Protein–RNA interactions for Protein: Q9Y3Q4

HCN4, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 4, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN4Q9Y3Q4 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
HCN4Q9Y3Q4 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC5.2□□□□□ -1.58
HCN4Q9Y3Q4 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
HCN4Q9Y3Q4 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
HCN4Q9Y3Q4 MTND5P9-201ENST00000503854 1755 ntBASIC5.19□□□□□ -1.58
HCN4Q9Y3Q4 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC5.19□□□□□ -1.58
HCN4Q9Y3Q4 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
HCN4Q9Y3Q4 Z75746.1-201ENST00000440243 2080 ntBASIC5.19□□□□□ -1.58
HCN4Q9Y3Q4 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.19□□□□□ -1.58
HCN4Q9Y3Q4 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
HCN4Q9Y3Q4 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.19□□□□□ -1.58
HCN4Q9Y3Q4 MIR1182-201ENST00000408363 97 ntBASIC5.19□□□□□ -1.58
HCN4Q9Y3Q4 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC5.19□□□□□ -1.58
HCN4Q9Y3Q4 MYL8P-204ENST00000431574 518 ntBASIC5.19□□□□□ -1.58
HCN4Q9Y3Q4 AL159987.2-201ENST00000432754 307 ntBASIC5.19□□□□□ -1.58
HCN4Q9Y3Q4 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC5.19□□□□□ -1.58
HCN4Q9Y3Q4 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC5.19□□□□□ -1.58
HCN4Q9Y3Q4 AC073465.2-201ENST00000440938 498 ntBASIC5.19□□□□□ -1.58
HCN4Q9Y3Q4 RPL34P20-201ENST00000442771 351 ntBASIC5.19□□□□□ -1.58
HCN4Q9Y3Q4 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
HCN4Q9Y3Q4 PHBP16-201ENST00000446318 950 ntBASIC5.19□□□□□ -1.58
HCN4Q9Y3Q4 RN7SL132P-201ENST00000478131 296 ntBASIC5.19□□□□□ -1.58
HCN4Q9Y3Q4 UBE2Q2P9-201ENST00000490086 202 ntBASIC5.19□□□□□ -1.58
HCN4Q9Y3Q4 RPS24P16-201ENST00000497294 392 ntBASIC5.19□□□□□ -1.58
HCN4Q9Y3Q4 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC5.19□□□□□ -1.58
HCN4Q9Y3Q4 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC5.19□□□□□ -1.58
HCN4Q9Y3Q4 RNU1-45P-201ENST00000517191 141 ntBASIC5.19□□□□□ -1.58
HCN4Q9Y3Q4 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC5.19□□□□□ -1.58
HCN4Q9Y3Q4 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
HCN4Q9Y3Q4 AP001880.2-201ENST00000538233 448 ntBASIC5.19□□□□□ -1.58
HCN4Q9Y3Q4 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC5.19□□□□□ -1.58
HCN4Q9Y3Q4 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC5.19□□□□□ -1.58
HCN4Q9Y3Q4 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC5.19□□□□□ -1.58
HCN4Q9Y3Q4 AC107294.1-201ENST00000609524 467 ntBASIC5.19□□□□□ -1.58
HCN4Q9Y3Q4 AC004792.1-201ENST00000614523 137 ntBASIC5.19□□□□□ -1.58
HCN4Q9Y3Q4 AL445567.2-201ENST00000618935 498 ntBASIC5.19□□□□□ -1.58
HCN4Q9Y3Q4 AC091903.1-201ENST00000624322 454 ntBASIC5.19□□□□□ -1.58
HCN4Q9Y3Q4 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC5.19□□□□□ -1.58
HCN4Q9Y3Q4 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.19□□□□□ -1.58
HCN4Q9Y3Q4 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
HCN4Q9Y3Q4 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC5.19□□□□□ -1.58
HCN4Q9Y3Q4 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
HCN4Q9Y3Q4 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
HCN4Q9Y3Q4 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC5.19□□□□□ -1.58
HCN4Q9Y3Q4 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
HCN4Q9Y3Q4 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
HCN4Q9Y3Q4 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
HCN4Q9Y3Q4 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.18□□□□□ -1.58
HCN4Q9Y3Q4 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC5.18□□□□□ -1.58
