0.8□□□□□ -2.28
SPTA1P02549 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC0.8□□□□□ -2.28
SPTA1P02549 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC0.8□□□□□ -2.28
SPTA1P02549 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC0.8□□□□□ -2.28
SPTA1P02549 OR6K5P-201ENST00000447050 945 ntBASIC0.8□□□□□ -2.28
SPTA1P02549 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC0.8□□□□□ -2.28
SPTA1P02549 AC023141.11-201ENST00000508864 202 ntBASIC0.8□□□□□ -2.28
SPTA1P02549 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC0.8□□□□□ -2.28
SPTA1P02549 AC023824.2-201ENST00000566185 400 ntBASIC0.8□□□□□ -2.28
SPTA1P02549 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC0.8□□□□□ -2.28
SPTA1P02549 FAM71BP1-201ENST00000604431 523 ntBASIC0.8□□□□□ -2.28
SPTA1P02549 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC0.8□□□□□ -2.28
SPTA1P02549 HMGB1P24-202ENST00000615653 685 ntBASIC0.8□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms