Protein–RNA interactions for Protein: O95343

SIX3, Homeobox protein SIX3, humanhuman

Predicted RBP Predictions only

Length 332 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3O95343 RNA5SP165-201ENST00000517142 115 ntBASIC2.96□□□□□ -1.94
SIX3O95343 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC2.96□□□□□ -1.94
SIX3O95343 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC2.96□□□□□ -1.94
SIX3O95343 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC2.96□□□□□ -1.94
SIX3O95343 MIR5680-201ENST00000577577 84 ntBASIC2.96□□□□□ -1.94
SIX3O95343 MIR5697-201ENST00000578045 78 ntBASIC2.96□□□□□ -1.94
SIX3O95343 AC092354.1-201ENST00000606057 376 ntBASIC2.96□□□□□ -1.94
SIX3O95343 BX664608.1-201ENST00000610519 487 ntBASIC2.96□□□□□ -1.94
SIX3O95343 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.96□□□□□ -1.94
SIX3O95343 MTND5P19-201ENST00000424872 1794 ntBASIC2.96□□□□□ -1.94
SIX3O95343 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC2.96□□□□□ -1.94
SIX3O95343 AC008264.2-201ENST00000610193 3731 ntBASIC2.96□□□□□ -1.94
SIX3O95343 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
SIX3O95343 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.95□□□□□ -1.94
SIX3O95343 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.95□□□□□ -1.94
SIX3O95343 AL353746.1-201ENST00000566293 6881 ntBASIC2.95□□□□□ -1.94
SIX3O95343 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.95□□□□□ -1.94
SIX3O95343 RNU6-288P-201ENST00000363690 104 ntBASIC2.95□□□□□ -1.94
SIX3O95343 U3.19-201ENST00000390893 196 ntBASIC2.95□□□□□ -1.94
SIX3O95343 RN7SKP220-201ENST00000410611 288 ntBASIC2.95□□□□□ -1.94
SIX3O95343 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC2.95□□□□□ -1.94
SIX3O95343 NDUFB4P5-201ENST00000415445 361 ntBASIC2.95□□□□□ -1.94
SIX3O95343 AC137499.1-201ENST00000427602 88 ntBASIC2.95□□□□□ -1.94
SIX3O95343 ELOCP14-201ENST00000428070 331 ntBASIC2.95□□□□□ -1.94
SIX3O95343 MTND1P28-201ENST00000435623 950 ntBASIC2.95□□□□□ -1.94
SIX3O95343 ELOCP7-201ENST00000439968 331 ntBASIC2.95□□□□□ -1.94
SIX3O95343 USP9YP15-201ENST00000442391 422 ntBASIC2.95□□□□□ -1.94
SIX3O95343 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC2.95□□□□□ -1.94
SIX3O95343 EPS15P1-201ENST00000448836 336 ntBASIC2.95□□□□□ -1.94
SIX3O95343 RPL37P4-201ENST00000448908 268 ntBASIC2.95□□□□□ -1.94
SIX3O95343 AL139824.2-201ENST00000458731 1095 ntBASIC2.95□□□□□ -1.94
SIX3O95343 RNU6-953P-201ENST00000459154 107 ntBASIC2.95□□□□□ -1.94
SIX3O95343 RPL36AP51-201ENST00000487216 318 ntBASIC2.95□□□□□ -1.94
SIX3O95343 RNA5SP471-201ENST00000516971 106 ntBASIC2.95□□□□□ -1.94
SIX3O95343 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC2.95□□□□□ -1.94
SIX3O95343 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC2.95□□□□□ -1.94
SIX3O95343 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC2.95□□□□□ -1.94
SIX3O95343 MTND3P12-201ENST00000559068 328 ntBASIC2.95□□□□□ -1.94
SIX3O95343 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC2.95□□□□□ -1.94
SIX3O95343 ROCK1P1-201ENST00000573767 549 ntBASIC2.95□□□□□ -1.94
SIX3O95343 WISP1-OT1-201ENST00000602893 642 ntBASIC2.95□□□□□ -1.94
SIX3O95343 AC026790.2-201ENST00000606282 430 ntBASIC2.95□□□□□ -1.94
SIX3O95343 RNU6-87P-201ENST00000607561 108 ntBASIC2.95□□□□□ -1.94
SIX3O95343 AC007998.5-201ENST00000622938 237 ntBASIC2.95□□□□□ -1.94
SIX3O95343 AC002064.3-201ENST00000623448 346 ntBASIC2.95□□□□□ -1.94
SIX3O95343 AC026422.1-201ENST00000623961 452 ntBASIC2.95□□□□□ -1.94
SIX3O95343 AC091953.2-201ENST00000623979 160 ntBASIC2.95□□□□□ -1.94
SIX3O95343 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC2.95□□□□□ -1.94
SIX3O95343 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC2.95□□□□□ -1.94
