Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 AC009852.2-201ENST00000567898 485 ntBASIC4.88□□□□□ -1.63
SOX1O00570 MIR5685-201ENST00000579080 79 ntBASIC4.88□□□□□ -1.63
SOX1O00570 AL390123.1-201ENST00000603216 237 ntBASIC4.88□□□□□ -1.63
SOX1O00570 AC005000.2-201ENST00000605468 310 ntBASIC4.88□□□□□ -1.63
SOX1O00570 AC006023.2-201ENST00000609916 167 ntBASIC4.88□□□□□ -1.63
SOX1O00570 AC010632.3-201ENST00000611377 369 ntBASIC4.88□□□□□ -1.63
SOX1O00570 AC064801.1-201ENST00000612025 407 ntBASIC4.88□□□□□ -1.63
SOX1O00570 SNORD39.4-201ENST00000620099 78 ntBASIC4.88□□□□□ -1.63
SOX1O00570 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC4.88□□□□□ -1.63
SOX1O00570 TEX41-280ENST00000629185 591 ntTSL 5 BASIC4.88□□□□□ -1.63
SOX1O00570 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC4.88□□□□□ -1.63
SOX1O00570 AL512643.1-201ENST00000635735 524 ntBASIC4.88□□□□□ -1.63
SOX1O00570 AC009093.8-201ENST00000641769 292 ntBASIC4.88□□□□□ -1.63
SOX1O00570 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC4.88□□□□□ -1.63
SOX1O00570 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.88□□□□□ -1.63
SOX1O00570 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC4.88□□□□□ -1.63
SOX1O00570 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC4.88□□□□□ -1.63
SOX1O00570 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.88□□□□□ -1.63
SOX1O00570 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SOX1O00570 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.88□□□□□ -1.63
SOX1O00570 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SOX1O00570 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC4.87□□□□□ -1.63
SOX1O00570 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SOX1O00570 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SOX1O00570 RNU4-44P-201ENST00000363050 141 ntBASIC4.87□□□□□ -1.63
SOX1O00570 RNU6-1249P-201ENST00000363237 111 ntBASIC4.87□□□□□ -1.63
SOX1O00570 Y_RNA.324-201ENST00000365165 102 ntBASIC4.87□□□□□ -1.63
SOX1O00570 RNA5SP22-201ENST00000365393 109 ntBASIC4.87□□□□□ -1.63
SOX1O00570 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
SOX1O00570 CYCSP33-201ENST00000414485 327 ntBASIC4.87□□□□□ -1.63
SOX1O00570 AC063979.1-201ENST00000415539 377 ntBASIC4.87□□□□□ -1.63
SOX1O00570 AL353621.1-201ENST00000418219 243 ntBASIC4.87□□□□□ -1.63
SOX1O00570 AC091286.1-201ENST00000431233 461 ntBASIC4.87□□□□□ -1.63
SOX1O00570 AC090804.1-201ENST00000448870 490 ntBASIC4.87□□□□□ -1.63
SOX1O00570 TRBVB-201ENST00000477100 408 ntBASIC4.87□□□□□ -1.63
SOX1O00570 AC113155.1-201ENST00000511141 769 ntBASIC4.87□□□□□ -1.63
SOX1O00570 RNU6-397P-201ENST00000516226 104 ntBASIC4.87□□□□□ -1.63
SOX1O00570 RNU6-911P-201ENST00000516523 104 ntBASIC4.87□□□□□ -1.63
SOX1O00570 Y_RNA.700-201ENST00000516806 100 ntBASIC4.87□□□□□ -1.63
SOX1O00570 RNU6-570P-201ENST00000517051 105 ntBASIC4.87□□□□□ -1.63
SOX1O00570 RN7SKP234-201ENST00000517173 224 ntBASIC4.87□□□□□ -1.63
SOX1O00570 RNU6-111P-201ENST00000517179 105 ntBASIC4.87□□□□□ -1.63
SOX1O00570 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC4.87□□□□□ -1.63
SOX1O00570 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
SOX1O00570 CPDP1-201ENST00000579660 283 ntBASIC4.87□□□□□ -1.63
SOX1O00570 BDH2P1-201ENST00000602288 736 ntBASIC4.87□□□□□ -1.63
SOX1O00570 AC113403.1-201ENST00000604910 193 ntBASIC4.87□□□□□ -1.63
SOX1O00570 AC012603.1-201ENST00000606424 528 ntBASIC4.87□□□□□ -1.63
SOX1O00570 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
SOX1O00570 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC4.87□□□□□ -1.63
SOX1O00570 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
SOX1O00570 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.87□□□□□ -1.63
SOX1O00570 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
SOX1O00570 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SOX1O00570 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC4.87□□□□□ -1.63
SOX1O00570 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC4.87□□□□□ -1.63
SOX1O00570 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC4.87□□□□□ -1.63
SOX1O00570 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
SOX1O00570 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
SOX1O00570 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
SOX1O00570 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.87□□□□□ -1.63
SOX1O00570 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SOX1O00570 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SOX1O00570 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SOX1O00570 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC4.86□□□□□ -1.63
SOX1O00570 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SOX1O00570 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SOX1O00570 MIR331-201ENST00000362302 94 ntBASIC4.86□□□□□ -1.63
SOX1O00570 RNU6-611P-201ENST00000384276 104 ntBASIC4.86□□□□□ -1.63
SOX1O00570 Y_RNA.534-201ENST00000384599 112 ntBASIC4.86□□□□□ -1.63
SOX1O00570 Z98745.1-201ENST00000402553 494 ntBASIC4.86□□□□□ -1.63
SOX1O00570 AL591034.2-201ENST00000402839 359 ntBASIC4.86□□□□□ -1.63
SOX1O00570 HIST1H2APS3-201ENST00000403259 134 ntBASIC4.86□□□□□ -1.63
SOX1O00570 RNU6-712P-201ENST00000410558 100 ntBASIC4.86□□□□□ -1.63
SOX1O00570 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.86□□□□□ -1.63
SOX1O00570 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SOX1O00570 RPL12P46-201ENST00000436610 195 ntBASIC4.86□□□□□ -1.63
SOX1O00570 CYCSP32-201ENST00000440548 321 ntBASIC4.86□□□□□ -1.63
SOX1O00570 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC4.86□□□□□ -1.63
SOX1O00570 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SOX1O00570 AC008958.1-201ENST00000511047 682 ntBASIC4.86□□□□□ -1.63
SOX1O00570 AC008716.1-201ENST00000511084 513 ntBASIC4.86□□□□□ -1.63
SOX1O00570 RNU6-709P-201ENST00000517257 104 ntBASIC4.86□□□□□ -1.63
SOX1O00570 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC4.86□□□□□ -1.63
SOX1O00570 AC012433.1-201ENST00000588916 398 ntBASIC4.86□□□□□ -1.63
SOX1O00570 U2.22-201ENST00000636441 106 ntBASIC4.86□□□□□ -1.63
SOX1O00570 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SOX1O00570 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC4.86□□□□□ -1.63
SOX1O00570 AC063976.2-201ENST00000425667 3556 ntBASIC4.86□□□□□ -1.63
SOX1O00570 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SOX1O00570 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SOX1O00570 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.86□□□□□ -1.63
SOX1O00570 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SOX1O00570 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
SOX1O00570 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
SOX1O00570 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC4.85□□□□□ -1.63
SOX1O00570 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
SOX1O00570 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SOX1O00570 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC4.85□□□□□ -1.63
SOX1O00570 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 91.3 ms