Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC5.08□□□□□ -1.6
PCDHGA11Q9Y5H2 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
PCDHGA11Q9Y5H2 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.08□□□□□ -1.6
PCDHGA11Q9Y5H2 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC5.08□□□□□ -1.6
PCDHGA11Q9Y5H2 AC233981.2-201ENST00000611524 1614 ntBASIC5.08□□□□□ -1.6
PCDHGA11Q9Y5H2 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC5.08□□□□□ -1.6
PCDHGA11Q9Y5H2 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
PCDHGA11Q9Y5H2 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
PCDHGA11Q9Y5H2 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
PCDHGA11Q9Y5H2 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
PCDHGA11Q9Y5H2 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC5.07□□□□□ -1.6
PCDHGA11Q9Y5H2 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
PCDHGA11Q9Y5H2 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
PCDHGA11Q9Y5H2 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
PCDHGA11Q9Y5H2 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC5.07□□□□□ -1.6
PCDHGA11Q9Y5H2 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
PCDHGA11Q9Y5H2 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
PCDHGA11Q9Y5H2 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
PCDHGA11Q9Y5H2 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
PCDHGA11Q9Y5H2 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.07□□□□□ -1.6
PCDHGA11Q9Y5H2 MIR323A-201ENST00000362199 86 ntBASIC5.07□□□□□ -1.6
PCDHGA11Q9Y5H2 RNU6-545P-201ENST00000362681 104 ntBASIC5.07□□□□□ -1.6
PCDHGA11Q9Y5H2 RNA5SP339-201ENST00000390987 122 ntBASIC5.07□□□□□ -1.6
PCDHGA11Q9Y5H2 AC009804.1-201ENST00000400949 179 ntBASIC5.07□□□□□ -1.6
PCDHGA11Q9Y5H2 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC5.07□□□□□ -1.6
PCDHGA11Q9Y5H2 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC5.07□□□□□ -1.6
PCDHGA11Q9Y5H2 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
PCDHGA11Q9Y5H2 AC006026.2-201ENST00000457376 180 ntBASIC5.07□□□□□ -1.6
PCDHGA11Q9Y5H2 AC005532.2-201ENST00000467154 373 ntBASIC5.07□□□□□ -1.6
PCDHGA11Q9Y5H2 AC139453.3-201ENST00000493276 369 ntBASIC5.07□□□□□ -1.6
PCDHGA11Q9Y5H2 RN7SKP272-201ENST00000516988 232 ntBASIC5.07□□□□□ -1.6
PCDHGA11Q9Y5H2 TRAPPC2P2-201ENST00000517589 409 ntBASIC5.07□□□□□ -1.6
PCDHGA11Q9Y5H2 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC5.07□□□□□ -1.6
PCDHGA11Q9Y5H2 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC5.07□□□□□ -1.6
PCDHGA11Q9Y5H2 RN7SL708P-201ENST00000580952 299 ntBASIC5.07□□□□□ -1.6
PCDHGA11Q9Y5H2 AC053481.4-201ENST00000583164 216 ntBASIC5.07□□□□□ -1.6
PCDHGA11Q9Y5H2 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC5.07□□□□□ -1.6
PCDHGA11Q9Y5H2 U2.14-201ENST00000615943 113 ntBASIC5.07□□□□□ -1.6
PCDHGA11Q9Y5H2 CCT7-217ENST00000626868 249 ntTSL 5 BASIC5.07□□□□□ -1.6
PCDHGA11Q9Y5H2 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC5.07□□□□□ -1.6
PCDHGA11Q9Y5H2 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC5.07□□□□□ -1.6
PCDHGA11Q9Y5H2 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
PCDHGA11Q9Y5H2 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
PCDHGA11Q9Y5H2 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
PCDHGA11Q9Y5H2 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
PCDHGA11Q9Y5H2 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
PCDHGA11Q9Y5H2 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC5.07□□□□□ -1.6
PCDHGA11Q9Y5H2 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
PCDHGA11Q9Y5H2 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
PCDHGA11Q9Y5H2 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.07□□□□□ -1.6