HCN4Q9Y3Q4 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.18□□□□□ -1.58
HCN4Q9Y3Q4 AC073136.1-201ENST00000449426 2884 ntBASIC5.18□□□□□ -1.58
HCN4Q9Y3Q4 AC009812.4-201ENST00000569134 1805 ntBASIC5.18□□□□□ -1.58
HCN4Q9Y3Q4 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC5.18□□□□□ -1.58
HCN4Q9Y3Q4 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.18□□□□□ -1.58
HCN4Q9Y3Q4 AC004817.4-201ENST00000602396 3625 ntBASIC5.18□□□□□ -1.58
HCN4Q9Y3Q4 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
HCN4Q9Y3Q4 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
HCN4Q9Y3Q4 AL391987.6-201ENST00000305671 199 ntBASIC5.18□□□□□ -1.58
HCN4Q9Y3Q4 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
HCN4Q9Y3Q4 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC5.18□□□□□ -1.58
HCN4Q9Y3Q4 Y_RNA.27-201ENST00000362540 103 ntBASIC5.18□□□□□ -1.58
HCN4Q9Y3Q4 RN7SKP280-201ENST00000364196 304 ntBASIC5.18□□□□□ -1.58
HCN4Q9Y3Q4 RNU6-395P-201ENST00000365662 106 ntBASIC5.18□□□□□ -1.58
HCN4Q9Y3Q4 SNORA70F-201ENST00000384142 135 ntBASIC5.18□□□□□ -1.58
HCN4Q9Y3Q4 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC5.18□□□□□ -1.58
HCN4Q9Y3Q4 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
HCN4Q9Y3Q4 RPL7AP25-201ENST00000423357 805 ntBASIC5.18□□□□□ -1.58
HCN4Q9Y3Q4 AC004938.1-201ENST00000438468 308 ntBASIC5.18□□□□□ -1.58
HCN4Q9Y3Q4 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC5.18□□□□□ -1.58
HCN4Q9Y3Q4 RN7SL542P-201ENST00000467147 294 ntBASIC5.18□□□□□ -1.58
HCN4Q9Y3Q4 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC5.18□□□□□ -1.58
HCN4Q9Y3Q4 AC074250.1-201ENST00000511117 192 ntBASIC5.18□□□□□ -1.58
HCN4Q9Y3Q4 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC5.18□□□□□ -1.58
HCN4Q9Y3Q4 SNORA31.9-201ENST00000516429 84 ntBASIC5.18□□□□□ -1.58
HCN4Q9Y3Q4 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC5.18□□□□□ -1.58
HCN4Q9Y3Q4 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC5.18□□□□□ -1.58
HCN4Q9Y3Q4 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC5.18□□□□□ -1.58
HCN4Q9Y3Q4 AL157871.3-201ENST00000557231 293 ntBASIC5.18□□□□□ -1.58
HCN4Q9Y3Q4 HNRNPCP4-201ENST00000571636 900 ntBASIC5.18□□□□□ -1.58
HCN4Q9Y3Q4 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC5.18□□□□□ -1.58
HCN4Q9Y3Q4 MIR8076-201ENST00000611401 83 ntBASIC5.18□□□□□ -1.58
HCN4Q9Y3Q4 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
HCN4Q9Y3Q4 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC5.18□□□□□ -1.58
HCN4Q9Y3Q4 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
HCN4Q9Y3Q4 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC5.18□□□□□ -1.58
HCN4Q9Y3Q4 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
HCN4Q9Y3Q4 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
HCN4Q9Y3Q4 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC5.18□□□□□ -1.58
HCN4Q9Y3Q4 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
HCN4Q9Y3Q4 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
HCN4Q9Y3Q4 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
HCN4Q9Y3Q4 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
HCN4Q9Y3Q4 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
HCN4Q9Y3Q4 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
HCN4Q9Y3Q4 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.17□□□□□ -1.58
HCN4Q9Y3Q4 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
HCN4Q9Y3Q4 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
HCN4Q9Y3Q4 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC5.17□□□□□ -1.58
HCN4Q9Y3Q4 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.17□□□□□ -1.58
HCN4Q9Y3Q4 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 10 ms