SIX3O95343 PSMD5-AS1-215ENST00000640622 205 ntBASIC2.95□□□□□ -1.94
SIX3O95343 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC2.95□□□□□ -1.94
SIX3O95343 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
SIX3O95343 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
SIX3O95343 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
SIX3O95343 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
SIX3O95343 ATP8A2P3-201ENST00000426792 1536 ntBASIC2.94□□□□□ -1.94
SIX3O95343 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
SIX3O95343 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC2.94□□□□□ -1.94
SIX3O95343 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
SIX3O95343 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC2.94□□□□□ -1.94
SIX3O95343 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
SIX3O95343 RNU6-7-201ENST00000364784 107 ntBASIC2.94□□□□□ -1.94
SIX3O95343 RNU6-8-201ENST00000365467 107 ntBASIC2.94□□□□□ -1.94
SIX3O95343 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.94□□□□□ -1.94
SIX3O95343 RNU4-47P-201ENST00000410876 114 ntBASIC2.94□□□□□ -1.94
SIX3O95343 AL513477.1-202ENST00000417061 214 ntBASIC2.94□□□□□ -1.94
SIX3O95343 SDCBPP3-201ENST00000419629 891 ntBASIC2.94□□□□□ -1.94
SIX3O95343 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC2.94□□□□□ -1.94
SIX3O95343 IGKV1OR-3-201ENST00000446944 348 ntBASIC2.94□□□□□ -1.94
SIX3O95343 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.94□□□□□ -1.94
SIX3O95343 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC2.94□□□□□ -1.94
SIX3O95343 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC2.94□□□□□ -1.94
SIX3O95343 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC2.94□□□□□ -1.94
SIX3O95343 AP004217.1-201ENST00000480579 346 ntBASIC2.94□□□□□ -1.94
SIX3O95343 RPS29P20-201ENST00000489592 171 ntBASIC2.94□□□□□ -1.94
SIX3O95343 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC2.94□□□□□ -1.94
SIX3O95343 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC2.94□□□□□ -1.94
SIX3O95343 AC107934.1-201ENST00000522215 217 ntBASIC2.94□□□□□ -1.94
SIX3O95343 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC2.94□□□□□ -1.94
SIX3O95343 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
SIX3O95343 AC025281.1-201ENST00000567026 265 ntBASIC2.94□□□□□ -1.94
SIX3O95343 MIR4524B-201ENST00000581569 115 ntBASIC2.94□□□□□ -1.94
SIX3O95343 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC2.94□□□□□ -1.94
SIX3O95343 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC2.94□□□□□ -1.94
SIX3O95343 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC2.94□□□□□ -1.94
SIX3O95343 AL022161.1-201ENST00000604390 213 ntBASIC2.94□□□□□ -1.94
SIX3O95343 AL161798.1-201ENST00000604630 131 ntBASIC2.94□□□□□ -1.94
SIX3O95343 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
SIX3O95343 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.94□□□□□ -1.94
SIX3O95343 AC090617.7-201ENST00000623952 126 ntBASIC2.94□□□□□ -1.94
SIX3O95343 AC120349.3-201ENST00000624377 529 ntBASIC2.94□□□□□ -1.94
SIX3O95343 MIR622-201ENST00000638396 96 ntBASIC2.94□□□□□ -1.94
SIX3O95343 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC2.94□□□□□ -1.94
SIX3O95343 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC2.94□□□□□ -1.94
SIX3O95343 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.93□□□□□ -1.94
SIX3O95343 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
SIX3O95343 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
SIX3O95343 AC092435.3-201ENST00000565538 3654 ntBASIC2.93□□□□□ -1.94
SIX3O95343 SNORA54-201ENST00000384281 123 ntBASIC2.93□□□□□ -1.94
SIX3O95343 RNU2-36P-201ENST00000410361 191 ntBASIC2.93□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 173.4 ms