PCDHGA11Q9Y5H2 AC025031.4-201ENST00000621248 3271 ntBASIC5.06□□□□□ -1.6
PCDHGA11Q9Y5H2 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC5.06□□□□□ -1.6
PCDHGA11Q9Y5H2 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC5.06□□□□□ -1.6
PCDHGA11Q9Y5H2 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
PCDHGA11Q9Y5H2 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC5.06□□□□□ -1.6
PCDHGA11Q9Y5H2 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
PCDHGA11Q9Y5H2 RNU4-90P-201ENST00000362773 141 ntBASIC5.06□□□□□ -1.6
PCDHGA11Q9Y5H2 RNU6-774P-201ENST00000363238 107 ntBASIC5.06□□□□□ -1.6
PCDHGA11Q9Y5H2 MIR124-3-201ENST00000384866 87 ntBASIC5.06□□□□□ -1.6
PCDHGA11Q9Y5H2 RNU1-77P-201ENST00000390868 162 ntBASIC5.06□□□□□ -1.6
PCDHGA11Q9Y5H2 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC5.06□□□□□ -1.6
PCDHGA11Q9Y5H2 AC093655.2-201ENST00000425735 631 ntBASIC5.06□□□□□ -1.6
PCDHGA11Q9Y5H2 TOMM22P6-201ENST00000465035 409 ntBASIC5.06□□□□□ -1.6
PCDHGA11Q9Y5H2 KC877373.1-201ENST00000479066 408 ntBASIC5.06□□□□□ -1.6
PCDHGA11Q9Y5H2 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC5.06□□□□□ -1.6
PCDHGA11Q9Y5H2 ENSA-210ENST00000503241 574 ntTSL 3 BASIC5.06□□□□□ -1.6
PCDHGA11Q9Y5H2 RN7SKP276-201ENST00000516242 268 ntBASIC5.06□□□□□ -1.6
PCDHGA11Q9Y5H2 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.06□□□□□ -1.6
PCDHGA11Q9Y5H2 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC5.06□□□□□ -1.6
PCDHGA11Q9Y5H2 AC099506.2-201ENST00000623074 221 ntBASIC5.06□□□□□ -1.6
PCDHGA11Q9Y5H2 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
PCDHGA11Q9Y5H2 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
PCDHGA11Q9Y5H2 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
PCDHGA11Q9Y5H2 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
PCDHGA11Q9Y5H2 Z95331.1-201ENST00000623075 23112 ntBASIC5.06□□□□□ -1.6
PCDHGA11Q9Y5H2 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
PCDHGA11Q9Y5H2 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5.06□□□□□ -1.6
PCDHGA11Q9Y5H2 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
PCDHGA11Q9Y5H2 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC5.06□□□□□ -1.6
PCDHGA11Q9Y5H2 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
PCDHGA11Q9Y5H2 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
PCDHGA11Q9Y5H2 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
PCDHGA11Q9Y5H2 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
PCDHGA11Q9Y5H2 RNU2-20P-201ENST00000410425 191 ntBASIC5.05□□□□□ -1.6
PCDHGA11Q9Y5H2 MAP1LC3BP1-201ENST00000417653 379 ntBASIC5.05□□□□□ -1.6
PCDHGA11Q9Y5H2 AC098614.2-201ENST00000426040 255 ntBASIC5.05□□□□□ -1.6
PCDHGA11Q9Y5H2 Z82188.1-201ENST00000436709 154 ntBASIC5.05□□□□□ -1.6
PCDHGA11Q9Y5H2 snoU13.24-201ENST00000458998 104 ntBASIC5.05□□□□□ -1.6
PCDHGA11Q9Y5H2 snoU109.2-201ENST00000459316 135 ntBASIC5.05□□□□□ -1.6
PCDHGA11Q9Y5H2 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC5.05□□□□□ -1.6
PCDHGA11Q9Y5H2 RPL31P13-201ENST00000484151 370 ntBASIC5.05□□□□□ -1.6
PCDHGA11Q9Y5H2 AL136038.1-201ENST00000497246 351 ntBASIC5.05□□□□□ -1.6
PCDHGA11Q9Y5H2 AC004980.4-201ENST00000513375 203 ntBASIC5.05□□□□□ -1.6
PCDHGA11Q9Y5H2 RNA5SP373-201ENST00000517271 95 ntBASIC5.05□□□□□ -1.6
PCDHGA11Q9Y5H2 AC126177.5-201ENST00000549599 178 ntBASIC5.05□□□□□ -1.6
PCDHGA11Q9Y5H2 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC5.05□□□□□ -1.6
PCDHGA11Q9Y5H2 RPL10P14-201ENST00000565265 298 ntBASIC5.05□□□□□ -1.6
PCDHGA11Q9Y5H2 AC023824.2-201ENST00000566185 400 ntBASIC5.05□□□□□ -1.6
PCDHGA11Q9Y5H2 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC5.05□□□□□ -1.6
PCDHGA11Q9Y5H2 SNORD95-201ENST00000579879 68 ntBASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 123.2 ms